Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-4A0A0B4J246 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV8-4A0A0B4J246 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.83■□□□□ 0.44
TRAV8-4A0A0B4J246 AC097358.2-201ENST00000607541 1159 ntBASIC17.83■□□□□ 0.44
TRAV8-4A0A0B4J246 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV8-4A0A0B4J246 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-4A0A0B4J246 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-4A0A0B4J246 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-4A0A0B4J246 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-4A0A0B4J246 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRAV8-4A0A0B4J246 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TRAV8-4A0A0B4J246 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-4A0A0B4J246 AL391121.1-201ENST00000607967 1349 ntBASIC17.81■□□□□ 0.44
TRAV8-4A0A0B4J246 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-4A0A0B4J246 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-4A0A0B4J246 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-4A0A0B4J246 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-4A0A0B4J246 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-4A0A0B4J246 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV8-4A0A0B4J246 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV8-4A0A0B4J246 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRAV8-4A0A0B4J246 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV8-4A0A0B4J246 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV8-4A0A0B4J246 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV8-4A0A0B4J246 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV8-4A0A0B4J246 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-4A0A0B4J246 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-4A0A0B4J246 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRAV8-4A0A0B4J246 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-4A0A0B4J246 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV8-4A0A0B4J246 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRAV8-4A0A0B4J246 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV8-4A0A0B4J246 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV8-4A0A0B4J246 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV8-4A0A0B4J246 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV8-4A0A0B4J246 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV8-4A0A0B4J246 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
TRAV8-4A0A0B4J246 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-4A0A0B4J246 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAV8-4A0A0B4J246 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-4A0A0B4J246 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-4A0A0B4J246 AC136428.2-201ENST00000563187 214 ntBASIC17.76■□□□□ 0.43
TRAV8-4A0A0B4J246 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
TRAV8-4A0A0B4J246 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-4A0A0B4J246 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-4A0A0B4J246 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV8-4A0A0B4J246 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-4A0A0B4J246 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRAV8-4A0A0B4J246 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-4A0A0B4J246 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRAV8-4A0A0B4J246 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV8-4A0A0B4J246 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV8-4A0A0B4J246 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-4A0A0B4J246 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-4A0A0B4J246 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV8-4A0A0B4J246 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRAV8-4A0A0B4J246 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRAV8-4A0A0B4J246 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAV8-4A0A0B4J246 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TRAV8-4A0A0B4J246 CAHM-201ENST00000604200 896 ntBASIC17.73■□□□□ 0.43
TRAV8-4A0A0B4J246 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV8-4A0A0B4J246 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV8-4A0A0B4J246 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV8-4A0A0B4J246 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV8-4A0A0B4J246 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV8-4A0A0B4J246 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
TRAV8-4A0A0B4J246 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRAV8-4A0A0B4J246 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV8-4A0A0B4J246 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV8-4A0A0B4J246 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV8-4A0A0B4J246 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV8-4A0A0B4J246 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
TRAV8-4A0A0B4J246 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
TRAV8-4A0A0B4J246 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.7■□□□□ 0.42
TRAV8-4A0A0B4J246 AC010864.1-201ENST00000609407 1511 ntBASIC17.7■□□□□ 0.42
TRAV8-4A0A0B4J246 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV8-4A0A0B4J246 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV8-4A0A0B4J246 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV8-4A0A0B4J246 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV8-4A0A0B4J246 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAV8-4A0A0B4J246 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV8-4A0A0B4J246 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRAV8-4A0A0B4J246 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV8-4A0A0B4J246 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV8-4A0A0B4J246 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRAV8-4A0A0B4J246 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAV8-4A0A0B4J246 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV8-4A0A0B4J246 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-4A0A0B4J246 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-4A0A0B4J246 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-4A0A0B4J246 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRAV8-4A0A0B4J246 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-4A0A0B4J246 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-4A0A0B4J246 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-4A0A0B4J246 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV8-4A0A0B4J246 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRAV8-4A0A0B4J246 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-4A0A0B4J246 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-4A0A0B4J246 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-4A0A0B4J246 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms