Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NPIPB4C9JG80 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPIPB4C9JG80 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.12■■□□□ 1.29
NPIPB4C9JG80 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.11■■□□□ 1.29
NPIPB4C9JG80 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPIPB4C9JG80 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPIPB4C9JG80 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
NPIPB4C9JG80 MIR3665-201ENST00000578708 105 ntBASIC23.1■■□□□ 1.29
NPIPB4C9JG80 DUX4L28-201ENST00000623687 678 ntBASIC23.1■■□□□ 1.29
NPIPB4C9JG80 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
NPIPB4C9JG80 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPIPB4C9JG80 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
NPIPB4C9JG80 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.09■■□□□ 1.29
NPIPB4C9JG80 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NPIPB4C9JG80 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
NPIPB4C9JG80 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.08■■□□□ 1.29
NPIPB4C9JG80 AC108673.1-201ENST00000510422 1159 ntBASIC23.08■■□□□ 1.29
NPIPB4C9JG80 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.08■■□□□ 1.29
NPIPB4C9JG80 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.08■■□□□ 1.28
NPIPB4C9JG80 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NPIPB4C9JG80 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.07■■□□□ 1.28
NPIPB4C9JG80 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
NPIPB4C9JG80 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NPIPB4C9JG80 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.07■■□□□ 1.28
NPIPB4C9JG80 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.07■■□□□ 1.28
NPIPB4C9JG80 AC142086.6-201ENST00000621154 1765 ntBASIC23.06■■□□□ 1.28
NPIPB4C9JG80 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NPIPB4C9JG80 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NPIPB4C9JG80 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.05■■□□□ 1.28
NPIPB4C9JG80 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
NPIPB4C9JG80 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPIPB4C9JG80 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
NPIPB4C9JG80 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.04■■□□□ 1.28
NPIPB4C9JG80 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
NPIPB4C9JG80 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NPIPB4C9JG80 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
NPIPB4C9JG80 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NPIPB4C9JG80 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.02■■□□□ 1.28
NPIPB4C9JG80 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
NPIPB4C9JG80 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPIPB4C9JG80 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.02■■□□□ 1.28
NPIPB4C9JG80 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NPIPB4C9JG80 DRD5P2-201ENST00000421395 2012 ntBASIC23.02■■□□□ 1.28
NPIPB4C9JG80 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPIPB4C9JG80 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPIPB4C9JG80 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPIPB4C9JG80 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.01■■□□□ 1.27
NPIPB4C9JG80 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NPIPB4C9JG80 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPIPB4C9JG80 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23■■□□□ 1.27
NPIPB4C9JG80 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPIPB4C9JG80 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
NPIPB4C9JG80 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPIPB4C9JG80 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPIPB4C9JG80 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
NPIPB4C9JG80 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.98■■□□□ 1.27
NPIPB4C9JG80 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.98■■□□□ 1.27
NPIPB4C9JG80 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPIPB4C9JG80 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPIPB4C9JG80 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPIPB4C9JG80 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.96■■□□□ 1.27
NPIPB4C9JG80 MIR6090-201ENST00000622481 60 ntBASIC22.96■■□□□ 1.27
NPIPB4C9JG80 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.96■■□□□ 1.27
NPIPB4C9JG80 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.96■■□□□ 1.27
NPIPB4C9JG80 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
NPIPB4C9JG80 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.95■■□□□ 1.26
NPIPB4C9JG80 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
NPIPB4C9JG80 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NPIPB4C9JG80 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
NPIPB4C9JG80 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NPIPB4C9JG80 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NPIPB4C9JG80 AC087741.3-201ENST00000624270 1347 ntBASIC22.93■■□□□ 1.26
NPIPB4C9JG80 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.93■■□□□ 1.26
NPIPB4C9JG80 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NPIPB4C9JG80 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NPIPB4C9JG80 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
NPIPB4C9JG80 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.92■■□□□ 1.26
NPIPB4C9JG80 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NPIPB4C9JG80 AL162393.1-201ENST00000437852 946 ntBASIC22.91■■□□□ 1.26
NPIPB4C9JG80 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
NPIPB4C9JG80 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
NPIPB4C9JG80 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.9■■□□□ 1.26
NPIPB4C9JG80 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.9■■□□□ 1.26
NPIPB4C9JG80 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
NPIPB4C9JG80 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.9■■□□□ 1.26
NPIPB4C9JG80 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.9■■□□□ 1.26
NPIPB4C9JG80 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
NPIPB4C9JG80 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
NPIPB4C9JG80 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.89■■□□□ 1.25
NPIPB4C9JG80 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NPIPB4C9JG80 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NPIPB4C9JG80 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NPIPB4C9JG80 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NPIPB4C9JG80 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
NPIPB4C9JG80 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NPIPB4C9JG80 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
NPIPB4C9JG80 LINC00273-201ENST00000539813 1452 ntBASIC22.88■■□□□ 1.25
NPIPB4C9JG80 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.88■■□□□ 1.25
NPIPB4C9JG80 AC135983.2-203ENST00000454486 1613 ntBASIC22.88■■□□□ 1.25
NPIPB4C9JG80 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms