RNA–Protein interactions for RNA: ENST00000326039.3

GRTP1-201, Transcript of growth hormone regulated TBC protein 1, humanhuman

TSL 1 (best) BASIC

Gene GRTP1, Length 1,294 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRTP1-201ENST00000326039 NISCHQ9Y2I1 1504 aa49.89■■■■■ 5.58
GRTP1-201ENST00000326039 CCDC180Q9P1Z9 1646 aa44.17■■■■■ 4.66
GRTP1-201ENST00000326039 ABCC9O60706 1549 aa43.99■■■■■ 4.63
GRTP1-201ENST00000326039 DCAF8L2P0C7V8 631 aa41.87■■■■■ 4.29
GRTP1-201ENST00000326039 RB1CC1Q8TDY2 1594 aa41.84■■■■■ 4.29
GRTP1-201ENST00000326039 NACADO15069 1562 aa41.67■■■■■ 4.26
GRTP1-201ENST00000326039 ZCCHC6Q5VYS8 1495 aaKnown RBP41.5■■■■■ 4.23
GRTP1-201ENST00000326039 MYO15BQ96JP2 1530 aa41.44■■■■■ 4.23
GRTP1-201ENST00000326039 DCAF1Q9Y4B6 1507 aa41.25■■■■■ 4.19
GRTP1-201ENST00000326039 DNAJC5BQ9UF47 199 aa41.09■■■■■ 4.17
GRTP1-201ENST00000326039 PABPN1Q86U42 306 aaKnown RBP eCLIP41.05■■■■■ 4.16
GRTP1-201ENST00000326039 UNC13AQ9UPW8 1703 aa40.98■■■■■ 4.15
GRTP1-201ENST00000326039 BICRAQ9NZM4 1560 aa40.71■■■■■ 4.11
GRTP1-201ENST00000326039 SCRIBQ14160 1630 aa40.38■■■■■ 4.06
GRTP1-201ENST00000326039 SHROOM4Q9ULL8 1493 aa40.01■■■■■ 4
GRTP1-201ENST00000326039 CC2D2AQ9P2K1 1620 aa39.69■■■■□ 3.94
GRTP1-201ENST00000326039 EIF4G1Q04637 1599 aaKnown RBP39.65■■■■□ 3.94
GRTP1-201ENST00000326039 CECR2Q9BXF3 1484 aa39.53■■■■□ 3.92
GRTP1-201ENST00000326039 SMARCA4P51532 1647 aa38.63■■■■□ 3.77
GRTP1-201ENST00000326039 BAZ1AQ9NRL2 1556 aaPredicted RBP38.61■■■■□ 3.77
GRTP1-201ENST00000326039 NCAPD3P42695 1498 aa38.57■■■■□ 3.76
GRTP1-201ENST00000326039 ATAD2BQ9ULI0 1458 aa38.56■■■■□ 3.76
GRTP1-201ENST00000326039 MROH2BQ7Z745 1585 aa38.46■■■■□ 3.75
GRTP1-201ENST00000326039 SMARCA2P51531 1590 aa38.41■■■■□ 3.74
GRTP1-201ENST00000326039 PEG3Q9GZU2 1588 aa38.28■■■■□ 3.72
GRTP1-201ENST00000326039 HMGXB3Q12766 1538 aa38.23■■■■□ 3.71
GRTP1-201ENST00000326039 BAZ1BQ9UIG0 1483 aaKnown RBP38.17■■■■□ 3.7
GRTP1-201ENST00000326039 RSF1Q96T23 1441 aaPredicted RBP38.07■■■■□ 3.69
GRTP1-201ENST00000326039 WIZO95785 1651 aa37.96■■■■□ 3.67
GRTP1-201ENST00000326039 NESP48681 1621 aa37.9■■■■□ 3.66
GRTP1-201ENST00000326039 ERCC6Q03468 1493 aa37.88■■■■□ 3.65
GRTP1-201ENST00000326039 CUX2O14529 1486 aa37.64■■■■□ 3.62
GRTP1-201ENST00000326039 TOP2AP11388 1531 aaKnown RBP37.56■■■■□ 3.6
GRTP1-201ENST00000326039 LAMC3Q9Y6N6 1575 aa37.5■■■■□ 3.59
GRTP1-201ENST00000326039 CADPSQ9ULU8 1353 aa37.47■■■■□ 3.59
GRTP1-201ENST00000326039 DNAJC5Q9H3Z4 198 aa37.38■■■■□ 3.57
GRTP1-201ENST00000326039 THOC2Q8NI27 1593 aaKnown RBP37.37■■■■□ 3.57
GRTP1-201ENST00000326039 KIF21AQ7Z4S6 1674 aa37.35■■■■□ 3.57
GRTP1-201ENST00000326039 PDS5BQ9NTI5 1447 aa37.29■■■■□ 3.56
GRTP1-201ENST00000326039 CCDC88BA6NC98 1476 aa37.24■■■■□ 3.55
GRTP1-201ENST00000326039 CFTRP13569 1480 aa37.19■■■■□ 3.54
GRTP1-201ENST00000326039 SUPT5HO00267 1087 aaKnown RBP37.14■■■■□ 3.54
GRTP1-201ENST00000326039 MRC2Q9UBG0 1479 aa36.99■■■■□ 3.51
GRTP1-201ENST00000326039 FANCD2Q9BXW9 1451 aa36.96■■■■□ 3.51
GRTP1-201ENST00000326039 CEP164Q9UPV0 1460 aa36.9■■■■□ 3.5
GRTP1-201ENST00000326039 WDR62O43379 1518 aa36.88■■■■□ 3.49
GRTP1-201ENST00000326039 URB2Q14146 1524 aaKnown RBP36.63■■■■□ 3.45
GRTP1-201ENST00000326039 PRDM2Q13029 1718 aa36.56■■■■□ 3.44
GRTP1-201ENST00000326039 TOPBP1Q92547 1522 aa36.34■■■■□ 3.41
GRTP1-201ENST00000326039 ABCC8Q09428 1581 aa36.34■■■■□ 3.41
GRTP1-201ENST00000326039 DNMBPQ6XZF7 1577 aa36.23■■■■□ 3.39
GRTP1-201ENST00000326039 ZNF608Q9ULD9 1512 aaPredicted RBP36.17■■■■□ 3.38
GRTP1-201ENST00000326039 IFT140Q96RY7 1462 aa36.15■■■■□ 3.38
GRTP1-201ENST00000326039 CUX1P39880 1505 aa36.06■■■■□ 3.36
GRTP1-201ENST00000326039 POLA1P09884 1462 aaPredicted RBP36.05■■■■□ 3.36
GRTP1-201ENST00000326039 OSCARQ8IYS5 282 aa36■■■■□ 3.35
GRTP1-201ENST00000326039 TRIM41Q8WV44 630 aa35.98■■■■□ 3.35
GRTP1-201ENST00000326039 SOGA1O94964 1423 aa35.98■■■■□ 3.35
GRTP1-201ENST00000326039 RAD54L2Q9Y4B4 1467 aa35.94■■■■□ 3.34
GRTP1-201ENST00000326039 FGD5Q6ZNL6 1462 aa35.93■■■■□ 3.34
GRTP1-201ENST00000326039 EIF4G3O43432 1585 aaKnown RBP35.92■■■■□ 3.34
GRTP1-201ENST00000326039 TARBP1Q13395 1621 aaKnown RBP35.9■■■■□ 3.34
GRTP1-201ENST00000326039 AQRO60306 1485 aaKnown RBP eCLIP35.86■■■■□ 3.332e-7■■■■□ 20.5
GRTP1-201ENST00000326039 WRNQ14191 1432 aaPredicted RBP eCLIP35.85■■■■□ 3.33
GRTP1-201ENST00000326039 TDRD9Q8NDG6 1382 aaKnown RBP35.81■■■■□ 3.32
GRTP1-201ENST00000326039 TOP2BQ02880 1626 aa35.68■■■■□ 3.3
GRTP1-201ENST00000326039 SYNJ1O43426 1573 aa35.68■■■■□ 3.3
GRTP1-201ENST00000326039 BIVM-ERCC5R4GMW8 1640 aa35.61■■■■□ 3.29
GRTP1-201ENST00000326039 CHD1O14646 1710 aa35.61■■■■□ 3.29
GRTP1-201ENST00000326039 ABCA10Q8WWZ4 1543 aa35.61■■■■□ 3.29
GRTP1-201ENST00000326039 RIMBP3CA6NJZ7 1639 aa35.57■■■■□ 3.29
GRTP1-201ENST00000326039 RIMBP3BA6NNM3 1639 aa35.57■■■■□ 3.29
GRTP1-201ENST00000326039 RIMBP3Q9UFD9 1639 aa35.57■■■■□ 3.29
GRTP1-201ENST00000326039 FBLN2P98095 1184 aa35.57■■■■□ 3.28
GRTP1-201ENST00000326039 WDR97A6NE52 1622 aa35.55■■■■□ 3.28
GRTP1-201ENST00000326039 GRIN2BQ13224 1484 aa35.5■■■■□ 3.27
GRTP1-201ENST00000326039 GAPVD1Q14C86 1478 aa35.5■■■■□ 3.27
GRTP1-201ENST00000326039 ARHGEF11O15085 1522 aa35.48■■■■□ 3.27
GRTP1-201ENST00000326039 SNAPC4Q5SXM2 1469 aa35.48■■■■□ 3.27
GRTP1-201ENST00000326039 MAGI1Q96QZ7 1491 aaPredicted RBP35.37■■■■□ 3.25
GRTP1-201ENST00000326039 CHMP7Q8WUX9 453 aaPredicted RBP35.37■■■■□ 3.25
GRTP1-201ENST00000326039 ABCA5Q8WWZ7 1642 aa35.35■■■■□ 3.25
GRTP1-201ENST00000326039 PBRM1Q86U86 1689 aa35.27■■■■□ 3.24
GRTP1-201ENST00000326039 SYNJ2O15056 1496 aa35.26■■■■□ 3.23
GRTP1-201ENST00000326039 CYB5RLQ6IPT4 315 aa35.24■■■■□ 3.23
GRTP1-201ENST00000326039 CLASP1Q7Z460 1538 aa35.18■■■■□ 3.22
GRTP1-201ENST00000326039 ARAP1Q96P48 1450 aa35.18■■■■□ 3.22
GRTP1-201ENST00000326039 ERICH3Q5RHP9 1530 aa35.14■■■■□ 3.22
GRTP1-201ENST00000326039 FHAD1B1AJZ9 1412 aa35.11■■■■□ 3.21
GRTP1-201ENST00000326039 KIF27Q86VH2 1401 aa35.11■■■■□ 3.21
GRTP1-201ENST00000326039 IGF1RP08069 1367 aa35.09■■■■□ 3.21
GRTP1-201ENST00000326039 ADAMTS12P58397 1594 aa35.02■■■■□ 3.2
GRTP1-201ENST00000326039 GRIN2AQ12879 1464 aa35.01■■■■□ 3.19
GRTP1-201ENST00000326039 NUP160Q12769 1436 aa34.89■■■■□ 3.18
GRTP1-201ENST00000326039 CEP170Q5SW79 1584 aa34.83■■■■□ 3.17
GRTP1-201ENST00000326039 CARMIL1Q5VZK9 1371 aa34.83■■■■□ 3.17
GRTP1-201ENST00000326039 RUSC2Q8N2Y8 1516 aa34.82■■■■□ 3.16
GRTP1-201ENST00000326039 ERCC6L2Q5T890 1561 aa34.78■■■■□ 3.16
GRTP1-201ENST00000326039 TRHP20396 242 aaPredicted RBP34.76■■■■□ 3.16
GRTP1-201ENST00000326039 CUL7Q14999 1698 aa34.71■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms