Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TBC1D3EA0A087X179 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.07■■□□□ 1.76
TBC1D3EA0A087X179 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
TBC1D3EA0A087X179 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
TBC1D3EA0A087X179 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.06■■□□□ 1.76
TBC1D3EA0A087X179 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.06■■□□□ 1.76
TBC1D3EA0A087X179 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.06■■□□□ 1.76
TBC1D3EA0A087X179 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TBC1D3EA0A087X179 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TBC1D3EA0A087X179 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TBC1D3EA0A087X179 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TBC1D3EA0A087X179 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
TBC1D3EA0A087X179 LINC00273-201ENST00000539813 1452 ntBASIC26.04■■□□□ 1.76
TBC1D3EA0A087X179 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.04■■□□□ 1.76
TBC1D3EA0A087X179 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TBC1D3EA0A087X179 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.02■■□□□ 1.76
TBC1D3EA0A087X179 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.02■■□□□ 1.76
TBC1D3EA0A087X179 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TBC1D3EA0A087X179 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TBC1D3EA0A087X179 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.01■■□□□ 1.75
TBC1D3EA0A087X179 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
TBC1D3EA0A087X179 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
TBC1D3EA0A087X179 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26■■□□□ 1.75
TBC1D3EA0A087X179 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26■■□□□ 1.75
TBC1D3EA0A087X179 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TBC1D3EA0A087X179 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
TBC1D3EA0A087X179 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
TBC1D3EA0A087X179 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
TBC1D3EA0A087X179 AL135925.1-201ENST00000605920 1701 ntBASIC25.98■■□□□ 1.75
TBC1D3EA0A087X179 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TBC1D3EA0A087X179 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.97■■□□□ 1.75
TBC1D3EA0A087X179 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.97■■□□□ 1.75
TBC1D3EA0A087X179 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.97■■□□□ 1.75
TBC1D3EA0A087X179 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TBC1D3EA0A087X179 AC127502.1-201ENST00000399971 1502 ntBASIC25.95■■□□□ 1.74
TBC1D3EA0A087X179 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
TBC1D3EA0A087X179 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.94■■□□□ 1.74
TBC1D3EA0A087X179 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D3EA0A087X179 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
TBC1D3EA0A087X179 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.92■■□□□ 1.74
TBC1D3EA0A087X179 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
TBC1D3EA0A087X179 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
TBC1D3EA0A087X179 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
TBC1D3EA0A087X179 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.91■■□□□ 1.74
TBC1D3EA0A087X179 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.9■■□□□ 1.74
TBC1D3EA0A087X179 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
TBC1D3EA0A087X179 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TBC1D3EA0A087X179 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.9■■□□□ 1.74
TBC1D3EA0A087X179 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TBC1D3EA0A087X179 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
TBC1D3EA0A087X179 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.88■■□□□ 1.73
TBC1D3EA0A087X179 HSD17B1P1-201ENST00000590052 955 ntBASIC25.87■■□□□ 1.73
TBC1D3EA0A087X179 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TBC1D3EA0A087X179 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
TBC1D3EA0A087X179 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TBC1D3EA0A087X179 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
TBC1D3EA0A087X179 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
TBC1D3EA0A087X179 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
TBC1D3EA0A087X179 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.85■■□□□ 1.73
TBC1D3EA0A087X179 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
TBC1D3EA0A087X179 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
TBC1D3EA0A087X179 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.84■■□□□ 1.73
TBC1D3EA0A087X179 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TBC1D3EA0A087X179 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
TBC1D3EA0A087X179 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TBC1D3EA0A087X179 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TBC1D3EA0A087X179 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.82■■□□□ 1.72
TBC1D3EA0A087X179 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
TBC1D3EA0A087X179 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
TBC1D3EA0A087X179 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TBC1D3EA0A087X179 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TBC1D3EA0A087X179 AC135983.2-203ENST00000454486 1613 ntBASIC25.81■■□□□ 1.72
TBC1D3EA0A087X179 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.81■■□□□ 1.72
TBC1D3EA0A087X179 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TBC1D3EA0A087X179 WHAMMP2-203ENST00000563942 1603 ntBASIC25.81■■□□□ 1.72
TBC1D3EA0A087X179 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
TBC1D3EA0A087X179 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TBC1D3EA0A087X179 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TBC1D3EA0A087X179 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.8■■□□□ 1.72
TBC1D3EA0A087X179 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TBC1D3EA0A087X179 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TBC1D3EA0A087X179 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TBC1D3EA0A087X179 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
TBC1D3EA0A087X179 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
TBC1D3EA0A087X179 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
TBC1D3EA0A087X179 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.79■■□□□ 1.72
TBC1D3EA0A087X179 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
TBC1D3EA0A087X179 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
TBC1D3EA0A087X179 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TBC1D3EA0A087X179 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.78■■□□□ 1.72
TBC1D3EA0A087X179 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.78■■□□□ 1.72
TBC1D3EA0A087X179 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.78■■□□□ 1.72
TBC1D3EA0A087X179 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.78■■□□□ 1.72
TBC1D3EA0A087X179 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TBC1D3EA0A087X179 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
TBC1D3EA0A087X179 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TBC1D3EA0A087X179 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
TBC1D3EA0A087X179 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TBC1D3EA0A087X179 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TBC1D3EA0A087X179 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms