RNA–Protein interactions for RNA: ENST00000587166.5

SSC5D-202, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSC5D, Length 3,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-202ENST00000587166 NISCHQ9Y2I1 1504 aa35.32■■■■□ 3.24
SSC5D-202ENST00000587166 SHROOM4Q9ULL8 1493 aa30.79■■■□□ 2.52
SSC5D-202ENST00000587166 SUPT5HO00267 1087 aaKnown RBP30.39■■■□□ 2.46
SSC5D-202ENST00000587166 DCAF8L2P0C7V8 631 aa30.01■■■□□ 2.39
SSC5D-202ENST00000587166 ZCCHC6Q5VYS8 1495 aaKnown RBP29.88■■■□□ 2.37
SSC5D-202ENST00000587166 CCDC180Q9P1Z9 1646 aa29.65■■■□□ 2.34
SSC5D-202ENST00000587166 CHIC1Q5VXU3 224 aa29.48■■■□□ 2.31
SSC5D-202ENST00000587166 MYO15BQ96JP2 1530 aa29.35■■■□□ 2.29
SSC5D-202ENST00000587166 HRCP23327 699 aa29.12■■■□□ 2.25
SSC5D-202ENST00000587166 PCGF6Q9BYE7 350 aa29.07■■■□□ 2.24
SSC5D-202ENST00000587166 LOC105371045A0A1W2PR82 267 aa28.78■■■□□ 2.2
SSC5D-202ENST00000587166 DCAF1Q9Y4B6 1507 aa28.78■■■□□ 2.2
SSC5D-202ENST00000587166 PPARGC1BQ86YN6 1023 aaKnown RBP28.63■■■□□ 2.17
SSC5D-202ENST00000587166 ABCC9O60706 1549 aa28.32■■■□□ 2.12
SSC5D-202ENST00000587166 TRIM26Q12899 539 aaPredicted RBP28.29■■■□□ 2.12
SSC5D-202ENST00000587166 SCRIBQ14160 1630 aa28.19■■■□□ 2.1
SSC5D-202ENST00000587166 TRIM41Q8WV44 630 aa28.18■■■□□ 2.1
SSC5D-202ENST00000587166 RSF1Q96T23 1441 aaPredicted RBP28.16■■■□□ 2.1
SSC5D-202ENST00000587166 FAM9AQ8IZU1 332 aaPredicted RBP28.14■■■□□ 2.1
SSC5D-202ENST00000587166 EHMT2Q96KQ7 1210 aa28.04■■■□□ 2.08
SSC5D-202ENST00000587166 RB1CC1Q8TDY2 1594 aa27.88■■■□□ 2.05
SSC5D-202ENST00000587166 ZEB1P37275 1124 aaPredicted RBP27.77■■■□□ 2.04
SSC5D-202ENST00000587166 CECR2Q9BXF3 1484 aa27.66■■■□□ 2.02
SSC5D-202ENST00000587166 NACADO15069 1562 aa27.57■■■□□ 2
SSC5D-202ENST00000587166 MROH2BQ7Z745 1585 aa27.54■■■□□ 2
SSC5D-202ENST00000587166 WIZO95785 1651 aa27.39■■□□□ 1.98
SSC5D-202ENST00000587166 PABPN1Q86U42 306 aaKnown RBP eCLIP27.27■■□□□ 1.96
SSC5D-202ENST00000587166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.25■■□□□ 1.95
SSC5D-202ENST00000587166 CCER1Q8TC90 406 aaPredicted RBP27.21■■□□□ 1.95
SSC5D-202ENST00000587166 TTBK1Q5TCY1 1321 aaPredicted RBP27.19■■□□□ 1.94
SSC5D-202ENST00000587166 BAZ1AQ9NRL2 1556 aaPredicted RBP27.13■■□□□ 1.93
SSC5D-202ENST00000587166 SCAF1Q9H7N4 1312 aaKnown RBP27.07■■□□□ 1.92
SSC5D-202ENST00000587166 PELP1Q8IZL8 1130 aaKnown RBP27.03■■□□□ 1.92
SSC5D-202ENST00000587166 ABCC8Q09428 1581 aa26.99■■□□□ 1.91
SSC5D-202ENST00000587166 CCDC88BA6NC98 1476 aa26.96■■□□□ 1.91
SSC5D-202ENST00000587166 EIF4G1Q04637 1599 aaKnown RBP26.94■■□□□ 1.9
SSC5D-202ENST00000587166 UBTFP17480 764 aaKnown RBP26.88■■□□□ 1.89
SSC5D-202ENST00000587166 TOP2AP11388 1531 aaKnown RBP26.88■■□□□ 1.89
SSC5D-202ENST00000587166 SOGA1O94964 1423 aa26.85■■□□□ 1.89
SSC5D-202ENST00000587166 CEP162Q5TB80 1403 aa26.85■■□□□ 1.89
SSC5D-202ENST00000587166 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
SSC5D-202ENST00000587166 SMARCA4P51532 1647 aa26.79■■□□□ 1.88
SSC5D-202ENST00000587166 CSRNP3Q8WYN3 585 aa26.78■■□□□ 1.88
SSC5D-202ENST00000587166 DIEXFQ68CQ4 756 aaKnown RBP26.78■■□□□ 1.88
SSC5D-202ENST00000587166 SMARCA2P51531 1590 aa26.76■■□□□ 1.87
SSC5D-202ENST00000587166 WRNQ14191 1432 aaPredicted RBP eCLIP26.75■■□□□ 1.87
SSC5D-202ENST00000587166 TNIKQ9UKE5 1360 aa26.73■■□□□ 1.87
SSC5D-202ENST00000587166 ACIN1Q9UKV3 1341 aaKnown RBP26.7■■□□□ 1.87
SSC5D-202ENST00000587166 NEUROD1Q13562 356 aa26.68■■□□□ 1.86
SSC5D-202ENST00000587166 RUSC2Q8N2Y8 1516 aa26.68■■□□□ 1.86
SSC5D-202ENST00000587166 EEA1Q15075 1411 aa26.59■■□□□ 1.85
SSC5D-202ENST00000587166 CENPBP07199 599 aaPredicted RBP26.57■■□□□ 1.84
SSC5D-202ENST00000587166 BICRAQ9NZM4 1560 aa26.56■■□□□ 1.84
SSC5D-202ENST00000587166 GOLGA3Q08378 1498 aa26.51■■□□□ 1.83
SSC5D-202ENST00000587166 HNRNPUL2Q1KMD3 747 aaKnown RBP26.5■■□□□ 1.83
SSC5D-202ENST00000587166 GTF3C3Q9Y5Q9 886 aa26.49■■□□□ 1.83
SSC5D-202ENST00000587166 RANGAP1P46060 587 aaPredicted RBP26.45■■□□□ 1.82
SSC5D-202ENST00000587166 ZNF316A6NFI3 1004 aaPredicted RBP26.44■■□□□ 1.82
SSC5D-202ENST00000587166 APLP2Q06481 763 aa26.36■■□□□ 1.81
SSC5D-202ENST00000587166 YTHDC1Q96MU7 727 aaKnown RBP26.34■■□□□ 1.81
SSC5D-202ENST00000587166 CEP164Q9UPV0 1460 aa26.32■■□□□ 1.8
SSC5D-202ENST00000587166 CLIP1P30622 1438 aa26.31■■□□□ 1.8
SSC5D-202ENST00000587166 SYNJ1O43426 1573 aa26.25■■□□□ 1.79
SSC5D-202ENST00000587166 ATAD2BQ9ULI0 1458 aa26.18■■□□□ 1.78
SSC5D-202ENST00000587166 VPS8Q8N3P4 1428 aa26.16■■□□□ 1.78
SSC5D-202ENST00000587166 MIER1Q8N108 512 aa26.15■■□□□ 1.78
SSC5D-202ENST00000587166 BAZ1BQ9UIG0 1483 aaKnown RBP26.15■■□□□ 1.78
SSC5D-202ENST00000587166 RAPGEF2Q9Y4G8 1499 aa26.14■■□□□ 1.77
SSC5D-202ENST00000587166 KIF21BO75037 1637 aa26.14■■□□□ 1.77
SSC5D-202ENST00000587166 PEG3Q9GZU2 1588 aa26.12■■□□□ 1.77
SSC5D-202ENST00000587166 KANK4Q5T7N3 995 aaPredicted RBP25.85■■□□□ 1.73
SSC5D-202ENST00000587166 TOP2BQ02880 1626 aa25.83■■□□□ 1.73
SSC5D-202ENST00000587166 MYT1Q01538 1121 aa25.8■■□□□ 1.72
SSC5D-202ENST00000587166 DHX57Q6P158 1386 aaKnown RBP25.76■■□□□ 1.71
SSC5D-202ENST00000587166 ITGAEP38570 1179 aa25.76■■□□□ 1.71
SSC5D-202ENST00000587166 PRXQ9BXM0 1461 aa25.73■■□□□ 1.71
SSC5D-202ENST00000587166 ARAP1Q96P48 1450 aa25.73■■□□□ 1.71
SSC5D-202ENST00000587166 CLSPNQ9HAW4 1339 aa25.71■■□□□ 1.71
SSC5D-202ENST00000587166 ERICH3Q5RHP9 1530 aa25.68■■□□□ 1.7
SSC5D-202ENST00000587166 KIF27Q86VH2 1401 aa25.65■■□□□ 1.7
SSC5D-202ENST00000587166 BIVM-ERCC5R4GMW8 1640 aa25.65■■□□□ 1.7
SSC5D-202ENST00000587166 NCAPD3P42695 1498 aa25.62■■□□□ 1.69
SSC5D-202ENST00000587166 CUX1P39880 1505 aa25.59■■□□□ 1.69
SSC5D-202ENST00000587166 CCNB3Q8WWL7 1395 aa25.55■■□□□ 1.68
SSC5D-202ENST00000587166 RRBP1Q9P2E9 1410 aaKnown RBP25.53■■□□□ 1.68
SSC5D-202ENST00000587166 ARHGAP35Q9NRY4 1499 aa25.48■■□□□ 1.67
SSC5D-202ENST00000587166 HMGXB3Q12766 1538 aa25.45■■□□□ 1.67
SSC5D-202ENST00000587166 ATP1B4Q9UN42 357 aaPredicted RBP25.41■■□□□ 1.66
SSC5D-202ENST00000587166 CFTRP13569 1480 aa25.41■■□□□ 1.66
SSC5D-202ENST00000587166 RAB3GAP2Q9H2M9 1393 aa25.38■■□□□ 1.65
SSC5D-202ENST00000587166 CUX2O14529 1486 aa25.38■■□□□ 1.65
SSC5D-202ENST00000587166 SUPT16HQ9Y5B9 1047 aaKnown RBP25.38■■□□□ 1.65
SSC5D-202ENST00000587166 FAM50AQ14320 339 aaKnown RBP25.37■■□□□ 1.65
SSC5D-202ENST00000587166 P3H3Q8IVL6 736 aa25.35■■□□□ 1.65
SSC5D-202ENST00000587166 IGF1RP08069 1367 aa25.34■■□□□ 1.65
SSC5D-202ENST00000587166 KCNH8Q96L42 1107 aa25.29■■□□□ 1.64
SSC5D-202ENST00000587166 CARMIL1Q5VZK9 1371 aa25.29■■□□□ 1.64
SSC5D-202ENST00000587166 CADPSQ9ULU8 1353 aa25.28■■□□□ 1.64
SSC5D-202ENST00000587166 SIN3AQ96ST3 1273 aa25.26■■□□□ 1.63
SSC5D-202ENST00000587166 CC2D2AQ9P2K1 1620 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms