Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TRIM6-TRIM34B2RNG4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.75■■■□□ 2.67
TRIM6-TRIM34B2RNG4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
TRIM6-TRIM34B2RNG4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.74■■■□□ 2.67
TRIM6-TRIM34B2RNG4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.73■■■□□ 2.67
TRIM6-TRIM34B2RNG4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
TRIM6-TRIM34B2RNG4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.73■■■□□ 2.67
TRIM6-TRIM34B2RNG4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
TRIM6-TRIM34B2RNG4 AC127502.1-201ENST00000399971 1502 ntBASIC31.72■■■□□ 2.67
TRIM6-TRIM34B2RNG4 AL162393.1-201ENST00000437852 946 ntBASIC31.72■■■□□ 2.67
TRIM6-TRIM34B2RNG4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.71■■■□□ 2.67
TRIM6-TRIM34B2RNG4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.71■■■□□ 2.67
TRIM6-TRIM34B2RNG4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
TRIM6-TRIM34B2RNG4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
TRIM6-TRIM34B2RNG4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TRIM6-TRIM34B2RNG4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.68■■■□□ 2.66
TRIM6-TRIM34B2RNG4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
TRIM6-TRIM34B2RNG4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
TRIM6-TRIM34B2RNG4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TRIM6-TRIM34B2RNG4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TRIM6-TRIM34B2RNG4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
TRIM6-TRIM34B2RNG4 AC108673.1-201ENST00000510422 1159 ntBASIC31.64■■■□□ 2.66
TRIM6-TRIM34B2RNG4 MIR6090-201ENST00000622481 60 ntBASIC31.64■■■□□ 2.66
TRIM6-TRIM34B2RNG4 AC087741.3-201ENST00000624270 1347 ntBASIC31.64■■■□□ 2.66
TRIM6-TRIM34B2RNG4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TRIM6-TRIM34B2RNG4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
TRIM6-TRIM34B2RNG4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
TRIM6-TRIM34B2RNG4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TRIM6-TRIM34B2RNG4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
TRIM6-TRIM34B2RNG4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM6-TRIM34B2RNG4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM6-TRIM34B2RNG4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
TRIM6-TRIM34B2RNG4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TRIM6-TRIM34B2RNG4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
TRIM6-TRIM34B2RNG4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM6-TRIM34B2RNG4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
TRIM6-TRIM34B2RNG4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
TRIM6-TRIM34B2RNG4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
TRIM6-TRIM34B2RNG4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
TRIM6-TRIM34B2RNG4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
TRIM6-TRIM34B2RNG4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
TRIM6-TRIM34B2RNG4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.55■■■□□ 2.64
TRIM6-TRIM34B2RNG4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
TRIM6-TRIM34B2RNG4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
TRIM6-TRIM34B2RNG4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
TRIM6-TRIM34B2RNG4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.52■■■□□ 2.64
TRIM6-TRIM34B2RNG4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM6-TRIM34B2RNG4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
TRIM6-TRIM34B2RNG4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM6-TRIM34B2RNG4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TRIM6-TRIM34B2RNG4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TRIM6-TRIM34B2RNG4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.51■■■□□ 2.63
TRIM6-TRIM34B2RNG4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
TRIM6-TRIM34B2RNG4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TRIM6-TRIM34B2RNG4 AC044849.2-201ENST00000606596 710 ntBASIC31.5■■■□□ 2.63
TRIM6-TRIM34B2RNG4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM6-TRIM34B2RNG4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM6-TRIM34B2RNG4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TRIM6-TRIM34B2RNG4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.48■■■□□ 2.63
TRIM6-TRIM34B2RNG4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.48■■■□□ 2.63
TRIM6-TRIM34B2RNG4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
TRIM6-TRIM34B2RNG4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TRIM6-TRIM34B2RNG4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.47■■■□□ 2.63
TRIM6-TRIM34B2RNG4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
TRIM6-TRIM34B2RNG4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TRIM6-TRIM34B2RNG4 RPS2P35-201ENST00000443417 897 ntBASIC31.46■■■□□ 2.63
TRIM6-TRIM34B2RNG4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
TRIM6-TRIM34B2RNG4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TRIM6-TRIM34B2RNG4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TRIM6-TRIM34B2RNG4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.45■■■□□ 2.63
TRIM6-TRIM34B2RNG4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.45■■■□□ 2.63
TRIM6-TRIM34B2RNG4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.45■■■□□ 2.62
TRIM6-TRIM34B2RNG4 AP004833.2-201ENST00000532228 1454 ntBASIC31.44■■■□□ 2.62
TRIM6-TRIM34B2RNG4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.43■■■□□ 2.62
TRIM6-TRIM34B2RNG4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM6-TRIM34B2RNG4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM6-TRIM34B2RNG4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.41■■■□□ 2.62
TRIM6-TRIM34B2RNG4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.41■■■□□ 2.62
TRIM6-TRIM34B2RNG4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TRIM6-TRIM34B2RNG4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
TRIM6-TRIM34B2RNG4 DRD5P2-201ENST00000421395 2012 ntBASIC31.41■■■□□ 2.62
TRIM6-TRIM34B2RNG4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
TRIM6-TRIM34B2RNG4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
TRIM6-TRIM34B2RNG4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.39■■■□□ 2.62
TRIM6-TRIM34B2RNG4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
TRIM6-TRIM34B2RNG4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.38■■■□□ 2.61
TRIM6-TRIM34B2RNG4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRIM6-TRIM34B2RNG4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
TRIM6-TRIM34B2RNG4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRIM6-TRIM34B2RNG4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM6-TRIM34B2RNG4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM6-TRIM34B2RNG4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM6-TRIM34B2RNG4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.37■■■□□ 2.61
TRIM6-TRIM34B2RNG4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM6-TRIM34B2RNG4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM6-TRIM34B2RNG4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM6-TRIM34B2RNG4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.35■■■□□ 2.61
TRIM6-TRIM34B2RNG4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
TRIM6-TRIM34B2RNG4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TRIM6-TRIM34B2RNG4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms