Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SSC5DA1L4H1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.1■■■□□ 2.57
SSC5DA1L4H1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
SSC5DA1L4H1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
SSC5DA1L4H1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SSC5DA1L4H1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.07■■■□□ 2.56
SSC5DA1L4H1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.07■■■□□ 2.56
SSC5DA1L4H1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
SSC5DA1L4H1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SSC5DA1L4H1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.05■■■□□ 2.56
SSC5DA1L4H1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.05■■■□□ 2.56
SSC5DA1L4H1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
SSC5DA1L4H1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SSC5DA1L4H1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.04■■■□□ 2.56
SSC5DA1L4H1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.04■■■□□ 2.56
SSC5DA1L4H1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SSC5DA1L4H1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
SSC5DA1L4H1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.03■■■□□ 2.56
SSC5DA1L4H1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
SSC5DA1L4H1 RNF126P1-201ENST00000567452 1320 ntBASIC31.02■■■□□ 2.56
SSC5DA1L4H1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.01■■■□□ 2.56
SSC5DA1L4H1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.01■■■□□ 2.55
SSC5DA1L4H1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
SSC5DA1L4H1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.55
SSC5DA1L4H1 AL161658.1-201ENST00000623641 1967 ntBASIC31.01■■■□□ 2.55
SSC5DA1L4H1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31■■■□□ 2.55
SSC5DA1L4H1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31■■■□□ 2.55
SSC5DA1L4H1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.99■■■□□ 2.55
SSC5DA1L4H1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.98■■■□□ 2.55
SSC5DA1L4H1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.98■■■□□ 2.55
SSC5DA1L4H1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SSC5DA1L4H1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SSC5DA1L4H1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SSC5DA1L4H1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SSC5DA1L4H1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SSC5DA1L4H1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SSC5DA1L4H1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.94■■■□□ 2.54
SSC5DA1L4H1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SSC5DA1L4H1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SSC5DA1L4H1 AC010864.1-201ENST00000609407 1511 ntBASIC30.94■■■□□ 2.54
SSC5DA1L4H1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SSC5DA1L4H1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SSC5DA1L4H1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.92■■■□□ 2.54
SSC5DA1L4H1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SSC5DA1L4H1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
SSC5DA1L4H1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SSC5DA1L4H1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.91■■■□□ 2.54
SSC5DA1L4H1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.9■■■□□ 2.54
SSC5DA1L4H1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SSC5DA1L4H1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SSC5DA1L4H1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SSC5DA1L4H1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SSC5DA1L4H1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SSC5DA1L4H1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SSC5DA1L4H1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
SSC5DA1L4H1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SSC5DA1L4H1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.87■■■□□ 2.53
SSC5DA1L4H1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SSC5DA1L4H1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.86■■■□□ 2.53
SSC5DA1L4H1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SSC5DA1L4H1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SSC5DA1L4H1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
SSC5DA1L4H1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SSC5DA1L4H1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
SSC5DA1L4H1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
SSC5DA1L4H1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SSC5DA1L4H1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.84■■■□□ 2.53
SSC5DA1L4H1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
SSC5DA1L4H1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.83■■■□□ 2.53
SSC5DA1L4H1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
SSC5DA1L4H1 NTF6A-201ENST00000591175 560 ntBASIC30.83■■■□□ 2.53
SSC5DA1L4H1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SSC5DA1L4H1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SSC5DA1L4H1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
SSC5DA1L4H1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SSC5DA1L4H1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.79■■■□□ 2.52
SSC5DA1L4H1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.79■■■□□ 2.52
SSC5DA1L4H1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
SSC5DA1L4H1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
SSC5DA1L4H1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.78■■■□□ 2.52
SSC5DA1L4H1 AC022413.1-201ENST00000624602 984 ntBASIC30.78■■■□□ 2.52
SSC5DA1L4H1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
SSC5DA1L4H1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SSC5DA1L4H1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.77■■■□□ 2.52
SSC5DA1L4H1 AC012354.3-201ENST00000623734 483 ntBASIC30.75■■■□□ 2.51
SSC5DA1L4H1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SSC5DA1L4H1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SSC5DA1L4H1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
SSC5DA1L4H1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SSC5DA1L4H1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
SSC5DA1L4H1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.74■■■□□ 2.51
SSC5DA1L4H1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SSC5DA1L4H1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
SSC5DA1L4H1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
SSC5DA1L4H1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SSC5DA1L4H1 WHAMMP2-203ENST00000563942 1603 ntBASIC30.73■■■□□ 2.51
SSC5DA1L4H1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.72■■■□□ 2.51
SSC5DA1L4H1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.72■■■□□ 2.51
SSC5DA1L4H1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SSC5DA1L4H1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms