Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC39.01■■■■□ 3.83
HFM1A2PYH4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC39.01■■■■□ 3.83
HFM1A2PYH4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
HFM1A2PYH4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC38.98■■■■□ 3.83
HFM1A2PYH4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC38.97■■■■□ 3.83
HFM1A2PYH4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC38.97■■■■□ 3.83
HFM1A2PYH4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
HFM1A2PYH4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC38.96■■■■□ 3.83
HFM1A2PYH4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC38.93■■■■□ 3.82
HFM1A2PYH4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC38.93■■■■□ 3.82
HFM1A2PYH4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC38.92■■■■□ 3.82
HFM1A2PYH4 DUX4L11-201ENST00000611504 1267 ntBASIC38.92■■■■□ 3.82
HFM1A2PYH4 DUX4L12-201ENST00000614593 1267 ntBASIC38.92■■■■□ 3.82
HFM1A2PYH4 DUX4L14-201ENST00000621227 1267 ntBASIC38.92■■■■□ 3.82
HFM1A2PYH4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
HFM1A2PYH4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC38.9■■■■□ 3.82
HFM1A2PYH4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
HFM1A2PYH4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC38.89■■■■□ 3.82
HFM1A2PYH4 CR559946.2-201ENST00000623684 991 ntBASIC38.89■■■■□ 3.82
HFM1A2PYH4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
HFM1A2PYH4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
HFM1A2PYH4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC38.88■■■■□ 3.81
HFM1A2PYH4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC38.87■■■■□ 3.81
HFM1A2PYH4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC38.85■■■■□ 3.81
HFM1A2PYH4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC38.85■■■■□ 3.81
HFM1A2PYH4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC38.85■■■■□ 3.81
HFM1A2PYH4 AC135983.2-203ENST00000454486 1613 ntBASIC38.85■■■■□ 3.81
HFM1A2PYH4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC38.85■■■■□ 3.81
HFM1A2PYH4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC38.85■■■■□ 3.81
HFM1A2PYH4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC38.84■■■■□ 3.81
HFM1A2PYH4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC38.84■■■■□ 3.81
HFM1A2PYH4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC38.84■■■■□ 3.81
HFM1A2PYH4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC38.83■■■■□ 3.81
HFM1A2PYH4 HLA-V-202ENST00000446817 847 ntBASIC38.83■■■■□ 3.81
HFM1A2PYH4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC38.83■■■■□ 3.81
HFM1A2PYH4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC38.81■■■■□ 3.8
HFM1A2PYH4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC38.81■■■■□ 3.8
HFM1A2PYH4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC38.81■■■■□ 3.8
HFM1A2PYH4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC38.8■■■■□ 3.8
HFM1A2PYH4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC38.8■■■■□ 3.8
HFM1A2PYH4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
HFM1A2PYH4 WHAMMP2-203ENST00000563942 1603 ntBASIC38.78■■■■□ 3.8
HFM1A2PYH4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
HFM1A2PYH4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC38.78■■■■□ 3.8
HFM1A2PYH4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC38.77■■■■□ 3.8
HFM1A2PYH4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
HFM1A2PYH4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
HFM1A2PYH4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
HFM1A2PYH4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC38.76■■■■□ 3.8
HFM1A2PYH4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC38.76■■■■□ 3.8
HFM1A2PYH4 MIR3648-2-201ENST00000581792 180 ntBASIC38.76■■■■□ 3.8
HFM1A2PYH4 MIR3648-1-201ENST00000615959 180 ntBASIC38.76■■■■□ 3.8
HFM1A2PYH4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.79
HFM1A2PYH4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC38.76■■■■□ 3.79
HFM1A2PYH4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC38.76■■■■□ 3.79
HFM1A2PYH4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC38.75■■■■□ 3.79
HFM1A2PYH4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC38.75■■■■□ 3.79
HFM1A2PYH4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC38.75■■■■□ 3.79
HFM1A2PYH4 DUX4L13-201ENST00000554103 1267 ntBASIC38.75■■■■□ 3.79
HFM1A2PYH4 DUX4L15-201ENST00000611059 1267 ntBASIC38.75■■■■□ 3.79
HFM1A2PYH4 DUX4L23-201ENST00000615195 1269 ntBASIC38.75■■■■□ 3.79
HFM1A2PYH4 DUX4L24-201ENST00000617576 1269 ntBASIC38.75■■■■□ 3.79
HFM1A2PYH4 DUX4L22-201ENST00000618238 1269 ntBASIC38.75■■■■□ 3.79
HFM1A2PYH4 DUX4L20-201ENST00000619712 1269 ntBASIC38.75■■■■□ 3.79
HFM1A2PYH4 DUX4L21-201ENST00000622058 1269 ntBASIC38.75■■■■□ 3.79
HFM1A2PYH4 DUX4L10-201ENST00000622460 1267 ntBASIC38.75■■■■□ 3.79
HFM1A2PYH4 DUX4L25-201ENST00000624915 1269 ntBASIC38.75■■■■□ 3.79
HFM1A2PYH4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC38.75■■■■□ 3.79
HFM1A2PYH4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC38.74■■■■□ 3.79
HFM1A2PYH4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
HFM1A2PYH4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
HFM1A2PYH4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC38.73■■■■□ 3.79
HFM1A2PYH4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC38.73■■■■□ 3.79
HFM1A2PYH4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
HFM1A2PYH4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
HFM1A2PYH4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC38.73■■■■□ 3.79
HFM1A2PYH4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC38.72■■■■□ 3.79
HFM1A2PYH4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
HFM1A2PYH4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC38.72■■■■□ 3.79
HFM1A2PYH4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
HFM1A2PYH4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC38.71■■■■□ 3.79
HFM1A2PYH4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC38.69■■■■□ 3.78
HFM1A2PYH4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC38.69■■■■□ 3.78
HFM1A2PYH4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
HFM1A2PYH4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC38.67■■■■□ 3.78
HFM1A2PYH4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
HFM1A2PYH4 AC016575.1-201ENST00000607026 382 ntBASIC38.67■■■■□ 3.78
HFM1A2PYH4 CHML-204ENST00000638121 920 ntTSL 2 BASIC38.67■■■■□ 3.78
HFM1A2PYH4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC38.66■■■■□ 3.78
HFM1A2PYH4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC38.66■■■■□ 3.78
HFM1A2PYH4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC38.65■■■■□ 3.78
HFM1A2PYH4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
HFM1A2PYH4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC38.64■■■■□ 3.78
HFM1A2PYH4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC38.64■■■■□ 3.78
HFM1A2PYH4 ABCB10P1-201ENST00000614297 2181 ntBASIC38.63■■■■□ 3.78
HFM1A2PYH4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC38.63■■■■□ 3.78
HFM1A2PYH4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
HFM1A2PYH4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC38.63■■■■□ 3.77
HFM1A2PYH4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
HFM1A2PYH4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC38.62■■■■□ 3.77
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms