RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 NISCHQ9Y2I1 1504 aa41.64■■■■■ 4.26
MBD1-216ENST00000587605 CCDC180Q9P1Z9 1646 aa35.72■■■■□ 3.31
MBD1-216ENST00000587605 ZCCHC6Q5VYS8 1495 aaKnown RBP35.24■■■■□ 3.23
MBD1-216ENST00000587605 SHROOM4Q9ULL8 1493 aa34.87■■■■□ 3.17
MBD1-216ENST00000587605 DCAF1Q9Y4B6 1507 aa34.44■■■■□ 3.1
MBD1-216ENST00000587605 SUPT5HO00267 1087 aaKnown RBP34.19■■■■□ 3.06
MBD1-216ENST00000587605 DCAF8L2P0C7V8 631 aa33.97■■■■□ 3.03
MBD1-216ENST00000587605 MYO15BQ96JP2 1530 aa33.55■■■□□ 2.96
MBD1-216ENST00000587605 CHIC1Q5VXU3 224 aa33.4■■■□□ 2.94
MBD1-216ENST00000587605 ABCC9O60706 1549 aa33.25■■■□□ 2.91
MBD1-216ENST00000587605 SCRIBQ14160 1630 aa33.04■■■□□ 2.88
MBD1-216ENST00000587605 NACADO15069 1562 aa32.98■■■□□ 2.87
MBD1-216ENST00000587605 RSF1Q96T23 1441 aaPredicted RBP32.8■■■□□ 2.84
MBD1-216ENST00000587605 RB1CC1Q8TDY2 1594 aa32.58■■■□□ 2.81
MBD1-216ENST00000587605 HRCP23327 699 aa32.24■■■□□ 2.75
MBD1-216ENST00000587605 CECR2Q9BXF3 1484 aa32.23■■■□□ 2.75
MBD1-216ENST00000587605 MROH2BQ7Z745 1585 aa32.21■■■□□ 2.75
MBD1-216ENST00000587605 LOC105371045A0A1W2PR82 267 aa32.16■■■□□ 2.74
MBD1-216ENST00000587605 PCGF6Q9BYE7 350 aa32.08■■■□□ 2.73
MBD1-216ENST00000587605 TRIM41Q8WV44 630 aa32.06■■■□□ 2.72
MBD1-216ENST00000587605 BAZ1AQ9NRL2 1556 aaPredicted RBP32.06■■■□□ 2.72
MBD1-216ENST00000587605 WIZO95785 1651 aa32.03■■■□□ 2.72
MBD1-216ENST00000587605 UNC13AQ9UPW8 1703 aa31.78■■■□□ 2.68
MBD1-216ENST00000587605 TRIM26Q12899 539 aaPredicted RBP31.78■■■□□ 2.68
MBD1-216ENST00000587605 SMARCA4P51532 1647 aa31.75■■■□□ 2.67
MBD1-216ENST00000587605 EIF4G1Q04637 1599 aaKnown RBP31.74■■■□□ 2.67
MBD1-216ENST00000587605 TOP2AP11388 1531 aaKnown RBP31.74■■■□□ 2.67
MBD1-216ENST00000587605 FAM9AQ8IZU1 332 aaPredicted RBP31.5■■■□□ 2.63
MBD1-216ENST00000587605 SMARCA2P51531 1590 aa31.47■■■□□ 2.63
MBD1-216ENST00000587605 CCDC88BA6NC98 1476 aa31.43■■■□□ 2.62
MBD1-216ENST00000587605 BICRAQ9NZM4 1560 aa31.37■■■□□ 2.61
MBD1-216ENST00000587605 PEG3Q9GZU2 1588 aa31.3■■■□□ 2.6
MBD1-216ENST00000587605 ZEB1P37275 1124 aaPredicted RBP31.25■■■□□ 2.59
MBD1-216ENST00000587605 PPARGC1BQ86YN6 1023 aaKnown RBP31.2■■■□□ 2.58
MBD1-216ENST00000587605 ABCC8Q09428 1581 aa31.17■■■□□ 2.58
MBD1-216ENST00000587605 EEA1Q15075 1411 aa31.12■■■□□ 2.57
MBD1-216ENST00000587605 PABPN1Q86U42 306 aaKnown RBP eCLIP31.02■■■□□ 2.56
MBD1-216ENST00000587605 EHMT2Q96KQ7 1210 aa30.99■■■□□ 2.55
MBD1-216ENST00000587605 WRNQ14191 1432 aaPredicted RBP eCLIP30.92■■■□□ 2.54
MBD1-216ENST00000587605 ATAD2BQ9ULI0 1458 aa30.9■■■□□ 2.54
MBD1-216ENST00000587605 TNIKQ9UKE5 1360 aa30.87■■■□□ 2.53
MBD1-216ENST00000587605 SOGA1O94964 1423 aa30.85■■■□□ 2.53
MBD1-216ENST00000587605 BAZ1BQ9UIG0 1483 aaKnown RBP30.81■■■□□ 2.52
MBD1-216ENST00000587605 CEP162Q5TB80 1403 aa30.8■■■□□ 2.52
MBD1-216ENST00000587605 CSRNP3Q8WYN3 585 aa30.78■■■□□ 2.52
MBD1-216ENST00000587605 GOLGA3Q08378 1498 aa30.73■■■□□ 2.51
MBD1-216ENST00000587605 SYNJ1O43426 1573 aa30.66■■■□□ 2.5
MBD1-216ENST00000587605 RUSC2Q8N2Y8 1516 aa30.65■■■□□ 2.5
MBD1-216ENST00000587605 KIF21BO75037 1637 aa30.63■■■□□ 2.49
MBD1-216ENST00000587605 CEP164Q9UPV0 1460 aa30.6■■■□□ 2.49
MBD1-216ENST00000587605 UBTFP17480 764 aaKnown RBP30.51■■■□□ 2.48
MBD1-216ENST00000587605 HMGXB3Q12766 1538 aa30.5■■■□□ 2.47
MBD1-216ENST00000587605 TOP2BQ02880 1626 aa30.45■■■□□ 2.46
MBD1-216ENST00000587605 NCAPD3P42695 1498 aa30.41■■■□□ 2.46
MBD1-216ENST00000587605 BIVM-ERCC5R4GMW8 1640 aa30.4■■■□□ 2.46
MBD1-216ENST00000587605 CCER1Q8TC90 406 aaPredicted RBP30.32■■■□□ 2.44
MBD1-216ENST00000587605 CLIP1P30622 1438 aa30.27■■■□□ 2.44
MBD1-216ENST00000587605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.25■■■□□ 2.43
MBD1-216ENST00000587605 VPS8Q8N3P4 1428 aa30.2■■■□□ 2.43
MBD1-216ENST00000587605 ERICH3Q5RHP9 1530 aa30.19■■■□□ 2.42
MBD1-216ENST00000587605 RAPGEF2Q9Y4G8 1499 aa30.18■■■□□ 2.42
MBD1-216ENST00000587605 CFTRP13569 1480 aa30.1■■■□□ 2.41
MBD1-216ENST00000587605 PRXQ9BXM0 1461 aa30.07■■■□□ 2.4
MBD1-216ENST00000587605 PRDM2Q13029 1718 aa30.06■■■□□ 2.4
MBD1-216ENST00000587605 CUX1P39880 1505 aa30.05■■■□□ 2.4
MBD1-216ENST00000587605 TTBK1Q5TCY1 1321 aaPredicted RBP30.04■■■□□ 2.4
MBD1-216ENST00000587605 KIF27Q86VH2 1401 aa29.96■■■□□ 2.39
MBD1-216ENST00000587605 APLP2Q06481 763 aa29.96■■■□□ 2.39
MBD1-216ENST00000587605 ARAP1Q96P48 1450 aa29.8■■■□□ 2.36
MBD1-216ENST00000587605 CADPSQ9ULU8 1353 aa29.73■■■□□ 2.35
MBD1-216ENST00000587605 DIEXFQ68CQ4 756 aaKnown RBP29.68■■■□□ 2.34
MBD1-216ENST00000587605 HNRNPUL2Q1KMD3 747 aaKnown RBP29.65■■■□□ 2.34
MBD1-216ENST00000587605 RANGAP1P46060 587 aaPredicted RBP29.6■■■□□ 2.33
MBD1-216ENST00000587605 ZNF316A6NFI3 1004 aaPredicted RBP29.59■■■□□ 2.33
MBD1-216ENST00000587605 CUX2O14529 1486 aa29.58■■■□□ 2.33
MBD1-216ENST00000587605 CC2D2AQ9P2K1 1620 aa29.56■■■□□ 2.32
MBD1-216ENST00000587605 ARHGAP35Q9NRY4 1499 aa29.55■■■□□ 2.32
MBD1-216ENST00000587605 CLSPNQ9HAW4 1339 aa29.54■■■□□ 2.32
MBD1-216ENST00000587605 IGF1RP08069 1367 aa29.54■■■□□ 2.32
MBD1-216ENST00000587605 FGD5Q6ZNL6 1462 aa29.52■■■□□ 2.32
MBD1-216ENST00000587605 RRBP1Q9P2E9 1410 aaKnown RBP29.51■■■□□ 2.31
MBD1-216ENST00000587605 MAP3K1Q13233 1512 aa29.47■■■□□ 2.31
MBD1-216ENST00000587605 SCAF1Q9H7N4 1312 aaKnown RBP29.45■■■□□ 2.3
MBD1-216ENST00000587605 CARMIL1Q5VZK9 1371 aa29.42■■■□□ 2.3
MBD1-216ENST00000587605 FANCD2Q9BXW9 1451 aa29.42■■■□□ 2.3
MBD1-216ENST00000587605 DNMBPQ6XZF7 1577 aa29.4■■■□□ 2.3
MBD1-216ENST00000587605 KANK4Q5T7N3 995 aaPredicted RBP29.39■■■□□ 2.3
MBD1-216ENST00000587605 CENPBP07199 599 aaPredicted RBP29.39■■■□□ 2.3
MBD1-216ENST00000587605 ACIN1Q9UKV3 1341 aaKnown RBP29.39■■■□□ 2.3
MBD1-216ENST00000587605 TIAM1Q13009 1591 aa29.31■■■□□ 2.28
MBD1-216ENST00000587605 CCNB3Q8WWL7 1395 aa29.31■■■□□ 2.28
MBD1-216ENST00000587605 DHX57Q6P158 1386 aaKnown RBP29.3■■■□□ 2.28
MBD1-216ENST00000587605 ABCA10Q8WWZ4 1543 aa29.3■■■□□ 2.28
MBD1-216ENST00000587605 FHAD1B1AJZ9 1412 aa29.28■■■□□ 2.28
MBD1-216ENST00000587605 TOPBP1Q92547 1522 aa29.24■■■□□ 2.27
MBD1-216ENST00000587605 CUL7Q14999 1698 aa29.24■■■□□ 2.27
MBD1-216ENST00000587605 NEUROD1Q13562 356 aa29.2■■■□□ 2.26
MBD1-216ENST00000587605 EFCAB5A4FU69 1503 aa29.19■■■□□ 2.26
MBD1-216ENST00000587605 POLA1P09884 1462 aaPredicted RBP29.19■■■□□ 2.26
MBD1-216ENST00000587605 CFAP43Q8NDM7 1665 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms