RNA–Protein interactions for RNA: ENST00000357227.8

CDK16-202, Transcript of cyclin dependent kinase 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK16, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-202ENST00000357227 NISCHQ9Y2I1 1504 aa28.64■■■□□ 2.17
CDK16-202ENST00000357227 PELP1Q8IZL8 1130 aaKnown RBP27.09■■□□□ 1.93
CDK16-202ENST00000357227 HRCP23327 699 aa27.07■■□□□ 1.92
CDK16-202ENST00000357227 PPARGC1BQ86YN6 1023 aaKnown RBP26.75■■□□□ 1.87
CDK16-202ENST00000357227 PCGF6Q9BYE7 350 aa26.32■■□□□ 1.8
CDK16-202ENST00000357227 MYT1Q01538 1121 aa26.18■■□□□ 1.78
CDK16-202ENST00000357227 SCAF1Q9H7N4 1312 aaKnown RBP26.15■■□□□ 1.78
CDK16-202ENST00000357227 MYO15BQ96JP2 1530 aa25.62■■□□□ 1.69
CDK16-202ENST00000357227 SUPT5HO00267 1087 aaKnown RBP25.55■■□□□ 1.68
CDK16-202ENST00000357227 SHROOM4Q9ULL8 1493 aa25.54■■□□□ 1.68
CDK16-202ENST00000357227 ACIN1Q9UKV3 1341 aaKnown RBP25.18■■□□□ 1.62
CDK16-202ENST00000357227 CHIC1Q5VXU3 224 aa25.17■■□□□ 1.62
CDK16-202ENST00000357227 NEUROD1Q13562 356 aa25.17■■□□□ 1.62
CDK16-202ENST00000357227 GTF3C3Q9Y5Q9 886 aa25.13■■□□□ 1.61
CDK16-202ENST00000357227 TRIM26Q12899 539 aaPredicted RBP25.04■■□□□ 1.6
CDK16-202ENST00000357227 ZEB1P37275 1124 aaPredicted RBP24.99■■□□□ 1.59
CDK16-202ENST00000357227 DCAF1Q9Y4B6 1507 aa24.98■■□□□ 1.59
CDK16-202ENST00000357227 LOC105371045A0A1W2PR82 267 aa24.88■■□□□ 1.57
CDK16-202ENST00000357227 DCAF8L2P0C7V8 631 aa24.87■■□□□ 1.57
CDK16-202ENST00000357227 CCDC180Q9P1Z9 1646 aa24.83■■□□□ 1.56
CDK16-202ENST00000357227 BCL11AQ9H165 835 aa24.74■■□□□ 1.55
CDK16-202ENST00000357227 CENPBP07199 599 aaPredicted RBP24.73■■□□□ 1.55
CDK16-202ENST00000357227 TTBK1Q5TCY1 1321 aaPredicted RBP24.69■■□□□ 1.54
CDK16-202ENST00000357227 FAM9AQ8IZU1 332 aaPredicted RBP24.58■■□□□ 1.53
CDK16-202ENST00000357227 DIEXFQ68CQ4 756 aaKnown RBP24.38■■□□□ 1.49
CDK16-202ENST00000357227 YTHDC1Q96MU7 727 aaKnown RBP24.33■■□□□ 1.49
CDK16-202ENST00000357227 PRKCSHP14314 528 aaPredicted RBP24.33■■□□□ 1.48
CDK16-202ENST00000357227 ZCCHC6Q5VYS8 1495 aaKnown RBP24.17■■□□□ 1.46
CDK16-202ENST00000357227 ANP32EQ9BTT0 268 aa24.16■■□□□ 1.46
CDK16-202ENST00000357227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.14■■□□□ 1.45
CDK16-202ENST00000357227 CCER1Q8TC90 406 aaPredicted RBP24.06■■□□□ 1.44
CDK16-202ENST00000357227 CSRNP3Q8WYN3 585 aa24.04■■□□□ 1.44
CDK16-202ENST00000357227 EHMT2Q96KQ7 1210 aa23.86■■□□□ 1.41
CDK16-202ENST00000357227 ABCC9O60706 1549 aa23.81■■□□□ 1.4
CDK16-202ENST00000357227 TRIM41Q8WV44 630 aa23.78■■□□□ 1.4
CDK16-202ENST00000357227 TSHZ2Q9NRE2 1034 aa23.77■■□□□ 1.4
CDK16-202ENST00000357227 MIER1Q8N108 512 aa23.73■■□□□ 1.39
CDK16-202ENST00000357227 SUPT16HQ9Y5B9 1047 aaKnown RBP23.65■■□□□ 1.38
CDK16-202ENST00000357227 ZNF316A6NFI3 1004 aaPredicted RBP23.65■■□□□ 1.38
CDK16-202ENST00000357227 ERICH6Q7L0X2 663 aa23.54■■□□□ 1.36
CDK16-202ENST00000357227 BCANQ96GW7 911 aa23.3■■□□□ 1.32
CDK16-202ENST00000357227 APLP2Q06481 763 aa23.27■■□□□ 1.32
CDK16-202ENST00000357227 CLSPNQ9HAW4 1339 aa23.25■■□□□ 1.31
CDK16-202ENST00000357227 ANO8Q9HCE9 1232 aaPredicted RBP23.21■■□□□ 1.31
CDK16-202ENST00000357227 RBM19Q9Y4C8 960 aaKnown RBP23.13■■□□□ 1.29
CDK16-202ENST00000357227 MSH5O43196 834 aa23.04■■□□□ 1.28
CDK16-202ENST00000357227 SCRIBQ14160 1630 aa22.99■■□□□ 1.27
CDK16-202ENST00000357227 RSF1Q96T23 1441 aaPredicted RBP22.95■■□□□ 1.26
CDK16-202ENST00000357227 FKBP8Q14318 412 aa22.95■■□□□ 1.26
CDK16-202ENST00000357227 ITGAEP38570 1179 aa22.9■■□□□ 1.26
CDK16-202ENST00000357227 CCDC136Q96JN2 1154 aa22.88■■□□□ 1.25
CDK16-202ENST00000357227 SALL2Q9Y467 1007 aaPredicted RBP22.88■■□□□ 1.25
CDK16-202ENST00000357227 DEKP35659 375 aaKnown RBP22.87■■□□□ 1.25
CDK16-202ENST00000357227 NACADO15069 1562 aa22.78■■□□□ 1.24
CDK16-202ENST00000357227 HNRNPUL2Q1KMD3 747 aaKnown RBP22.75■■□□□ 1.23
CDK16-202ENST00000357227 KCNH8Q96L42 1107 aa22.74■■□□□ 1.23
CDK16-202ENST00000357227 RB1CC1Q8TDY2 1594 aa22.73■■□□□ 1.23
CDK16-202ENST00000357227 NEFLP07196 543 aa22.65■■□□□ 1.22
CDK16-202ENST00000357227 PABPN1Q86U42 306 aaKnown RBP eCLIP22.63■■□□□ 1.212e-6■■□□□ 12.2
CDK16-202ENST00000357227 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.63■■□□□ 1.21
CDK16-202ENST00000357227 CECR2Q9BXF3 1484 aa22.62■■□□□ 1.21
CDK16-202ENST00000357227 FANCIQ9NVI1 1328 aa22.57■■□□□ 1.2
CDK16-202ENST00000357227 MYT1LQ9UL68 1186 aa22.57■■□□□ 1.2
CDK16-202ENST00000357227 RTN4Q9NQC3 1192 aaKnown RBP22.56■■□□□ 1.2
CDK16-202ENST00000357227 NBR1Q14596 966 aa22.55■■□□□ 1.2
CDK16-202ENST00000357227 UBE2Q2Q8WVN8 375 aa22.53■■□□□ 1.2
CDK16-202ENST00000357227 IL27Q8NEV9 243 aa22.46■■□□□ 1.19
CDK16-202ENST00000357227 WRNQ14191 1432 aaPredicted RBP eCLIP22.45■■□□□ 1.18
CDK16-202ENST00000357227 MROH2BQ7Z745 1585 aa22.44■■□□□ 1.18
CDK16-202ENST00000357227 ERICH6BQ5W0A0 696 aa22.43■■□□□ 1.18
CDK16-202ENST00000357227 CDK11AQ9UQ88 783 aaPredicted RBP22.4■■□□□ 1.18
CDK16-202ENST00000357227 CEP162Q5TB80 1403 aa22.38■■□□□ 1.17
CDK16-202ENST00000357227 TRIM52Q96A61 297 aa22.37■■□□□ 1.17
CDK16-202ENST00000357227 IRX6P78412 446 aaPredicted RBP22.33■■□□□ 1.17
CDK16-202ENST00000357227 WIZO95785 1651 aa22.3■■□□□ 1.16
CDK16-202ENST00000357227 UBTFP17480 764 aaKnown RBP22.26■■□□□ 1.15
CDK16-202ENST00000357227 PAK3O75914 559 aaPredicted RBP22.24■■□□□ 1.15
CDK16-202ENST00000357227 NOP58Q9Y2X3 529 aaKnown RBP22.21■■□□□ 1.15
CDK16-202ENST00000357227 EIF5BO60841 1220 aaKnown RBP22.2■■□□□ 1.14
CDK16-202ENST00000357227 RTL5Q5HYW3 569 aaPredicted RBP22.16■■□□□ 1.14
CDK16-202ENST00000357227 RANGAP1P46060 587 aaPredicted RBP22.15■■□□□ 1.14
CDK16-202ENST00000357227 DDX10Q13206 875 aaKnown RBP22.15■■□□□ 1.14
CDK16-202ENST00000357227 UNC13AQ9UPW8 1703 aa22.15■■□□□ 1.14
CDK16-202ENST00000357227 PKNOX2Q96KN3 472 aa22.1■■□□□ 1.13
CDK16-202ENST00000357227 ABCC8Q09428 1581 aa22.09■■□□□ 1.13
CDK16-202ENST00000357227 DHX57Q6P158 1386 aaKnown RBP22.09■■□□□ 1.13
CDK16-202ENST00000357227 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
CDK16-202ENST00000357227 BICRAQ9NZM4 1560 aa22.05■■□□□ 1.12
CDK16-202ENST00000357227 TNIKQ9UKE5 1360 aa22.03■■□□□ 1.12
CDK16-202ENST00000357227 SOGA1O94964 1423 aa22.02■■□□□ 1.12
CDK16-202ENST00000357227 B4GALNT3Q6L9W6 998 aa21.93■■□□□ 1.1
CDK16-202ENST00000357227 BAZ1AQ9NRL2 1556 aaPredicted RBP21.93■■□□□ 1.1
CDK16-202ENST00000357227 HIRIP3Q9BW71 556 aaPredicted RBP21.91■■□□□ 1.1
CDK16-202ENST00000357227 RUSC2Q8N2Y8 1516 aa21.9■■□□□ 1.1
CDK16-202ENST00000357227 TIMELESSQ9UNS1 1208 aa21.88■■□□□ 1.09
CDK16-202ENST00000357227 ANP32CO43423 234 aa21.86■■□□□ 1.09
CDK16-202ENST00000357227 PLEKHG5O94827 1062 aa21.86■■□□□ 1.09
CDK16-202ENST00000357227 HNRNPUQ00839 825 aaKnown RBP eCLIP21.86■■□□□ 1.09
CDK16-202ENST00000357227 PPP4R2Q9NY27 417 aa21.86■■□□□ 1.09
CDK16-202ENST00000357227 ZBTB47Q9UFB7 747 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms