RNA–Protein interactions for RNA: ENST00000620401.4

HNRNPM-217, Transcript of heterogeneous nuclear ribonucleoprotein M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPM, Length 2,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPM-217ENST00000620401 NISCHQ9Y2I1 1504 aa38.29■■■■□ 3.72
HNRNPM-217ENST00000620401 CCDC180Q9P1Z9 1646 aa32.96■■■□□ 2.87
HNRNPM-217ENST00000620401 ZCCHC6Q5VYS8 1495 aaKnown RBP32.23■■■□□ 2.75
HNRNPM-217ENST00000620401 SHROOM4Q9ULL8 1493 aa31.94■■■□□ 2.7
HNRNPM-217ENST00000620401 DCAF8L2P0C7V8 631 aa31.86■■■□□ 2.69
HNRNPM-217ENST00000620401 DCAF1Q9Y4B6 1507 aa31.48■■■□□ 2.63
HNRNPM-217ENST00000620401 ABCC9O60706 1549 aa31.12■■■□□ 2.57
HNRNPM-217ENST00000620401 SUPT5HO00267 1087 aaKnown RBP30.97■■■□□ 2.55
HNRNPM-217ENST00000620401 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
HNRNPM-217ENST00000620401 SCRIBQ14160 1630 aa30.67■■■□□ 2.5
HNRNPM-217ENST00000620401 NACADO15069 1562 aa30.65■■■□□ 2.5
HNRNPM-217ENST00000620401 RB1CC1Q8TDY2 1594 aa30.31■■■□□ 2.44
HNRNPM-217ENST00000620401 RSF1Q96T23 1441 aaPredicted RBP29.98■■■□□ 2.39
HNRNPM-217ENST00000620401 CECR2Q9BXF3 1484 aa29.89■■■□□ 2.38
HNRNPM-217ENST00000620401 UNC13AQ9UPW8 1703 aa29.82■■■□□ 2.36
HNRNPM-217ENST00000620401 CHIC1Q5VXU3 224 aa29.78■■■□□ 2.36
HNRNPM-217ENST00000620401 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.35
HNRNPM-217ENST00000620401 PABPN1Q86U42 306 aaKnown RBP eCLIP29.58■■■□□ 2.33
HNRNPM-217ENST00000620401 BICRAQ9NZM4 1560 aa29.5■■■□□ 2.31
HNRNPM-217ENST00000620401 WIZO95785 1651 aa29.49■■■□□ 2.31
HNRNPM-217ENST00000620401 BAZ1AQ9NRL2 1556 aaPredicted RBP29.47■■■□□ 2.31
HNRNPM-217ENST00000620401 SMARCA4P51532 1647 aa29.32■■■□□ 2.28
HNRNPM-217ENST00000620401 TOP2AP11388 1531 aaKnown RBP29.05■■■□□ 2.24
HNRNPM-217ENST00000620401 TRIM41Q8WV44 630 aa28.94■■■□□ 2.22
HNRNPM-217ENST00000620401 CCDC88BA6NC98 1476 aa28.9■■■□□ 2.22
HNRNPM-217ENST00000620401 SMARCA2P51531 1590 aa28.86■■■□□ 2.21
HNRNPM-217ENST00000620401 PEG3Q9GZU2 1588 aa28.83■■■□□ 2.21
HNRNPM-217ENST00000620401 LOC105371045A0A1W2PR82 267 aa28.83■■■□□ 2.21
HNRNPM-217ENST00000620401 EIF4G1Q04637 1599 aaKnown RBP28.77■■■□□ 2.2
HNRNPM-217ENST00000620401 ATAD2BQ9ULI0 1458 aa28.76■■■□□ 2.19
HNRNPM-217ENST00000620401 HRCP23327 699 aa28.73■■■□□ 2.19
HNRNPM-217ENST00000620401 FAM9AQ8IZU1 332 aaPredicted RBP28.62■■■□□ 2.17
HNRNPM-217ENST00000620401 BAZ1BQ9UIG0 1483 aaKnown RBP28.62■■■□□ 2.17
HNRNPM-217ENST00000620401 ABCC8Q09428 1581 aa28.52■■■□□ 2.16
HNRNPM-217ENST00000620401 NCAPD3P42695 1498 aa28.37■■■□□ 2.13
HNRNPM-217ENST00000620401 EHMT2Q96KQ7 1210 aa28.35■■■□□ 2.13
HNRNPM-217ENST00000620401 HMGXB3Q12766 1538 aa28.29■■■□□ 2.12
HNRNPM-217ENST00000620401 PCGF6Q9BYE7 350 aa28.26■■■□□ 2.11
HNRNPM-217ENST00000620401 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
HNRNPM-217ENST00000620401 PPARGC1BQ86YN6 1023 aaKnown RBP28.17■■■□□ 2.1
HNRNPM-217ENST00000620401 SOGA1O94964 1423 aa28.11■■■□□ 2.09
HNRNPM-217ENST00000620401 SYNJ1O43426 1573 aa28.06■■■□□ 2.08
HNRNPM-217ENST00000620401 CC2D2AQ9P2K1 1620 aa28.05■■■□□ 2.08
HNRNPM-217ENST00000620401 RUSC2Q8N2Y8 1516 aa28.02■■■□□ 2.08
HNRNPM-217ENST00000620401 CFTRP13569 1480 aa27.91■■■□□ 2.06
HNRNPM-217ENST00000620401 CSRNP3Q8WYN3 585 aa27.9■■■□□ 2.06
HNRNPM-217ENST00000620401 EEA1Q15075 1411 aa27.87■■■□□ 2.05
HNRNPM-217ENST00000620401 TOP2BQ02880 1626 aa27.81■■■□□ 2.04
HNRNPM-217ENST00000620401 CADPSQ9ULU8 1353 aa27.75■■■□□ 2.03
HNRNPM-217ENST00000620401 BIVM-ERCC5R4GMW8 1640 aa27.72■■■□□ 2.03
HNRNPM-217ENST00000620401 CUX1P39880 1505 aa27.71■■■□□ 2.03
HNRNPM-217ENST00000620401 TRIM26Q12899 539 aaPredicted RBP27.68■■■□□ 2.02
HNRNPM-217ENST00000620401 UBTFP17480 764 aaKnown RBP27.67■■■□□ 2.02
HNRNPM-217ENST00000620401 TNIKQ9UKE5 1360 aa27.64■■■□□ 2.02
HNRNPM-217ENST00000620401 PRDM2Q13029 1718 aa27.63■■■□□ 2.01
HNRNPM-217ENST00000620401 GOLGA3Q08378 1498 aa27.61■■■□□ 2.01
HNRNPM-217ENST00000620401 CEP162Q5TB80 1403 aa27.6■■■□□ 2.01
HNRNPM-217ENST00000620401 DNAJC5BQ9UF47 199 aa27.56■■■□□ 2
HNRNPM-217ENST00000620401 CEP164Q9UPV0 1460 aa27.55■■■□□ 2
HNRNPM-217ENST00000620401 KIF21BO75037 1637 aa27.52■■■□□ 2
HNRNPM-217ENST00000620401 NESP48681 1621 aa27.5■■□□□ 1.99
HNRNPM-217ENST00000620401 RAPGEF2Q9Y4G8 1499 aa27.47■■□□□ 1.99
HNRNPM-217ENST00000620401 FANCD2Q9BXW9 1451 aa27.45■■□□□ 1.99
HNRNPM-217ENST00000620401 KIF27Q86VH2 1401 aa27.38■■□□□ 1.97
HNRNPM-217ENST00000620401 PELP1Q8IZL8 1130 aaKnown RBP27.35■■□□□ 1.97
HNRNPM-217ENST00000620401 FGD5Q6ZNL6 1462 aa27.33■■□□□ 1.97
HNRNPM-217ENST00000620401 PRXQ9BXM0 1461 aa27.32■■□□□ 1.96
HNRNPM-217ENST00000620401 RANGAP1P46060 587 aaPredicted RBP27.28■■□□□ 1.96
HNRNPM-217ENST00000620401 CUX2O14529 1486 aa27.27■■□□□ 1.96
HNRNPM-217ENST00000620401 LAMC3Q9Y6N6 1575 aa27.27■■□□□ 1.96
HNRNPM-217ENST00000620401 CLIP1P30622 1438 aa27.26■■□□□ 1.96
HNRNPM-217ENST00000620401 ERICH3Q5RHP9 1530 aa27.23■■□□□ 1.95
HNRNPM-217ENST00000620401 TTBK1Q5TCY1 1321 aaPredicted RBP27.22■■□□□ 1.95
HNRNPM-217ENST00000620401 TOPBP1Q92547 1522 aa27.2■■□□□ 1.94
HNRNPM-217ENST00000620401 DNMBPQ6XZF7 1577 aa27.2■■□□□ 1.94
HNRNPM-217ENST00000620401 IGF1RP08069 1367 aa27.18■■□□□ 1.94
HNRNPM-217ENST00000620401 RAD54L2Q9Y4B4 1467 aa27.15■■□□□ 1.94
HNRNPM-217ENST00000620401 POLA1P09884 1462 aaPredicted RBP27.13■■□□□ 1.93
HNRNPM-217ENST00000620401 PDS5BQ9NTI5 1447 aa27.11■■□□□ 1.93
HNRNPM-217ENST00000620401 URB2Q14146 1524 aaKnown RBP27.11■■□□□ 1.93
HNRNPM-217ENST00000620401 ZEB1P37275 1124 aaPredicted RBP27.09■■□□□ 1.93
HNRNPM-217ENST00000620401 SCAF1Q9H7N4 1312 aaKnown RBP27.08■■□□□ 1.92
HNRNPM-217ENST00000620401 VPS8Q8N3P4 1428 aa27.05■■□□□ 1.92
HNRNPM-217ENST00000620401 CARMIL1Q5VZK9 1371 aa27.03■■□□□ 1.92
HNRNPM-217ENST00000620401 KIF21AQ7Z4S6 1674 aa27.03■■□□□ 1.92
HNRNPM-217ENST00000620401 ABCA10Q8WWZ4 1543 aa27.02■■□□□ 1.92
HNRNPM-217ENST00000620401 ARAP1Q96P48 1450 aa26.93■■□□□ 1.9
HNRNPM-217ENST00000620401 TDRD9Q8NDG6 1382 aaKnown RBP26.87■■□□□ 1.89
HNRNPM-217ENST00000620401 APLP2Q06481 763 aa26.86■■□□□ 1.89
HNRNPM-217ENST00000620401 ARHGAP35Q9NRY4 1499 aa26.84■■□□□ 1.89
HNRNPM-217ENST00000620401 WDR97A6NE52 1622 aa26.83■■□□□ 1.89
HNRNPM-217ENST00000620401 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
HNRNPM-217ENST00000620401 ABCA5Q8WWZ7 1642 aa26.74■■□□□ 1.87
HNRNPM-217ENST00000620401 MRC2Q9UBG0 1479 aa26.73■■□□□ 1.87
HNRNPM-217ENST00000620401 CUL7Q14999 1698 aa26.72■■□□□ 1.87
HNRNPM-217ENST00000620401 TARBP1Q13395 1621 aaKnown RBP26.72■■□□□ 1.87
HNRNPM-217ENST00000620401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.72■■□□□ 1.87
HNRNPM-217ENST00000620401 KANK4Q5T7N3 995 aaPredicted RBP26.67■■□□□ 1.86
HNRNPM-217ENST00000620401 P3H3Q8IVL6 736 aa26.65■■□□□ 1.86
HNRNPM-217ENST00000620401 AQRO60306 1485 aaKnown RBP eCLIP26.6■■□□□ 1.852e-8■■■■□ 23.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms