RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 NISCHQ9Y2I1 1504 aa33.05■■■□□ 2.88
CHRNA5-201ENST00000299565 SHROOM4Q9ULL8 1493 aa30.38■■■□□ 2.45
CHRNA5-201ENST00000299565 SUPT5HO00267 1087 aaKnown RBP30.2■■■□□ 2.42
CHRNA5-201ENST00000299565 DCAF8L2P0C7V8 631 aa30.15■■■□□ 2.42
CHRNA5-201ENST00000299565 PCGF6Q9BYE7 350 aa28.77■■■□□ 2.2
CHRNA5-201ENST00000299565 EHMT2Q96KQ7 1210 aa28.59■■■□□ 2.17
CHRNA5-201ENST00000299565 CHIC1Q5VXU3 224 aa28.47■■■□□ 2.15
CHRNA5-201ENST00000299565 LOC105371045A0A1W2PR82 267 aa28.27■■■□□ 2.12
CHRNA5-201ENST00000299565 FAM9AQ8IZU1 332 aaPredicted RBP28.21■■■□□ 2.11
CHRNA5-201ENST00000299565 PPARGC1BQ86YN6 1023 aaKnown RBP28.19■■■□□ 2.1
CHRNA5-201ENST00000299565 HRCP23327 699 aa28.17■■■□□ 2.1
CHRNA5-201ENST00000299565 MYO15BQ96JP2 1530 aa27.87■■■□□ 2.05
CHRNA5-201ENST00000299565 ZCCHC6Q5VYS8 1495 aaKnown RBP27.76■■■□□ 2.03
CHRNA5-201ENST00000299565 TRIM41Q8WV44 630 aa27.71■■■□□ 2.03
CHRNA5-201ENST00000299565 TTBK1Q5TCY1 1321 aaPredicted RBP27.62■■■□□ 2.01
CHRNA5-201ENST00000299565 TRIM26Q12899 539 aaPredicted RBP27.48■■□□□ 1.99
CHRNA5-201ENST00000299565 CCDC180Q9P1Z9 1646 aa27.09■■□□□ 1.93
CHRNA5-201ENST00000299565 CCER1Q8TC90 406 aaPredicted RBP27.02■■□□□ 1.92
CHRNA5-201ENST00000299565 ZEB1P37275 1124 aaPredicted RBP26.99■■□□□ 1.91
CHRNA5-201ENST00000299565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.92■■□□□ 1.9
CHRNA5-201ENST00000299565 RANGAP1P46060 587 aaPredicted RBP26.87■■□□□ 1.89
CHRNA5-201ENST00000299565 DCAF1Q9Y4B6 1507 aa26.87■■□□□ 1.89
CHRNA5-201ENST00000299565 ABCC9O60706 1549 aa26.77■■□□□ 1.88
CHRNA5-201ENST00000299565 SCRIBQ14160 1630 aa26.77■■□□□ 1.88
CHRNA5-201ENST00000299565 UBTFP17480 764 aaKnown RBP26.72■■□□□ 1.87
CHRNA5-201ENST00000299565 RSF1Q96T23 1441 aaPredicted RBP26.61■■□□□ 1.85
CHRNA5-201ENST00000299565 YTHDC1Q96MU7 727 aaKnown RBP26.53■■□□□ 1.84
CHRNA5-201ENST00000299565 HNRNPUL2Q1KMD3 747 aaKnown RBP26.37■■□□□ 1.81
CHRNA5-201ENST00000299565 APLP2Q06481 763 aa26.35■■□□□ 1.81
CHRNA5-201ENST00000299565 PABPN1Q86U42 306 aaKnown RBP eCLIP26.31■■□□□ 1.8
CHRNA5-201ENST00000299565 DIEXFQ68CQ4 756 aaKnown RBP26.3■■□□□ 1.8
CHRNA5-201ENST00000299565 SCAF1Q9H7N4 1312 aaKnown RBP26.29■■□□□ 1.8
CHRNA5-201ENST00000299565 CENPBP07199 599 aaPredicted RBP26.28■■□□□ 1.8
CHRNA5-201ENST00000299565 CECR2Q9BXF3 1484 aa26.27■■□□□ 1.8
CHRNA5-201ENST00000299565 RB1CC1Q8TDY2 1594 aa26.25■■□□□ 1.79
CHRNA5-201ENST00000299565 GTF3C3Q9Y5Q9 886 aa26.11■■□□□ 1.77
CHRNA5-201ENST00000299565 NEUROD1Q13562 356 aa26.07■■□□□ 1.76
CHRNA5-201ENST00000299565 PELP1Q8IZL8 1130 aaKnown RBP26.05■■□□□ 1.76
CHRNA5-201ENST00000299565 ACIN1Q9UKV3 1341 aaKnown RBP25.99■■□□□ 1.75
CHRNA5-201ENST00000299565 CSRNP3Q8WYN3 585 aa25.97■■□□□ 1.75
CHRNA5-201ENST00000299565 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
CHRNA5-201ENST00000299565 ITGAEP38570 1179 aa25.94■■□□□ 1.74
CHRNA5-201ENST00000299565 ATP1B4Q9UN42 357 aaPredicted RBP25.78■■□□□ 1.72
CHRNA5-201ENST00000299565 ZNF316A6NFI3 1004 aaPredicted RBP25.78■■□□□ 1.72
CHRNA5-201ENST00000299565 WIZO95785 1651 aa25.74■■□□□ 1.71
CHRNA5-201ENST00000299565 SOGA1O94964 1423 aa25.71■■□□□ 1.71
CHRNA5-201ENST00000299565 ABCC8Q09428 1581 aa25.7■■□□□ 1.7
CHRNA5-201ENST00000299565 CEP162Q5TB80 1403 aa25.7■■□□□ 1.7
CHRNA5-201ENST00000299565 CCDC88BA6NC98 1476 aa25.65■■□□□ 1.7
CHRNA5-201ENST00000299565 MIER1Q8N108 512 aa25.59■■□□□ 1.69
CHRNA5-201ENST00000299565 NACADO15069 1562 aa25.54■■□□□ 1.68
CHRNA5-201ENST00000299565 RUSC2Q8N2Y8 1516 aa25.46■■□□□ 1.67
CHRNA5-201ENST00000299565 TNIKQ9UKE5 1360 aa25.39■■□□□ 1.66
CHRNA5-201ENST00000299565 BAZ1AQ9NRL2 1556 aaPredicted RBP25.39■■□□□ 1.65
CHRNA5-201ENST00000299565 CLIP1P30622 1438 aa25.32■■□□□ 1.64
CHRNA5-201ENST00000299565 WRNQ14191 1432 aaPredicted RBP eCLIP25.3■■□□□ 1.64
CHRNA5-201ENST00000299565 P3H3Q8IVL6 736 aa25.26■■□□□ 1.63
CHRNA5-201ENST00000299565 GOLGA3Q08378 1498 aa25.24■■□□□ 1.63
CHRNA5-201ENST00000299565 BCANQ96GW7 911 aa25.23■■□□□ 1.63
CHRNA5-201ENST00000299565 FAM50AQ14320 339 aaKnown RBP25.23■■□□□ 1.63
CHRNA5-201ENST00000299565 EEA1Q15075 1411 aa25.09■■□□□ 1.61
CHRNA5-201ENST00000299565 HIRIP3Q9BW71 556 aaPredicted RBP25.08■■□□□ 1.61
CHRNA5-201ENST00000299565 TOP2AP11388 1531 aaKnown RBP25.07■■□□□ 1.6
CHRNA5-201ENST00000299565 KANK4Q5T7N3 995 aaPredicted RBP25.05■■□□□ 1.6
CHRNA5-201ENST00000299565 CEP164Q9UPV0 1460 aa25.01■■□□□ 1.59
CHRNA5-201ENST00000299565 CNGB1Q14028 1251 aaPredicted RBP24.97■■□□□ 1.59
CHRNA5-201ENST00000299565 SMARCA4P51532 1647 aa24.96■■□□□ 1.59
CHRNA5-201ENST00000299565 SMARCA2P51531 1590 aa24.96■■□□□ 1.59
CHRNA5-201ENST00000299565 DDX10Q13206 875 aaKnown RBP24.95■■□□□ 1.59
CHRNA5-201ENST00000299565 RAPGEF2Q9Y4G8 1499 aa24.91■■□□□ 1.58
CHRNA5-201ENST00000299565 NEFLP07196 543 aa24.9■■□□□ 1.58
CHRNA5-201ENST00000299565 BAZ1BQ9UIG0 1483 aaKnown RBP24.89■■□□□ 1.57
CHRNA5-201ENST00000299565 VPS8Q8N3P4 1428 aa24.88■■□□□ 1.57
CHRNA5-201ENST00000299565 SIN3AQ96ST3 1273 aa24.8■■□□□ 1.56
CHRNA5-201ENST00000299565 ARID3CA6NKF2 412 aa24.79■■□□□ 1.56
CHRNA5-201ENST00000299565 TRIM52Q96A61 297 aa24.79■■□□□ 1.56
CHRNA5-201ENST00000299565 KCNH8Q96L42 1107 aa24.76■■□□□ 1.56
CHRNA5-201ENST00000299565 MYT1Q01538 1121 aa24.75■■□□□ 1.55
CHRNA5-201ENST00000299565 FKBP8Q14318 412 aa24.74■■□□□ 1.55
CHRNA5-201ENST00000299565 SUPT16HQ9Y5B9 1047 aaKnown RBP24.68■■□□□ 1.54
CHRNA5-201ENST00000299565 POLR3GLQ9BT43 218 aa24.68■■□□□ 1.54
CHRNA5-201ENST00000299565 ANP32CO43423 234 aa24.62■■□□□ 1.53
CHRNA5-201ENST00000299565 DHX57Q6P158 1386 aaKnown RBP24.61■■□□□ 1.53
CHRNA5-201ENST00000299565 SYNJ1O43426 1573 aa24.61■■□□□ 1.53
CHRNA5-201ENST00000299565 ATAD2BQ9ULI0 1458 aa24.61■■□□□ 1.53
CHRNA5-201ENST00000299565 CCNB3Q8WWL7 1395 aa24.58■■□□□ 1.53
CHRNA5-201ENST00000299565 KIF27Q86VH2 1401 aa24.56■■□□□ 1.52
CHRNA5-201ENST00000299565 CHIC2Q9UKJ5 165 aa24.54■■□□□ 1.52
CHRNA5-201ENST00000299565 IRX6P78412 446 aaPredicted RBP24.52■■□□□ 1.52
CHRNA5-201ENST00000299565 EIF4G1Q04637 1599 aaKnown RBP24.5■■□□□ 1.51
CHRNA5-201ENST00000299565 ERICH6Q7L0X2 663 aa24.48■■□□□ 1.51
CHRNA5-201ENST00000299565 KIF21BO75037 1637 aa24.48■■□□□ 1.51
CHRNA5-201ENST00000299565 RAB3GAP2Q9H2M9 1393 aa24.46■■□□□ 1.51
CHRNA5-201ENST00000299565 CLSPNQ9HAW4 1339 aa24.45■■□□□ 1.5
CHRNA5-201ENST00000299565 TONSLQ96HA7 1378 aa24.42■■□□□ 1.5
CHRNA5-201ENST00000299565 CUX2O14529 1486 aa24.41■■□□□ 1.5
CHRNA5-201ENST00000299565 HNRNPUQ00839 825 aaKnown RBP eCLIP24.4■■□□□ 1.5
CHRNA5-201ENST00000299565 SENP3-EIF4A1A0A087X0R7 540 aa24.39■■□□□ 1.5
CHRNA5-201ENST00000299565 ZNF326Q5BKZ1 582 aaKnown RBP24.37■■□□□ 1.49
CHRNA5-201ENST00000299565 RRP7BPQ9NSQ0 103 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms