Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THSD1Q9NS62 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THSD1Q9NS62 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THSD1Q9NS62 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THSD1Q9NS62 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THSD1Q9NS62 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
THSD1Q9NS62 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.52■□□□□ 0.72
THSD1Q9NS62 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
THSD1Q9NS62 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.52■□□□□ 0.71
THSD1Q9NS62 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
THSD1Q9NS62 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
THSD1Q9NS62 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THSD1Q9NS62 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THSD1Q9NS62 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THSD1Q9NS62 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
THSD1Q9NS62 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
THSD1Q9NS62 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
THSD1Q9NS62 AC133681.1-201ENST00000465482 601 ntBASIC19.51■□□□□ 0.71
THSD1Q9NS62 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 MTDHP1-201ENST00000605323 784 ntBASIC19.51■□□□□ 0.71
THSD1Q9NS62 AL049637.2-201ENST00000641778 930 ntBASIC19.51■□□□□ 0.71
THSD1Q9NS62 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THSD1Q9NS62 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
THSD1Q9NS62 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
THSD1Q9NS62 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THSD1Q9NS62 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THSD1Q9NS62 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
THSD1Q9NS62 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.51■□□□□ 0.71
THSD1Q9NS62 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
THSD1Q9NS62 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
THSD1Q9NS62 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
THSD1Q9NS62 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THSD1Q9NS62 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.5■□□□□ 0.71
THSD1Q9NS62 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
THSD1Q9NS62 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THSD1Q9NS62 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THSD1Q9NS62 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THSD1Q9NS62 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
THSD1Q9NS62 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
THSD1Q9NS62 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.5■□□□□ 0.71
THSD1Q9NS62 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
THSD1Q9NS62 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.5■□□□□ 0.71
THSD1Q9NS62 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
THSD1Q9NS62 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.5■□□□□ 0.71
THSD1Q9NS62 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.5■□□□□ 0.71
THSD1Q9NS62 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.5■□□□□ 0.71
THSD1Q9NS62 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
THSD1Q9NS62 AC124016.1-201ENST00000609552 612 ntBASIC19.5■□□□□ 0.71
THSD1Q9NS62 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THSD1Q9NS62 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THSD1Q9NS62 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THSD1Q9NS62 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.5■□□□□ 0.71
THSD1Q9NS62 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
THSD1Q9NS62 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THSD1Q9NS62 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THSD1Q9NS62 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THSD1Q9NS62 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
THSD1Q9NS62 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
THSD1Q9NS62 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
THSD1Q9NS62 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
THSD1Q9NS62 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.49■□□□□ 0.71
THSD1Q9NS62 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
THSD1Q9NS62 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
THSD1Q9NS62 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
THSD1Q9NS62 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
THSD1Q9NS62 C2orf69P4-201ENST00000565394 541 ntBASIC19.49■□□□□ 0.71
THSD1Q9NS62 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
THSD1Q9NS62 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
THSD1Q9NS62 AC133561.5-201ENST00000635547 218 ntBASIC19.49■□□□□ 0.71
THSD1Q9NS62 AL023875.1-201ENST00000640777 796 ntBASIC19.49■□□□□ 0.71
THSD1Q9NS62 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
THSD1Q9NS62 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
THSD1Q9NS62 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THSD1Q9NS62 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
THSD1Q9NS62 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
THSD1Q9NS62 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
THSD1Q9NS62 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THSD1Q9NS62 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THSD1Q9NS62 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THSD1Q9NS62 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THSD1Q9NS62 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THSD1Q9NS62 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THSD1Q9NS62 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THSD1Q9NS62 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THSD1Q9NS62 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms