Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 AC127502.1-201ENST00000399971 1502 ntBASIC21.16■□□□□ 0.98
SAA2-SAA4A0A096LPE2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SAA2-SAA4A0A096LPE2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SAA2-SAA4A0A096LPE2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SAA2-SAA4A0A096LPE2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SAA2-SAA4A0A096LPE2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
SAA2-SAA4A0A096LPE2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.14■□□□□ 0.98
SAA2-SAA4A0A096LPE2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
SAA2-SAA4A0A096LPE2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SAA2-SAA4A0A096LPE2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.13■□□□□ 0.97
SAA2-SAA4A0A096LPE2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SAA2-SAA4A0A096LPE2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SAA2-SAA4A0A096LPE2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SAA2-SAA4A0A096LPE2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.12■□□□□ 0.97
SAA2-SAA4A0A096LPE2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SAA2-SAA4A0A096LPE2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SAA2-SAA4A0A096LPE2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SAA2-SAA4A0A096LPE2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SAA2-SAA4A0A096LPE2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.11■□□□□ 0.97
SAA2-SAA4A0A096LPE2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SAA2-SAA4A0A096LPE2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SAA2-SAA4A0A096LPE2 DRD5P2-201ENST00000421395 2012 ntBASIC21.1■□□□□ 0.97
SAA2-SAA4A0A096LPE2 AC142086.6-201ENST00000621154 1765 ntBASIC21.1■□□□□ 0.97
SAA2-SAA4A0A096LPE2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SAA2-SAA4A0A096LPE2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
SAA2-SAA4A0A096LPE2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SAA2-SAA4A0A096LPE2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.09■□□□□ 0.97
SAA2-SAA4A0A096LPE2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SAA2-SAA4A0A096LPE2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SAA2-SAA4A0A096LPE2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SAA2-SAA4A0A096LPE2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SAA2-SAA4A0A096LPE2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.09■□□□□ 0.97
SAA2-SAA4A0A096LPE2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.09■□□□□ 0.97
SAA2-SAA4A0A096LPE2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SAA2-SAA4A0A096LPE2 AP004833.2-201ENST00000532228 1454 ntBASIC21.08■□□□□ 0.97
SAA2-SAA4A0A096LPE2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SAA2-SAA4A0A096LPE2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SAA2-SAA4A0A096LPE2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
SAA2-SAA4A0A096LPE2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.08■□□□□ 0.97
SAA2-SAA4A0A096LPE2 DUX4L28-201ENST00000623687 678 ntBASIC21.08■□□□□ 0.97
SAA2-SAA4A0A096LPE2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.08■□□□□ 0.96
SAA2-SAA4A0A096LPE2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SAA2-SAA4A0A096LPE2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SAA2-SAA4A0A096LPE2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.07■□□□□ 0.96
SAA2-SAA4A0A096LPE2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.07■□□□□ 0.96
SAA2-SAA4A0A096LPE2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.07■□□□□ 0.96
SAA2-SAA4A0A096LPE2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SAA2-SAA4A0A096LPE2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SAA2-SAA4A0A096LPE2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
SAA2-SAA4A0A096LPE2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SAA2-SAA4A0A096LPE2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.05■□□□□ 0.96
SAA2-SAA4A0A096LPE2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SAA2-SAA4A0A096LPE2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SAA2-SAA4A0A096LPE2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SAA2-SAA4A0A096LPE2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.05■□□□□ 0.96
SAA2-SAA4A0A096LPE2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SAA2-SAA4A0A096LPE2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SAA2-SAA4A0A096LPE2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SAA2-SAA4A0A096LPE2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SAA2-SAA4A0A096LPE2 MIR3665-201ENST00000578708 105 ntBASIC21.04■□□□□ 0.96
SAA2-SAA4A0A096LPE2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.04■□□□□ 0.96
SAA2-SAA4A0A096LPE2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.03■□□□□ 0.96
SAA2-SAA4A0A096LPE2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SAA2-SAA4A0A096LPE2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SAA2-SAA4A0A096LPE2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.03■□□□□ 0.96
SAA2-SAA4A0A096LPE2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SAA2-SAA4A0A096LPE2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SAA2-SAA4A0A096LPE2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SAA2-SAA4A0A096LPE2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SAA2-SAA4A0A096LPE2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SAA2-SAA4A0A096LPE2 AP006261.1-201ENST00000584783 668 ntBASIC21.02■□□□□ 0.96
SAA2-SAA4A0A096LPE2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SAA2-SAA4A0A096LPE2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SAA2-SAA4A0A096LPE2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SAA2-SAA4A0A096LPE2 AC108673.1-201ENST00000510422 1159 ntBASIC21.01■□□□□ 0.95
SAA2-SAA4A0A096LPE2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SAA2-SAA4A0A096LPE2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.01■□□□□ 0.95
SAA2-SAA4A0A096LPE2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SAA2-SAA4A0A096LPE2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SAA2-SAA4A0A096LPE2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21■□□□□ 0.95
SAA2-SAA4A0A096LPE2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21■□□□□ 0.95
SAA2-SAA4A0A096LPE2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SAA2-SAA4A0A096LPE2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SAA2-SAA4A0A096LPE2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21■□□□□ 0.95
SAA2-SAA4A0A096LPE2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.99■□□□□ 0.95
SAA2-SAA4A0A096LPE2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SAA2-SAA4A0A096LPE2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SAA2-SAA4A0A096LPE2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SAA2-SAA4A0A096LPE2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.99■□□□□ 0.95
SAA2-SAA4A0A096LPE2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SAA2-SAA4A0A096LPE2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SAA2-SAA4A0A096LPE2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SAA2-SAA4A0A096LPE2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SAA2-SAA4A0A096LPE2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SAA2-SAA4A0A096LPE2 MIR6090-201ENST00000622481 60 ntBASIC20.97■□□□□ 0.95
SAA2-SAA4A0A096LPE2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.97■□□□□ 0.95
SAA2-SAA4A0A096LPE2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.97■□□□□ 0.95
SAA2-SAA4A0A096LPE2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SAA2-SAA4A0A096LPE2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SAA2-SAA4A0A096LPE2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms