Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.78■□□□□ 0.92
RFX6Q8HWS3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.78■□□□□ 0.92
RFX6Q8HWS3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.78■□□□□ 0.92
RFX6Q8HWS3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.78■□□□□ 0.92
RFX6Q8HWS3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RFX6Q8HWS3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.78■□□□□ 0.92
RFX6Q8HWS3 AC010980.2-201ENST00000587099 1412 ntBASIC20.78■□□□□ 0.92
RFX6Q8HWS3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
RFX6Q8HWS3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFX6Q8HWS3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 AC093787.1-201ENST00000450396 207 ntBASIC20.77■□□□□ 0.92
RFX6Q8HWS3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 AC080038.1-201ENST00000611274 1154 ntBASIC20.77■□□□□ 0.92
RFX6Q8HWS3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFX6Q8HWS3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RFX6Q8HWS3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 PTBP1P-201ENST00000554374 1601 ntBASIC20.75■□□□□ 0.91
RFX6Q8HWS3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 AC073111.5-205ENST00000641717 521 ntBASIC20.75■□□□□ 0.91
RFX6Q8HWS3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.75■□□□□ 0.91
RFX6Q8HWS3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 KRT8P17-201ENST00000453110 1448 ntBASIC20.74■□□□□ 0.91
RFX6Q8HWS3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 AL589743.5-201ENST00000616611 1050 ntBASIC20.74■□□□□ 0.91
RFX6Q8HWS3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFX6Q8HWS3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms