Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS25Q9BRG1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS25Q9BRG1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS25Q9BRG1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 TSPY26P-202ENST00000565928 3884 ntBASIC14.05□□□□□ -0.16
VPS25Q9BRG1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 AC018695.7-201ENST00000624587 2492 ntBASIC14.05□□□□□ -0.16
VPS25Q9BRG1 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VPS25Q9BRG1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS25Q9BRG1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS25Q9BRG1 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS25Q9BRG1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS25Q9BRG1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.02□□□□□ -0.16
VPS25Q9BRG1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS25Q9BRG1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS25Q9BRG1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS25Q9BRG1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS25Q9BRG1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VPS25Q9BRG1 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS25Q9BRG1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS25Q9BRG1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS25Q9BRG1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
VPS25Q9BRG1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.02□□□□□ -0.17
VPS25Q9BRG1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms