RNA–Protein interactions for RNA: ENST00000456483.3

ESR1-210, Transcript of estrogen receptor 1, humanhuman

TSL 1 (best) BASIC

Gene ESR1, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR1-210ENST00000456483 NISCHQ9Y2I1 1504 aa48.58■■■■■ 5.37
ESR1-210ENST00000456483 CCDC180Q9P1Z9 1646 aa42.92■■■■■ 4.46
ESR1-210ENST00000456483 ABCC9O60706 1549 aa41.27■■■■■ 4.2
ESR1-210ENST00000456483 ZCCHC6Q5VYS8 1495 aaKnown RBP40.6■■■■■ 4.09
ESR1-210ENST00000456483 DCAF1Q9Y4B6 1507 aa40.29■■■■■ 4.04
ESR1-210ENST00000456483 DCAF8L2P0C7V8 631 aa40.27■■■■■ 4.04
ESR1-210ENST00000456483 MYO15BQ96JP2 1530 aa40.24■■■■■ 4.03
ESR1-210ENST00000456483 NACADO15069 1562 aa40.21■■■■■ 4.03
ESR1-210ENST00000456483 RB1CC1Q8TDY2 1594 aa40.08■■■■■ 4.01
ESR1-210ENST00000456483 SCRIBQ14160 1630 aa39.13■■■■□ 3.85
ESR1-210ENST00000456483 UNC13AQ9UPW8 1703 aa39.1■■■■□ 3.85
ESR1-210ENST00000456483 BICRAQ9NZM4 1560 aa38.78■■■■□ 3.8
ESR1-210ENST00000456483 PABPN1Q86U42 306 aaKnown RBP eCLIP38.68■■■■□ 3.78
ESR1-210ENST00000456483 SHROOM4Q9ULL8 1493 aa38.67■■■■□ 3.78
ESR1-210ENST00000456483 EIF4G1Q04637 1599 aaKnown RBP37.72■■■■□ 3.63
ESR1-210ENST00000456483 CECR2Q9BXF3 1484 aa37.71■■■■□ 3.63
ESR1-210ENST00000456483 BAZ1AQ9NRL2 1556 aaPredicted RBP37.63■■■■□ 3.61
ESR1-210ENST00000456483 SMARCA4P51532 1647 aa37.53■■■■□ 3.6
ESR1-210ENST00000456483 MROH2BQ7Z745 1585 aa37.41■■■■□ 3.58
ESR1-210ENST00000456483 CC2D2AQ9P2K1 1620 aa37.38■■■■□ 3.57
ESR1-210ENST00000456483 RSF1Q96T23 1441 aaPredicted RBP37.25■■■■□ 3.55
ESR1-210ENST00000456483 DNAJC5BQ9UF47 199 aa37.24■■■■□ 3.55
ESR1-210ENST00000456483 SMARCA2P51531 1590 aa37.2■■■■□ 3.55
ESR1-210ENST00000456483 PEG3Q9GZU2 1588 aa37.2■■■■□ 3.55
ESR1-210ENST00000456483 ATAD2BQ9ULI0 1458 aa37.18■■■■□ 3.54
ESR1-210ENST00000456483 NCAPD3P42695 1498 aa37.09■■■■□ 3.53
ESR1-210ENST00000456483 WIZO95785 1651 aa37.03■■■■□ 3.52
ESR1-210ENST00000456483 HMGXB3Q12766 1538 aa36.96■■■■□ 3.51
ESR1-210ENST00000456483 BAZ1BQ9UIG0 1483 aaKnown RBP36.91■■■■□ 3.5
ESR1-210ENST00000456483 SUPT5HO00267 1087 aaKnown RBP36.78■■■■□ 3.48
ESR1-210ENST00000456483 TOP2AP11388 1531 aaKnown RBP36.72■■■■□ 3.47
ESR1-210ENST00000456483 CCDC88BA6NC98 1476 aa36.28■■■■□ 3.4
ESR1-210ENST00000456483 CADPSQ9ULU8 1353 aa36.04■■■■□ 3.36
ESR1-210ENST00000456483 LAMC3Q9Y6N6 1575 aa36■■■■□ 3.35
ESR1-210ENST00000456483 CFTRP13569 1480 aa35.96■■■■□ 3.35
ESR1-210ENST00000456483 NESP48681 1621 aa35.89■■■■□ 3.34
ESR1-210ENST00000456483 PDS5BQ9NTI5 1447 aa35.75■■■■□ 3.31
ESR1-210ENST00000456483 PRDM2Q13029 1718 aa35.74■■■■□ 3.31
ESR1-210ENST00000456483 FANCD2Q9BXW9 1451 aa35.6■■■■□ 3.29
ESR1-210ENST00000456483 ERCC6Q03468 1493 aa35.56■■■■□ 3.28
ESR1-210ENST00000456483 KIF21AQ7Z4S6 1674 aa35.5■■■■□ 3.27
ESR1-210ENST00000456483 CEP164Q9UPV0 1460 aa35.5■■■■□ 3.27
ESR1-210ENST00000456483 MRC2Q9UBG0 1479 aa35.31■■■■□ 3.24
ESR1-210ENST00000456483 THOC2Q8NI27 1593 aaKnown RBP35.24■■■■□ 3.23
ESR1-210ENST00000456483 ABCC8Q09428 1581 aa35.23■■■■□ 3.23
ESR1-210ENST00000456483 URB2Q14146 1524 aaKnown RBP35.17■■■■□ 3.22
ESR1-210ENST00000456483 WDR62O43379 1518 aa35.16■■■■□ 3.22
ESR1-210ENST00000456483 DNMBPQ6XZF7 1577 aa35.13■■■■□ 3.21
ESR1-210ENST00000456483 WRNQ14191 1432 aaPredicted RBP eCLIP35.13■■■■□ 3.21
ESR1-210ENST00000456483 TOPBP1Q92547 1522 aa35.1■■■■□ 3.21
ESR1-210ENST00000456483 CUX1P39880 1505 aa35.06■■■■□ 3.2
ESR1-210ENST00000456483 CUX2O14529 1486 aa34.99■■■■□ 3.19
ESR1-210ENST00000456483 TOP2BQ02880 1626 aa34.97■■■■□ 3.19
ESR1-210ENST00000456483 BIVM-ERCC5R4GMW8 1640 aa34.96■■■■□ 3.19
ESR1-210ENST00000456483 SYNJ1O43426 1573 aa34.94■■■■□ 3.18
ESR1-210ENST00000456483 FGD5Q6ZNL6 1462 aa34.85■■■■□ 3.17
ESR1-210ENST00000456483 POLA1P09884 1462 aaPredicted RBP34.84■■■■□ 3.17
ESR1-210ENST00000456483 TRIM41Q8WV44 630 aa34.76■■■■□ 3.16
ESR1-210ENST00000456483 CHIC1Q5VXU3 224 aa34.75■■■■□ 3.15
ESR1-210ENST00000456483 IFT140Q96RY7 1462 aa34.75■■■■□ 3.15
ESR1-210ENST00000456483 SOGA1O94964 1423 aa34.74■■■■□ 3.15
ESR1-210ENST00000456483 TARBP1Q13395 1621 aaKnown RBP34.65■■■■□ 3.14
ESR1-210ENST00000456483 RAD54L2Q9Y4B4 1467 aa34.65■■■■□ 3.14
ESR1-210ENST00000456483 ABCA10Q8WWZ4 1543 aa34.58■■■■□ 3.13
ESR1-210ENST00000456483 WDR97A6NE52 1622 aa34.52■■■■□ 3.12
ESR1-210ENST00000456483 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.11
ESR1-210ENST00000456483 TDRD9Q8NDG6 1382 aaKnown RBP34.42■■■■□ 3.1
ESR1-210ENST00000456483 EIF4G3O43432 1585 aaKnown RBP34.36■■■■□ 3.09
ESR1-210ENST00000456483 KIF27Q86VH2 1401 aa34.36■■■■□ 3.09
ESR1-210ENST00000456483 AQRO60306 1485 aaKnown RBP eCLIP34.36■■■■□ 3.09
ESR1-210ENST00000456483 ABCA5Q8WWZ7 1642 aa34.35■■■■□ 3.09
ESR1-210ENST00000456483 GAPVD1Q14C86 1478 aa34.35■■■■□ 3.09
ESR1-210ENST00000456483 GRIN2BQ13224 1484 aa34.26■■■■□ 3.07
ESR1-210ENST00000456483 EEA1Q15075 1411 aa34.2■■■■□ 3.07
ESR1-210ENST00000456483 ERICH3Q5RHP9 1530 aa34.2■■■■□ 3.06
ESR1-210ENST00000456483 PBRM1Q86U86 1689 aa34.19■■■■□ 3.06
ESR1-210ENST00000456483 RUSC2Q8N2Y8 1516 aa34.15■■■■□ 3.06
ESR1-210ENST00000456483 IGF1RP08069 1367 aa34.12■■■■□ 3.05
ESR1-210ENST00000456483 MAGI1Q96QZ7 1491 aaPredicted RBP34.11■■■■□ 3.05
ESR1-210ENST00000456483 SNAPC4Q5SXM2 1469 aa34.07■■■■□ 3.05
ESR1-210ENST00000456483 CSRNP3Q8WYN3 585 aa34.01■■■■□ 3.04
ESR1-210ENST00000456483 CUL7Q14999 1698 aa34.01■■■■□ 3.03
ESR1-210ENST00000456483 FHAD1B1AJZ9 1412 aa33.99■■■■□ 3.03
ESR1-210ENST00000456483 ADAMTS12P58397 1594 aa33.97■■■■□ 3.03
ESR1-210ENST00000456483 SYNJ2O15056 1496 aa33.95■■■■□ 3.03
ESR1-210ENST00000456483 FAM9AQ8IZU1 332 aaPredicted RBP33.95■■■■□ 3.02
ESR1-210ENST00000456483 CARMIL1Q5VZK9 1371 aa33.94■■■■□ 3.02
ESR1-210ENST00000456483 CHMP7Q8WUX9 453 aaPredicted RBP33.89■■■■□ 3.02
ESR1-210ENST00000456483 PRXQ9BXM0 1461 aa33.86■■■■□ 3.01
ESR1-210ENST00000456483 FBLN2P98095 1184 aa33.84■■■■□ 3.01
ESR1-210ENST00000456483 RAPGEF2Q9Y4G8 1499 aa33.82■■■■□ 3
ESR1-210ENST00000456483 GRIN2AQ12879 1464 aa33.8■■■■□ 3
ESR1-210ENST00000456483 CHD1O14646 1710 aa33.8■■■■□ 3
ESR1-210ENST00000456483 KIF21BO75037 1637 aa33.73■■■□□ 2.99
ESR1-210ENST00000456483 OSCARQ8IYS5 282 aa33.67■■■□□ 2.98
ESR1-210ENST00000456483 NUP160Q12769 1436 aa33.63■■■□□ 2.97
ESR1-210ENST00000456483 GOLGA3Q08378 1498 aa33.59■■■□□ 2.97
ESR1-210ENST00000456483 CEP170Q5SW79 1584 aa33.56■■■□□ 2.96
ESR1-210ENST00000456483 KIAA0586Q9BVV6 1533 aa33.5■■■□□ 2.95
ESR1-210ENST00000456483 CLASP1Q7Z460 1538 aa33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms