Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.79■■□□□ 1.88
SHISA7A6NL88 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
SHISA7A6NL88 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
SHISA7A6NL88 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SHISA7A6NL88 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SHISA7A6NL88 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.78■■□□□ 1.88
SHISA7A6NL88 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
SHISA7A6NL88 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.77■■□□□ 1.88
SHISA7A6NL88 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SHISA7A6NL88 RNF126P1-201ENST00000567452 1320 ntBASIC26.77■■□□□ 1.88
SHISA7A6NL88 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
SHISA7A6NL88 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
SHISA7A6NL88 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
SHISA7A6NL88 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.76■■□□□ 1.88
SHISA7A6NL88 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.76■■□□□ 1.88
SHISA7A6NL88 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
SHISA7A6NL88 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
SHISA7A6NL88 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SHISA7A6NL88 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
SHISA7A6NL88 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.74■■□□□ 1.87
SHISA7A6NL88 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.74■■□□□ 1.87
SHISA7A6NL88 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SHISA7A6NL88 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.73■■□□□ 1.87
SHISA7A6NL88 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SHISA7A6NL88 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.73■■□□□ 1.87
SHISA7A6NL88 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.73■■□□□ 1.87
SHISA7A6NL88 AL161658.1-201ENST00000623641 1967 ntBASIC26.73■■□□□ 1.87
SHISA7A6NL88 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SHISA7A6NL88 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SHISA7A6NL88 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.71■■□□□ 1.87
SHISA7A6NL88 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.71■■□□□ 1.87
SHISA7A6NL88 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SHISA7A6NL88 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SHISA7A6NL88 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.68■■□□□ 1.86
SHISA7A6NL88 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.68■■□□□ 1.86
SHISA7A6NL88 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SHISA7A6NL88 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SHISA7A6NL88 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SHISA7A6NL88 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SHISA7A6NL88 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SHISA7A6NL88 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SHISA7A6NL88 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SHISA7A6NL88 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SHISA7A6NL88 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
SHISA7A6NL88 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
SHISA7A6NL88 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SHISA7A6NL88 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
SHISA7A6NL88 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.64■■□□□ 1.86
SHISA7A6NL88 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SHISA7A6NL88 AC010864.1-201ENST00000609407 1511 ntBASIC26.64■■□□□ 1.85
SHISA7A6NL88 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SHISA7A6NL88 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SHISA7A6NL88 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.62■■□□□ 1.85
SHISA7A6NL88 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SHISA7A6NL88 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SHISA7A6NL88 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
SHISA7A6NL88 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SHISA7A6NL88 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
SHISA7A6NL88 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SHISA7A6NL88 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
SHISA7A6NL88 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.6■■□□□ 1.85
SHISA7A6NL88 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SHISA7A6NL88 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.59■■□□□ 1.85
SHISA7A6NL88 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SHISA7A6NL88 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
SHISA7A6NL88 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.58■■□□□ 1.85
SHISA7A6NL88 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SHISA7A6NL88 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SHISA7A6NL88 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SHISA7A6NL88 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SHISA7A6NL88 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
SHISA7A6NL88 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SHISA7A6NL88 AC022413.1-201ENST00000624602 984 ntBASIC26.57■■□□□ 1.84
SHISA7A6NL88 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
SHISA7A6NL88 NTF6A-201ENST00000591175 560 ntBASIC26.56■■□□□ 1.84
SHISA7A6NL88 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SHISA7A6NL88 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.55■■□□□ 1.84
SHISA7A6NL88 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SHISA7A6NL88 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.54■■□□□ 1.84
SHISA7A6NL88 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
SHISA7A6NL88 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.54■■□□□ 1.84
SHISA7A6NL88 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SHISA7A6NL88 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
SHISA7A6NL88 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.52■■□□□ 1.84
SHISA7A6NL88 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SHISA7A6NL88 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHISA7A6NL88 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHISA7A6NL88 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SHISA7A6NL88 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SHISA7A6NL88 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.49■■□□□ 1.83
SHISA7A6NL88 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SHISA7A6NL88 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SHISA7A6NL88 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SHISA7A6NL88 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.47■■□□□ 1.83
SHISA7A6NL88 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SHISA7A6NL88 AC012354.3-201ENST00000623734 483 ntBASIC26.47■■□□□ 1.83
SHISA7A6NL88 WHAMMP2-203ENST00000563942 1603 ntBASIC26.47■■□□□ 1.83
SHISA7A6NL88 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHISA7A6NL88 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHISA7A6NL88 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms