RNA–Protein interactions for RNA: ENST00000311652.9

AGAP4-201, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP4, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP4-201ENST00000311652 NISCHQ9Y2I1 1504 aa40.62■■■■■ 4.09
AGAP4-201ENST00000311652 CCDC180Q9P1Z9 1646 aa34.92■■■■□ 3.18
AGAP4-201ENST00000311652 ZCCHC6Q5VYS8 1495 aaKnown RBP34.28■■■■□ 3.08
AGAP4-201ENST00000311652 SHROOM4Q9ULL8 1493 aa33.93■■■■□ 3.02
AGAP4-201ENST00000311652 DCAF1Q9Y4B6 1507 aa33.49■■■□□ 2.95
AGAP4-201ENST00000311652 DCAF8L2P0C7V8 631 aa33.47■■■□□ 2.95
AGAP4-201ENST00000311652 SUPT5HO00267 1087 aaKnown RBP33.07■■■□□ 2.88
AGAP4-201ENST00000311652 MYO15BQ96JP2 1530 aa32.74■■■□□ 2.83
AGAP4-201ENST00000311652 ABCC9O60706 1549 aa32.45■■■□□ 2.79
AGAP4-201ENST00000311652 SCRIBQ14160 1630 aa32.39■■■□□ 2.78
AGAP4-201ENST00000311652 NACADO15069 1562 aa32.35■■■□□ 2.77
AGAP4-201ENST00000311652 CHIC1Q5VXU3 224 aa32.05■■■□□ 2.72
AGAP4-201ENST00000311652 RSF1Q96T23 1441 aaPredicted RBP31.89■■■□□ 2.7
AGAP4-201ENST00000311652 RB1CC1Q8TDY2 1594 aa31.88■■■□□ 2.69
AGAP4-201ENST00000311652 CECR2Q9BXF3 1484 aa31.59■■■□□ 2.65
AGAP4-201ENST00000311652 MROH2BQ7Z745 1585 aa31.48■■■□□ 2.63
AGAP4-201ENST00000311652 UNC13AQ9UPW8 1703 aa31.38■■■□□ 2.61
AGAP4-201ENST00000311652 WIZO95785 1651 aa31.28■■■□□ 2.6
AGAP4-201ENST00000311652 BAZ1AQ9NRL2 1556 aaPredicted RBP31.26■■■□□ 2.6
AGAP4-201ENST00000311652 SMARCA4P51532 1647 aa31.04■■■□□ 2.56
AGAP4-201ENST00000311652 BICRAQ9NZM4 1560 aa30.99■■■□□ 2.55
AGAP4-201ENST00000311652 TRIM41Q8WV44 630 aa30.96■■■□□ 2.55
AGAP4-201ENST00000311652 LOC105371045A0A1W2PR82 267 aa30.95■■■□□ 2.55
AGAP4-201ENST00000311652 TOP2AP11388 1531 aaKnown RBP30.88■■■□□ 2.53
AGAP4-201ENST00000311652 PABPN1Q86U42 306 aaKnown RBP eCLIP30.84■■■□□ 2.53
AGAP4-201ENST00000311652 EIF4G1Q04637 1599 aaKnown RBP30.74■■■□□ 2.51
AGAP4-201ENST00000311652 SMARCA2P51531 1590 aa30.67■■■□□ 2.5
AGAP4-201ENST00000311652 CCDC88BA6NC98 1476 aa30.66■■■□□ 2.5
AGAP4-201ENST00000311652 PEG3Q9GZU2 1588 aa30.57■■■□□ 2.48
AGAP4-201ENST00000311652 FAM9AQ8IZU1 332 aaPredicted RBP30.52■■■□□ 2.48
AGAP4-201ENST00000311652 PCGF6Q9BYE7 350 aa30.43■■■□□ 2.46
AGAP4-201ENST00000311652 ABCC8Q09428 1581 aa30.34■■■□□ 2.45
AGAP4-201ENST00000311652 ATAD2BQ9ULI0 1458 aa30.33■■■□□ 2.45
AGAP4-201ENST00000311652 BAZ1BQ9UIG0 1483 aaKnown RBP30.21■■■□□ 2.43
AGAP4-201ENST00000311652 HRCP23327 699 aa30.19■■■□□ 2.42
AGAP4-201ENST00000311652 EHMT2Q96KQ7 1210 aa30.14■■■□□ 2.41
AGAP4-201ENST00000311652 TRIM26Q12899 539 aaPredicted RBP30.12■■■□□ 2.41
AGAP4-201ENST00000311652 WRNQ14191 1432 aaPredicted RBP eCLIP29.97■■■□□ 2.39
AGAP4-201ENST00000311652 SOGA1O94964 1423 aa29.95■■■□□ 2.38
AGAP4-201ENST00000311652 EEA1Q15075 1411 aa29.92■■■□□ 2.38
AGAP4-201ENST00000311652 NCAPD3P42695 1498 aa29.89■■■□□ 2.38
AGAP4-201ENST00000311652 HMGXB3Q12766 1538 aa29.88■■■□□ 2.37
AGAP4-201ENST00000311652 SYNJ1O43426 1573 aa29.84■■■□□ 2.37
AGAP4-201ENST00000311652 RUSC2Q8N2Y8 1516 aa29.81■■■□□ 2.36
AGAP4-201ENST00000311652 CSRNP3Q8WYN3 585 aa29.79■■■□□ 2.36
AGAP4-201ENST00000311652 TNIKQ9UKE5 1360 aa29.69■■■□□ 2.34
AGAP4-201ENST00000311652 CEP162Q5TB80 1403 aa29.62■■■□□ 2.33
AGAP4-201ENST00000311652 GOLGA3Q08378 1498 aa29.6■■■□□ 2.33
AGAP4-201ENST00000311652 TOP2BQ02880 1626 aa29.6■■■□□ 2.33
AGAP4-201ENST00000311652 BIVM-ERCC5R4GMW8 1640 aa29.54■■■□□ 2.32
AGAP4-201ENST00000311652 UBTFP17480 764 aaKnown RBP29.52■■■□□ 2.32
AGAP4-201ENST00000311652 KIF21BO75037 1637 aa29.52■■■□□ 2.32
AGAP4-201ENST00000311652 CEP164Q9UPV0 1460 aa29.5■■■□□ 2.31
AGAP4-201ENST00000311652 CFTRP13569 1480 aa29.48■■■□□ 2.31
AGAP4-201ENST00000311652 PPARGC1BQ86YN6 1023 aaKnown RBP29.47■■■□□ 2.31
AGAP4-201ENST00000311652 CUX1P39880 1505 aa29.36■■■□□ 2.29
AGAP4-201ENST00000311652 PRDM2Q13029 1718 aa29.35■■■□□ 2.29
AGAP4-201ENST00000311652 CC2D2AQ9P2K1 1620 aa29.33■■■□□ 2.29
AGAP4-201ENST00000311652 ZEB1P37275 1124 aaPredicted RBP29.3■■■□□ 2.28
AGAP4-201ENST00000311652 RAPGEF2Q9Y4G8 1499 aa29.27■■■□□ 2.28
AGAP4-201ENST00000311652 CADPSQ9ULU8 1353 aa29.22■■■□□ 2.27
AGAP4-201ENST00000311652 CLIP1P30622 1438 aa29.19■■■□□ 2.26
AGAP4-201ENST00000311652 PRXQ9BXM0 1461 aa29.14■■■□□ 2.26
AGAP4-201ENST00000311652 ERICH3Q5RHP9 1530 aa29.14■■■□□ 2.26
AGAP4-201ENST00000311652 KIF27Q86VH2 1401 aa29.12■■■□□ 2.25
AGAP4-201ENST00000311652 TTBK1Q5TCY1 1321 aaPredicted RBP29.06■■■□□ 2.24
AGAP4-201ENST00000311652 VPS8Q8N3P4 1428 aa29.04■■■□□ 2.24
AGAP4-201ENST00000311652 FANCD2Q9BXW9 1451 aa28.91■■■□□ 2.22
AGAP4-201ENST00000311652 FGD5Q6ZNL6 1462 aa28.9■■■□□ 2.22
AGAP4-201ENST00000311652 RANGAP1P46060 587 aaPredicted RBP28.89■■■□□ 2.22
AGAP4-201ENST00000311652 CUX2O14529 1486 aa28.89■■■□□ 2.21
AGAP4-201ENST00000311652 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.88■■■□□ 2.21
AGAP4-201ENST00000311652 CCER1Q8TC90 406 aaPredicted RBP28.82■■■□□ 2.2
AGAP4-201ENST00000311652 IGF1RP08069 1367 aa28.81■■■□□ 2.2
AGAP4-201ENST00000311652 APLP2Q06481 763 aa28.8■■■□□ 2.2
AGAP4-201ENST00000311652 ARAP1Q96P48 1450 aa28.8■■■□□ 2.2
AGAP4-201ENST00000311652 NESP48681 1621 aa28.78■■■□□ 2.2
AGAP4-201ENST00000311652 DNMBPQ6XZF7 1577 aa28.77■■■□□ 2.2
AGAP4-201ENST00000311652 LAMC3Q9Y6N6 1575 aa28.71■■■□□ 2.19
AGAP4-201ENST00000311652 TOPBP1Q92547 1522 aa28.7■■■□□ 2.18
AGAP4-201ENST00000311652 CARMIL1Q5VZK9 1371 aa28.68■■■□□ 2.18
AGAP4-201ENST00000311652 ARHGAP35Q9NRY4 1499 aa28.64■■■□□ 2.18
AGAP4-201ENST00000311652 POLA1P09884 1462 aaPredicted RBP28.63■■■□□ 2.17
AGAP4-201ENST00000311652 ABCA10Q8WWZ4 1543 aa28.62■■■□□ 2.17
AGAP4-201ENST00000311652 RAD54L2Q9Y4B4 1467 aa28.6■■■□□ 2.17
AGAP4-201ENST00000311652 URB2Q14146 1524 aaKnown RBP28.52■■■□□ 2.16
AGAP4-201ENST00000311652 HNRNPUL2Q1KMD3 747 aaKnown RBP28.51■■■□□ 2.16
AGAP4-201ENST00000311652 DNAJC5BQ9UF47 199 aa28.5■■■□□ 2.15
AGAP4-201ENST00000311652 PDS5BQ9NTI5 1447 aa28.49■■■□□ 2.15
AGAP4-201ENST00000311652 KANK4Q5T7N3 995 aaPredicted RBP28.47■■■□□ 2.15
AGAP4-201ENST00000311652 WDR97A6NE52 1622 aa28.44■■■□□ 2.14
AGAP4-201ENST00000311652 CUL7Q14999 1698 aa28.43■■■□□ 2.14
AGAP4-201ENST00000311652 KIF21AQ7Z4S6 1674 aa28.39■■■□□ 2.13
AGAP4-201ENST00000311652 MAP3K1Q13233 1512 aa28.32■■■□□ 2.12
AGAP4-201ENST00000311652 ABCA5Q8WWZ7 1642 aa28.32■■■□□ 2.12
AGAP4-201ENST00000311652 RRBP1Q9P2E9 1410 aaKnown RBP28.31■■■□□ 2.12
AGAP4-201ENST00000311652 TIAM1Q13009 1591 aa28.28■■■□□ 2.12
AGAP4-201ENST00000311652 CTTNBP2Q8WZ74 1663 aa28.28■■■□□ 2.12
AGAP4-201ENST00000311652 FHAD1B1AJZ9 1412 aa28.26■■■□□ 2.11
AGAP4-201ENST00000311652 TDRD9Q8NDG6 1382 aaKnown RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms