RNA–Protein interactions for RNA: ENST00000295887.5

CDS1-201, Transcript of CDP-diacylglycerol synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDS1, Length 4,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-201ENST00000295887 NISCHQ9Y2I1 1504 aa29.7■■■□□ 2.35
CDS1-201ENST00000295887 DCAF8L2P0C7V8 631 aa28.97■■■□□ 2.23
CDS1-201ENST00000295887 SUPT5HO00267 1087 aaKnown RBP28.25■■■□□ 2.11
CDS1-201ENST00000295887 SHROOM4Q9ULL8 1493 aa28.03■■■□□ 2.08
CDS1-201ENST00000295887 EHMT2Q96KQ7 1210 aa26.95■■□□□ 1.9
CDS1-201ENST00000295887 PCGF6Q9BYE7 350 aa26.75■■□□□ 1.87
CDS1-201ENST00000295887 FAM9AQ8IZU1 332 aaPredicted RBP26.5■■□□□ 1.83
CDS1-201ENST00000295887 TTBK1Q5TCY1 1321 aaPredicted RBP26.06■■□□□ 1.76
CDS1-201ENST00000295887 TRIM41Q8WV44 630 aa26.03■■□□□ 1.76
CDS1-201ENST00000295887 CHIC1Q5VXU3 224 aa25.94■■□□□ 1.74
CDS1-201ENST00000295887 HRCP23327 699 aa25.84■■□□□ 1.73
CDS1-201ENST00000295887 LOC105371045A0A1W2PR82 267 aa25.82■■□□□ 1.72
CDS1-201ENST00000295887 ZEB1P37275 1124 aaPredicted RBP25.68■■□□□ 1.7
CDS1-201ENST00000295887 APLP2Q06481 763 aa25.67■■□□□ 1.7
CDS1-201ENST00000295887 PPARGC1BQ86YN6 1023 aaKnown RBP25.67■■□□□ 1.7
CDS1-201ENST00000295887 CCER1Q8TC90 406 aaPredicted RBP25.63■■□□□ 1.69
CDS1-201ENST00000295887 TRIM26Q12899 539 aaPredicted RBP25.58■■□□□ 1.69
CDS1-201ENST00000295887 RANGAP1P46060 587 aaPredicted RBP25.53■■□□□ 1.68
CDS1-201ENST00000295887 UBTFP17480 764 aaKnown RBP25.39■■□□□ 1.65
CDS1-201ENST00000295887 ABCC9O60706 1549 aa25.32■■□□□ 1.64
CDS1-201ENST00000295887 CENPBP07199 599 aaPredicted RBP25.3■■□□□ 1.64
CDS1-201ENST00000295887 PELP1Q8IZL8 1130 aaKnown RBP25.17■■□□□ 1.62
CDS1-201ENST00000295887 YTHDC1Q96MU7 727 aaKnown RBP25.1■■□□□ 1.61
CDS1-201ENST00000295887 PABPN1Q86U42 306 aaKnown RBP eCLIP24.97■■□□□ 1.59
CDS1-201ENST00000295887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.93■■□□□ 1.58
CDS1-201ENST00000295887 ATP1B4Q9UN42 357 aaPredicted RBP24.88■■□□□ 1.57
CDS1-201ENST00000295887 HNRNPUL2Q1KMD3 747 aaKnown RBP24.78■■□□□ 1.56
CDS1-201ENST00000295887 ZCCHC6Q5VYS8 1495 aaKnown RBP24.69■■□□□ 1.54
CDS1-201ENST00000295887 ITGAEP38570 1179 aa24.61■■□□□ 1.53
CDS1-201ENST00000295887 DIEXFQ68CQ4 756 aaKnown RBP24.59■■□□□ 1.53
CDS1-201ENST00000295887 MYO15BQ96JP2 1530 aa24.51■■□□□ 1.51
CDS1-201ENST00000295887 SCRIBQ14160 1630 aa24.38■■□□□ 1.49
CDS1-201ENST00000295887 CCDC180Q9P1Z9 1646 aa24.38■■□□□ 1.49
CDS1-201ENST00000295887 DCAF1Q9Y4B6 1507 aa24.34■■□□□ 1.49
CDS1-201ENST00000295887 NEFLP07196 543 aa24.32■■□□□ 1.48
CDS1-201ENST00000295887 GTF3C3Q9Y5Q9 886 aa24.26■■□□□ 1.47
CDS1-201ENST00000295887 ERICH6Q7L0X2 663 aa24.21■■□□□ 1.47
CDS1-201ENST00000295887 CSRNP3Q8WYN3 585 aa24.12■■□□□ 1.45
CDS1-201ENST00000295887 MYT1Q01538 1121 aa24.09■■□□□ 1.45
CDS1-201ENST00000295887 ZNF316A6NFI3 1004 aaPredicted RBP24.06■■□□□ 1.44
CDS1-201ENST00000295887 ACIN1Q9UKV3 1341 aaKnown RBP24.06■■□□□ 1.44
CDS1-201ENST00000295887 FAM50AQ14320 339 aaKnown RBP23.94■■□□□ 1.42
CDS1-201ENST00000295887 CNGB1Q14028 1251 aaPredicted RBP23.9■■□□□ 1.42
CDS1-201ENST00000295887 NEUROD1Q13562 356 aa23.89■■□□□ 1.41
CDS1-201ENST00000295887 RSF1Q96T23 1441 aaPredicted RBP23.88■■□□□ 1.41
CDS1-201ENST00000295887 POLR3GLQ9BT43 218 aa23.87■■□□□ 1.41
CDS1-201ENST00000295887 SCAF1Q9H7N4 1312 aaKnown RBP23.81■■□□□ 1.4
CDS1-201ENST00000295887 BCANQ96GW7 911 aa23.78■■□□□ 1.4
CDS1-201ENST00000295887 P3H3Q8IVL6 736 aa23.66■■□□□ 1.38
CDS1-201ENST00000295887 RB1CC1Q8TDY2 1594 aa23.59■■□□□ 1.37
CDS1-201ENST00000295887 TRIM52Q96A61 297 aa23.57■■□□□ 1.36
CDS1-201ENST00000295887 CECR2Q9BXF3 1484 aa23.56■■□□□ 1.36
CDS1-201ENST00000295887 NACADO15069 1562 aa23.51■■□□□ 1.35
CDS1-201ENST00000295887 MIER1Q8N108 512 aa23.51■■□□□ 1.35
CDS1-201ENST00000295887 ANP32CO43423 234 aa23.5■■□□□ 1.35
CDS1-201ENST00000295887 CEP162Q5TB80 1403 aa23.45■■□□□ 1.35
CDS1-201ENST00000295887 FBLN2P98095 1184 aa23.45■■□□□ 1.34
CDS1-201ENST00000295887 ARID3CA6NKF2 412 aa23.43■■□□□ 1.34
CDS1-201ENST00000295887 CLIP1P30622 1438 aa23.37■■□□□ 1.33
CDS1-201ENST00000295887 DDX10Q13206 875 aaKnown RBP23.34■■□□□ 1.33
CDS1-201ENST00000295887 MYT1LQ9UL68 1186 aa23.34■■□□□ 1.33
CDS1-201ENST00000295887 ZNF326Q5BKZ1 582 aaKnown RBP23.33■■□□□ 1.32
CDS1-201ENST00000295887 FKBP8Q14318 412 aa23.25■■□□□ 1.31
CDS1-201ENST00000295887 TNIKQ9UKE5 1360 aa23.23■■□□□ 1.31
CDS1-201ENST00000295887 GOLGA3Q08378 1498 aa23.21■■□□□ 1.31
CDS1-201ENST00000295887 HIRIP3Q9BW71 556 aaPredicted RBP23.2■■□□□ 1.3
CDS1-201ENST00000295887 MROH2BQ7Z745 1585 aa23.19■■□□□ 1.3
CDS1-201ENST00000295887 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
CDS1-201ENST00000295887 EEA1Q15075 1411 aa23.18■■□□□ 1.3
CDS1-201ENST00000295887 CDK11AQ9UQ88 783 aaPredicted RBP23.16■■□□□ 1.3
CDS1-201ENST00000295887 SOGA1O94964 1423 aa23.16■■□□□ 1.3
CDS1-201ENST00000295887 DAXXQ9UER7 740 aaPredicted RBP23.15■■□□□ 1.3
CDS1-201ENST00000295887 TONSLQ96HA7 1378 aa23.12■■□□□ 1.29
CDS1-201ENST00000295887 BAZ1AQ9NRL2 1556 aaPredicted RBP23.11■■□□□ 1.29
CDS1-201ENST00000295887 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
CDS1-201ENST00000295887 HNRNPUQ00839 825 aaKnown RBP eCLIP23.07■■□□□ 1.28
CDS1-201ENST00000295887 CLSPNQ9HAW4 1339 aa23.04■■□□□ 1.28
CDS1-201ENST00000295887 CHIC2Q9UKJ5 165 aa23.03■■□□□ 1.28
CDS1-201ENST00000295887 RTL5Q5HYW3 569 aaPredicted RBP23.01■■□□□ 1.27
CDS1-201ENST00000295887 ZNF777Q9ULD5 760 aaPredicted RBP22.99■■□□□ 1.27
CDS1-201ENST00000295887 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
CDS1-201ENST00000295887 ABCC8Q09428 1581 aa22.98■■□□□ 1.27
CDS1-201ENST00000295887 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
CDS1-201ENST00000295887 SLC4A1APQ9BWU0 796 aaKnown RBP22.97■■□□□ 1.27
CDS1-201ENST00000295887 FAM9BQ8IZU0 186 aa22.95■■□□□ 1.26
CDS1-201ENST00000295887 IRX6P78412 446 aaPredicted RBP22.88■■□□□ 1.25
CDS1-201ENST00000295887 WIZO95785 1651 aa22.86■■□□□ 1.25
CDS1-201ENST00000295887 MTUS2Q5JR59 1369 aa22.86■■□□□ 1.25
CDS1-201ENST00000295887 SIN3AQ96ST3 1273 aa22.85■■□□□ 1.25
CDS1-201ENST00000295887 RRP7BPQ9NSQ0 103 aa22.8■■□□□ 1.24
CDS1-201ENST00000295887 KIF27Q86VH2 1401 aa22.77■■□□□ 1.24
CDS1-201ENST00000295887 KANK4Q5T7N3 995 aaPredicted RBP22.76■■□□□ 1.23
CDS1-201ENST00000295887 MRS2Q9HD23 443 aa22.74■■□□□ 1.23
CDS1-201ENST00000295887 SALL2Q9Y467 1007 aaPredicted RBP22.74■■□□□ 1.23
CDS1-201ENST00000295887 VPS8Q8N3P4 1428 aa22.72■■□□□ 1.23
CDS1-201ENST00000295887 SUPT16HQ9Y5B9 1047 aaKnown RBP22.7■■□□□ 1.22
CDS1-201ENST00000295887 NPM2Q86SE8 214 aaKnown RBP22.69■■□□□ 1.22
CDS1-201ENST00000295887 CCNB3Q8WWL7 1395 aa22.69■■□□□ 1.22
CDS1-201ENST00000295887 ANP32AP39687 249 aaKnown RBP22.66■■□□□ 1.22
CDS1-201ENST00000295887 EIF4G2P78344 907 aaKnown RBP eCLIP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms