Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV10A0A0B4J240 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV10A0A0B4J240 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV10A0A0B4J240 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV10A0A0B4J240 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV10A0A0B4J240 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV10A0A0B4J240 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV10A0A0B4J240 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV10A0A0B4J240 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV10A0A0B4J240 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV10A0A0B4J240 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV10A0A0B4J240 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV10A0A0B4J240 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.36■□□□□ 0.53
TRAV10A0A0B4J240 LINC00273-201ENST00000539813 1452 ntBASIC18.35■□□□□ 0.53
TRAV10A0A0B4J240 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV10A0A0B4J240 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TRAV10A0A0B4J240 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV10A0A0B4J240 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV10A0A0B4J240 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV10A0A0B4J240 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV10A0A0B4J240 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV10A0A0B4J240 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV10A0A0B4J240 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV10A0A0B4J240 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.32■□□□□ 0.52
TRAV10A0A0B4J240 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV10A0A0B4J240 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV10A0A0B4J240 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
TRAV10A0A0B4J240 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV10A0A0B4J240 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV10A0A0B4J240 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRAV10A0A0B4J240 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV10A0A0B4J240 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TRAV10A0A0B4J240 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV10A0A0B4J240 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV10A0A0B4J240 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV10A0A0B4J240 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRAV10A0A0B4J240 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TRAV10A0A0B4J240 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV10A0A0B4J240 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV10A0A0B4J240 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV10A0A0B4J240 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV10A0A0B4J240 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV10A0A0B4J240 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV10A0A0B4J240 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV10A0A0B4J240 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV10A0A0B4J240 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV10A0A0B4J240 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TRAV10A0A0B4J240 AL135925.1-201ENST00000605920 1701 ntBASIC18.26■□□□□ 0.51
TRAV10A0A0B4J240 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.26■□□□□ 0.51
TRAV10A0A0B4J240 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV10A0A0B4J240 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV10A0A0B4J240 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV10A0A0B4J240 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV10A0A0B4J240 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAV10A0A0B4J240 AC127502.1-201ENST00000399971 1502 ntBASIC18.25■□□□□ 0.51
TRAV10A0A0B4J240 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV10A0A0B4J240 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRAV10A0A0B4J240 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
TRAV10A0A0B4J240 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRAV10A0A0B4J240 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV10A0A0B4J240 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV10A0A0B4J240 ST7-205ENST00000393446 2114 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV10A0A0B4J240 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV10A0A0B4J240 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV10A0A0B4J240 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV10A0A0B4J240 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
TRAV10A0A0B4J240 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV10A0A0B4J240 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRAV10A0A0B4J240 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV10A0A0B4J240 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV10A0A0B4J240 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV10A0A0B4J240 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV10A0A0B4J240 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV10A0A0B4J240 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRAV10A0A0B4J240 ST7-202ENST00000323984 2142 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV10A0A0B4J240 ST7-207ENST00000393449 2127 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV10A0A0B4J240 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV10A0A0B4J240 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRAV10A0A0B4J240 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV10A0A0B4J240 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.19■□□□□ 0.5
TRAV10A0A0B4J240 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV10A0A0B4J240 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV10A0A0B4J240 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV10A0A0B4J240 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV10A0A0B4J240 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.18■□□□□ 0.5
TRAV10A0A0B4J240 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV10A0A0B4J240 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV10A0A0B4J240 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV10A0A0B4J240 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.17■□□□□ 0.5
TRAV10A0A0B4J240 HSD17B1P1-201ENST00000590052 955 ntBASIC18.17■□□□□ 0.5
TRAV10A0A0B4J240 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV10A0A0B4J240 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV10A0A0B4J240 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV10A0A0B4J240 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV10A0A0B4J240 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV10A0A0B4J240 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRAV10A0A0B4J240 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV10A0A0B4J240 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRAV10A0A0B4J240 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV10A0A0B4J240 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms