RNA–Protein interactions for RNA: ENST00000375431.8

GRTP1-203, Transcript of growth hormone regulated TBC protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GRTP1, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRTP1-203ENST00000375431 NISCHQ9Y2I1 1504 aa50.67■■■■■ 5.7
GRTP1-203ENST00000375431 CCDC180Q9P1Z9 1646 aa45.16■■■■■ 4.82
GRTP1-203ENST00000375431 ABCC9O60706 1549 aa44.31■■■■■ 4.68
GRTP1-203ENST00000375431 RB1CC1Q8TDY2 1594 aa42.58■■■■■ 4.41
GRTP1-203ENST00000375431 NACADO15069 1562 aa42.5■■■■■ 4.39
GRTP1-203ENST00000375431 DCAF8L2P0C7V8 631 aa42.29■■■■■ 4.36
GRTP1-203ENST00000375431 MYO15BQ96JP2 1530 aa42.23■■■■■ 4.35
GRTP1-203ENST00000375431 ZCCHC6Q5VYS8 1495 aaKnown RBP42.19■■■■■ 4.34
GRTP1-203ENST00000375431 DCAF1Q9Y4B6 1507 aa41.96■■■■■ 4.31
GRTP1-203ENST00000375431 UNC13AQ9UPW8 1703 aa41.57■■■■■ 4.25
GRTP1-203ENST00000375431 PABPN1Q86U42 306 aaKnown RBP eCLIP41.35■■■■■ 4.21
GRTP1-203ENST00000375431 BICRAQ9NZM4 1560 aa41.32■■■■■ 4.2
GRTP1-203ENST00000375431 SCRIBQ14160 1630 aa41.12■■■■■ 4.17
GRTP1-203ENST00000375431 SHROOM4Q9ULL8 1493 aa40.93■■■■■ 4.14
GRTP1-203ENST00000375431 DNAJC5BQ9UF47 199 aa40.86■■■■■ 4.13
GRTP1-203ENST00000375431 EIF4G1Q04637 1599 aaKnown RBP40.23■■■■■ 4.03
GRTP1-203ENST00000375431 CC2D2AQ9P2K1 1620 aa40.1■■■■■ 4.01
GRTP1-203ENST00000375431 CECR2Q9BXF3 1484 aa39.87■■■■□ 3.97
GRTP1-203ENST00000375431 SMARCA4P51532 1647 aa39.36■■■■□ 3.89
GRTP1-203ENST00000375431 BAZ1AQ9NRL2 1556 aaPredicted RBP39.29■■■■□ 3.88
GRTP1-203ENST00000375431 NCAPD3P42695 1498 aa39.24■■■■□ 3.87
GRTP1-203ENST00000375431 ATAD2BQ9ULI0 1458 aa39.2■■■■□ 3.87
GRTP1-203ENST00000375431 SMARCA2P51531 1590 aa39.15■■■■□ 3.86
GRTP1-203ENST00000375431 HMGXB3Q12766 1538 aa39.03■■■■□ 3.84
GRTP1-203ENST00000375431 MROH2BQ7Z745 1585 aa39.03■■■■□ 3.84
GRTP1-203ENST00000375431 PEG3Q9GZU2 1588 aa39.03■■■■□ 3.84
GRTP1-203ENST00000375431 BAZ1BQ9UIG0 1483 aaKnown RBP38.85■■■■□ 3.81
GRTP1-203ENST00000375431 WIZO95785 1651 aa38.57■■■■□ 3.77
GRTP1-203ENST00000375431 RSF1Q96T23 1441 aaPredicted RBP38.52■■■■□ 3.76
GRTP1-203ENST00000375431 NESP48681 1621 aa38.3■■■■□ 3.72
GRTP1-203ENST00000375431 ERCC6Q03468 1493 aa38.22■■■■□ 3.71
GRTP1-203ENST00000375431 LAMC3Q9Y6N6 1575 aa38.22■■■■□ 3.71
GRTP1-203ENST00000375431 TOP2AP11388 1531 aaKnown RBP38.2■■■■□ 3.71
GRTP1-203ENST00000375431 CADPSQ9ULU8 1353 aa38.06■■■■□ 3.68
GRTP1-203ENST00000375431 PDS5BQ9NTI5 1447 aa37.95■■■■□ 3.67
GRTP1-203ENST00000375431 CUX2O14529 1486 aa37.94■■■■□ 3.66
GRTP1-203ENST00000375431 KIF21AQ7Z4S6 1674 aa37.84■■■■□ 3.65
GRTP1-203ENST00000375431 THOC2Q8NI27 1593 aaKnown RBP37.8■■■■□ 3.64
GRTP1-203ENST00000375431 CFTRP13569 1480 aa37.8■■■■□ 3.64
GRTP1-203ENST00000375431 CCDC88BA6NC98 1476 aa37.73■■■■□ 3.63
GRTP1-203ENST00000375431 FANCD2Q9BXW9 1451 aa37.61■■■■□ 3.61
GRTP1-203ENST00000375431 MRC2Q9UBG0 1479 aa37.58■■■■□ 3.61
GRTP1-203ENST00000375431 CEP164Q9UPV0 1460 aa37.58■■■■□ 3.61
GRTP1-203ENST00000375431 WDR62O43379 1518 aa37.48■■■■□ 3.59
GRTP1-203ENST00000375431 PRDM2Q13029 1718 aa37.46■■■■□ 3.59
GRTP1-203ENST00000375431 SUPT5HO00267 1087 aaKnown RBP37.29■■■■□ 3.56
GRTP1-203ENST00000375431 URB2Q14146 1524 aaKnown RBP37.25■■■■□ 3.55
GRTP1-203ENST00000375431 ABCC8Q09428 1581 aa36.99■■■■□ 3.51
GRTP1-203ENST00000375431 DNAJC5Q9H3Z4 198 aa36.99■■■■□ 3.51
GRTP1-203ENST00000375431 TOPBP1Q92547 1522 aa36.99■■■■□ 3.51
GRTP1-203ENST00000375431 DNMBPQ6XZF7 1577 aa36.94■■■■□ 3.5
GRTP1-203ENST00000375431 IFT140Q96RY7 1462 aa36.81■■■■□ 3.48
GRTP1-203ENST00000375431 POLA1P09884 1462 aaPredicted RBP36.67■■■■□ 3.46
GRTP1-203ENST00000375431 ZNF608Q9ULD9 1512 aaPredicted RBP36.64■■■■□ 3.46
GRTP1-203ENST00000375431 CUX1P39880 1505 aa36.63■■■■□ 3.45
GRTP1-203ENST00000375431 TARBP1Q13395 1621 aaKnown RBP36.62■■■■□ 3.45
GRTP1-203ENST00000375431 FGD5Q6ZNL6 1462 aa36.53■■■■□ 3.44
GRTP1-203ENST00000375431 EIF4G3O43432 1585 aaKnown RBP36.5■■■■□ 3.43
GRTP1-203ENST00000375431 SOGA1O94964 1423 aa36.49■■■■□ 3.43
GRTP1-203ENST00000375431 RAD54L2Q9Y4B4 1467 aa36.48■■■■□ 3.43
GRTP1-203ENST00000375431 AQRO60306 1485 aaKnown RBP eCLIP36.41■■■■□ 3.421e-7■■■■□ 20.5
GRTP1-203ENST00000375431 WDR97A6NE52 1622 aa36.35■■■■□ 3.41
GRTP1-203ENST00000375431 WRNQ14191 1432 aaPredicted RBP eCLIP36.31■■■■□ 3.4
GRTP1-203ENST00000375431 TDRD9Q8NDG6 1382 aaKnown RBP36.29■■■■□ 3.4
GRTP1-203ENST00000375431 OSCARQ8IYS5 282 aa36.28■■■■□ 3.4
GRTP1-203ENST00000375431 TOP2BQ02880 1626 aa36.28■■■■□ 3.4
GRTP1-203ENST00000375431 BIVM-ERCC5R4GMW8 1640 aa36.28■■■■□ 3.4
GRTP1-203ENST00000375431 SYNJ1O43426 1573 aa36.23■■■■□ 3.39
GRTP1-203ENST00000375431 ABCA10Q8WWZ4 1543 aa36.2■■■■□ 3.39
GRTP1-203ENST00000375431 GRIN2BQ13224 1484 aa36.11■■■■□ 3.37
GRTP1-203ENST00000375431 GAPVD1Q14C86 1478 aa36.08■■■■□ 3.37
GRTP1-203ENST00000375431 SNAPC4Q5SXM2 1469 aa36.08■■■■□ 3.37
GRTP1-203ENST00000375431 ABCA5Q8WWZ7 1642 aa36.07■■■■□ 3.37
GRTP1-203ENST00000375431 CHD1O14646 1710 aa36.05■■■■□ 3.36
GRTP1-203ENST00000375431 MAGI1Q96QZ7 1491 aaPredicted RBP36.05■■■■□ 3.36
GRTP1-203ENST00000375431 PBRM1Q86U86 1689 aa36■■■■□ 3.35
GRTP1-203ENST00000375431 FBLN2P98095 1184 aa35.95■■■■□ 3.35
GRTP1-203ENST00000375431 SYNJ2O15056 1496 aa35.91■■■■□ 3.34
GRTP1-203ENST00000375431 CHMP7Q8WUX9 453 aaPredicted RBP35.86■■■■□ 3.33
GRTP1-203ENST00000375431 ERICH3Q5RHP9 1530 aa35.76■■■■□ 3.32
GRTP1-203ENST00000375431 RIMBP3CA6NJZ7 1639 aa35.74■■■■□ 3.31
GRTP1-203ENST00000375431 RIMBP3BA6NNM3 1639 aa35.74■■■■□ 3.31
GRTP1-203ENST00000375431 RIMBP3Q9UFD9 1639 aa35.74■■■■□ 3.31
GRTP1-203ENST00000375431 ARHGEF11O15085 1522 aa35.73■■■■□ 3.31
GRTP1-203ENST00000375431 ADAMTS12P58397 1594 aa35.73■■■■□ 3.31
GRTP1-203ENST00000375431 CLASP1Q7Z460 1538 aa35.72■■■■□ 3.31
GRTP1-203ENST00000375431 FHAD1B1AJZ9 1412 aa35.66■■■■□ 3.3
GRTP1-203ENST00000375431 GRIN2AQ12879 1464 aa35.64■■■■□ 3.3
GRTP1-203ENST00000375431 TRIM41Q8WV44 630 aa35.62■■■■□ 3.29
GRTP1-203ENST00000375431 KIF27Q86VH2 1401 aa35.58■■■■□ 3.29
GRTP1-203ENST00000375431 NUP160Q12769 1436 aa35.52■■■■□ 3.28
GRTP1-203ENST00000375431 CEP170Q5SW79 1584 aa35.47■■■■□ 3.27
GRTP1-203ENST00000375431 IGF1RP08069 1367 aa35.45■■■■□ 3.27
GRTP1-203ENST00000375431 ARAP1Q96P48 1450 aa35.43■■■■□ 3.26
GRTP1-203ENST00000375431 CUL7Q14999 1698 aa35.38■■■■□ 3.25
GRTP1-203ENST00000375431 CYB5RLQ6IPT4 315 aa35.35■■■■□ 3.25
GRTP1-203ENST00000375431 SHROOM2Q13796 1616 aa35.27■■■■□ 3.24
GRTP1-203ENST00000375431 CARMIL1Q5VZK9 1371 aa35.23■■■■□ 3.23
GRTP1-203ENST00000375431 RUSC2Q8N2Y8 1516 aa35.22■■■■□ 3.23
GRTP1-203ENST00000375431 ERCC6L2Q5T890 1561 aa35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms