RNA–Protein interactions for RNA: ENST00000554374.2

PTBP1P-201, Transcript of polypyrimidine tract binding protein 1 pseudogene, humanhuman

BASIC

Gene PTBP1P, Length 1,601 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1P-201ENST00000554374 NISCHQ9Y2I1 1504 aa47.39■■■■■ 5.18
PTBP1P-201ENST00000554374 CCDC180Q9P1Z9 1646 aa41.73■■■■■ 4.27
PTBP1P-201ENST00000554374 ABCC9O60706 1549 aa39.84■■■■□ 3.97
PTBP1P-201ENST00000554374 ZCCHC6Q5VYS8 1495 aaKnown RBP39.71■■■■□ 3.95
PTBP1P-201ENST00000554374 DCAF1Q9Y4B6 1507 aa39.25■■■■□ 3.87
PTBP1P-201ENST00000554374 MYO15BQ96JP2 1530 aa39.05■■■■□ 3.84
PTBP1P-201ENST00000554374 DCAF8L2P0C7V8 631 aa39■■■■□ 3.83
PTBP1P-201ENST00000554374 NACADO15069 1562 aa38.95■■■■□ 3.83
PTBP1P-201ENST00000554374 RB1CC1Q8TDY2 1594 aa38.74■■■■□ 3.79
PTBP1P-201ENST00000554374 SCRIBQ14160 1630 aa38.14■■■■□ 3.7
PTBP1P-201ENST00000554374 UNC13AQ9UPW8 1703 aa38.08■■■■□ 3.69
PTBP1P-201ENST00000554374 SHROOM4Q9ULL8 1493 aa37.97■■■■□ 3.67
PTBP1P-201ENST00000554374 BICRAQ9NZM4 1560 aa37.67■■■■□ 3.62
PTBP1P-201ENST00000554374 PABPN1Q86U42 306 aaKnown RBP eCLIP37.36■■■■□ 3.57
PTBP1P-201ENST00000554374 CECR2Q9BXF3 1484 aa36.84■■■■□ 3.49
PTBP1P-201ENST00000554374 BAZ1AQ9NRL2 1556 aaPredicted RBP36.63■■■■□ 3.45
PTBP1P-201ENST00000554374 SMARCA4P51532 1647 aa36.59■■■■□ 3.45
PTBP1P-201ENST00000554374 MROH2BQ7Z745 1585 aa36.58■■■■□ 3.45
PTBP1P-201ENST00000554374 EIF4G1Q04637 1599 aaKnown RBP36.52■■■■□ 3.44
PTBP1P-201ENST00000554374 RSF1Q96T23 1441 aaPredicted RBP36.48■■■■□ 3.43
PTBP1P-201ENST00000554374 WIZO95785 1651 aa36.25■■■■□ 3.39
PTBP1P-201ENST00000554374 PEG3Q9GZU2 1588 aa36.24■■■■□ 3.39
PTBP1P-201ENST00000554374 SUPT5HO00267 1087 aaKnown RBP36.16■■■■□ 3.38
PTBP1P-201ENST00000554374 CC2D2AQ9P2K1 1620 aa36.14■■■■□ 3.38
PTBP1P-201ENST00000554374 ATAD2BQ9ULI0 1458 aa36.11■■■■□ 3.37
PTBP1P-201ENST00000554374 SMARCA2P51531 1590 aa36.08■■■■□ 3.37
PTBP1P-201ENST00000554374 NCAPD3P42695 1498 aa35.93■■■■□ 3.34
PTBP1P-201ENST00000554374 TOP2AP11388 1531 aaKnown RBP35.87■■■■□ 3.33
PTBP1P-201ENST00000554374 HMGXB3Q12766 1538 aa35.87■■■■□ 3.33
PTBP1P-201ENST00000554374 BAZ1BQ9UIG0 1483 aaKnown RBP35.82■■■■□ 3.33
PTBP1P-201ENST00000554374 DNAJC5BQ9UF47 199 aa35.75■■■■□ 3.31
PTBP1P-201ENST00000554374 CCDC88BA6NC98 1476 aa35.44■■■■□ 3.26
PTBP1P-201ENST00000554374 CFTRP13569 1480 aa34.95■■■■□ 3.19
PTBP1P-201ENST00000554374 CADPSQ9ULU8 1353 aa34.89■■■■□ 3.18
PTBP1P-201ENST00000554374 PRDM2Q13029 1718 aa34.86■■■■□ 3.17
PTBP1P-201ENST00000554374 LAMC3Q9Y6N6 1575 aa34.83■■■■□ 3.17
PTBP1P-201ENST00000554374 NESP48681 1621 aa34.83■■■■□ 3.17
PTBP1P-201ENST00000554374 FANCD2Q9BXW9 1451 aa34.52■■■■□ 3.12
PTBP1P-201ENST00000554374 KIF21AQ7Z4S6 1674 aa34.49■■■■□ 3.11
PTBP1P-201ENST00000554374 ABCC8Q09428 1581 aa34.48■■■■□ 3.11
PTBP1P-201ENST00000554374 PDS5BQ9NTI5 1447 aa34.48■■■■□ 3.11
PTBP1P-201ENST00000554374 CHIC1Q5VXU3 224 aa34.37■■■■□ 3.09
PTBP1P-201ENST00000554374 CEP164Q9UPV0 1460 aa34.37■■■■□ 3.09
PTBP1P-201ENST00000554374 WRNQ14191 1432 aaPredicted RBP eCLIP34.31■■■■□ 3.08
PTBP1P-201ENST00000554374 SYNJ1O43426 1573 aa34.27■■■■□ 3.08
PTBP1P-201ENST00000554374 CUX1P39880 1505 aa34.26■■■■□ 3.07
PTBP1P-201ENST00000554374 BIVM-ERCC5R4GMW8 1640 aa34.22■■■■□ 3.07
PTBP1P-201ENST00000554374 TOP2BQ02880 1626 aa34.2■■■■□ 3.07
PTBP1P-201ENST00000554374 ERCC6Q03468 1493 aa34.18■■■■□ 3.06
PTBP1P-201ENST00000554374 URB2Q14146 1524 aaKnown RBP34.18■■■■□ 3.06
PTBP1P-201ENST00000554374 DNMBPQ6XZF7 1577 aa34.15■■■■□ 3.06
PTBP1P-201ENST00000554374 MRC2Q9UBG0 1479 aa34.13■■■■□ 3.05
PTBP1P-201ENST00000554374 THOC2Q8NI27 1593 aaKnown RBP34.12■■■■□ 3.05
PTBP1P-201ENST00000554374 TOPBP1Q92547 1522 aa34.11■■■■□ 3.05
PTBP1P-201ENST00000554374 TRIM41Q8WV44 630 aa34.07■■■■□ 3.04
PTBP1P-201ENST00000554374 WDR62O43379 1518 aa34.04■■■■□ 3.04
PTBP1P-201ENST00000554374 FGD5Q6ZNL6 1462 aa33.94■■■■□ 3.02
PTBP1P-201ENST00000554374 POLA1P09884 1462 aaPredicted RBP33.89■■■■□ 3.02
PTBP1P-201ENST00000554374 CUX2O14529 1486 aa33.77■■■■□ 3
PTBP1P-201ENST00000554374 TARBP1Q13395 1621 aaKnown RBP33.73■■■□□ 2.99
PTBP1P-201ENST00000554374 RAD54L2Q9Y4B4 1467 aa33.73■■■□□ 2.99
PTBP1P-201ENST00000554374 WDR97A6NE52 1622 aa33.72■■■□□ 2.99
PTBP1P-201ENST00000554374 SOGA1O94964 1423 aa33.7■■■□□ 2.98
PTBP1P-201ENST00000554374 ABCA10Q8WWZ4 1543 aa33.66■■■□□ 2.98
PTBP1P-201ENST00000554374 RUSC2Q8N2Y8 1516 aa33.6■■■□□ 2.97
PTBP1P-201ENST00000554374 IFT140Q96RY7 1462 aa33.59■■■□□ 2.97
PTBP1P-201ENST00000554374 ABCA5Q8WWZ7 1642 aa33.5■■■□□ 2.95
PTBP1P-201ENST00000554374 KIF27Q86VH2 1401 aa33.48■■■□□ 2.95
PTBP1P-201ENST00000554374 EEA1Q15075 1411 aa33.47■■■□□ 2.95
PTBP1P-201ENST00000554374 ZNF608Q9ULD9 1512 aaPredicted RBP33.44■■■□□ 2.94
PTBP1P-201ENST00000554374 TDRD9Q8NDG6 1382 aaKnown RBP33.41■■■□□ 2.94
PTBP1P-201ENST00000554374 EIF4G3O43432 1585 aaKnown RBP33.37■■■□□ 2.93
PTBP1P-201ENST00000554374 FAM9AQ8IZU1 332 aaPredicted RBP33.37■■■□□ 2.93
PTBP1P-201ENST00000554374 GAPVD1Q14C86 1478 aa33.35■■■□□ 2.93
PTBP1P-201ENST00000554374 AQRO60306 1485 aaKnown RBP eCLIP33.33■■■□□ 2.93
PTBP1P-201ENST00000554374 PBRM1Q86U86 1689 aa33.31■■■□□ 2.92
PTBP1P-201ENST00000554374 IGF1RP08069 1367 aa33.28■■■□□ 2.92
PTBP1P-201ENST00000554374 CSRNP3Q8WYN3 585 aa33.27■■■□□ 2.92
PTBP1P-201ENST00000554374 ERICH3Q5RHP9 1530 aa33.26■■■□□ 2.91
PTBP1P-201ENST00000554374 GRIN2BQ13224 1484 aa33.2■■■□□ 2.91
PTBP1P-201ENST00000554374 PRXQ9BXM0 1461 aa33.17■■■□□ 2.9
PTBP1P-201ENST00000554374 CUL7Q14999 1698 aa33.16■■■□□ 2.9
PTBP1P-201ENST00000554374 KIF21BO75037 1637 aa33.16■■■□□ 2.9
PTBP1P-201ENST00000554374 ADAMTS12P58397 1594 aa33.09■■■□□ 2.89
PTBP1P-201ENST00000554374 CARMIL1Q5VZK9 1371 aa33.06■■■□□ 2.88
PTBP1P-201ENST00000554374 SNAPC4Q5SXM2 1469 aa33.05■■■□□ 2.88
PTBP1P-201ENST00000554374 RAPGEF2Q9Y4G8 1499 aa33.03■■■□□ 2.88
PTBP1P-201ENST00000554374 MAGI1Q96QZ7 1491 aaPredicted RBP33.02■■■□□ 2.88
PTBP1P-201ENST00000554374 FHAD1B1AJZ9 1412 aa32.98■■■□□ 2.87
PTBP1P-201ENST00000554374 LOC105371045A0A1W2PR82 267 aa32.97■■■□□ 2.87
PTBP1P-201ENST00000554374 GOLGA3Q08378 1498 aa32.97■■■□□ 2.87
PTBP1P-201ENST00000554374 SYNJ2O15056 1496 aa32.89■■■□□ 2.86
PTBP1P-201ENST00000554374 EHMT2Q96KQ7 1210 aa32.85■■■□□ 2.85
PTBP1P-201ENST00000554374 GRIN2AQ12879 1464 aa32.82■■■□□ 2.84
PTBP1P-201ENST00000554374 CHD1O14646 1710 aa32.8■■■□□ 2.84
PTBP1P-201ENST00000554374 TNIKQ9UKE5 1360 aa32.73■■■□□ 2.83
PTBP1P-201ENST00000554374 CTTNBP2Q8WZ74 1663 aa32.73■■■□□ 2.83
PTBP1P-201ENST00000554374 UBTFP17480 764 aaKnown RBP32.69■■■□□ 2.82
PTBP1P-201ENST00000554374 CHMP7Q8WUX9 453 aaPredicted RBP32.68■■■□□ 2.82
PTBP1P-201ENST00000554374 CEP170Q5SW79 1584 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms