RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 DCAF8L2P0C7V8 631 aa28.33■■■□□ 2.12
SHTN1-202ENST00000355371 NISCHQ9Y2I1 1504 aa27.8■■■□□ 2.04
SHTN1-202ENST00000355371 SUPT5HO00267 1087 aaKnown RBP27.02■■□□□ 1.92
SHTN1-202ENST00000355371 SHROOM4Q9ULL8 1493 aa26.59■■□□□ 1.85
SHTN1-202ENST00000355371 EHMT2Q96KQ7 1210 aa25.86■■□□□ 1.73
SHTN1-202ENST00000355371 APLP2Q06481 763 aa25.71■■□□□ 1.71
SHTN1-202ENST00000355371 PELP1Q8IZL8 1130 aaKnown RBP25.5■■□□□ 1.67
SHTN1-202ENST00000355371 FAM9AQ8IZU1 332 aaPredicted RBP25.41■■□□□ 1.66
SHTN1-202ENST00000355371 PCGF6Q9BYE7 350 aa25.19■■□□□ 1.62
SHTN1-202ENST00000355371 TRIM41Q8WV44 630 aa25.17■■□□□ 1.62
SHTN1-202ENST00000355371 ZEB1P37275 1124 aaPredicted RBP25.03■■□□□ 1.6
SHTN1-202ENST00000355371 TTBK1Q5TCY1 1321 aaPredicted RBP25.03■■□□□ 1.6
SHTN1-202ENST00000355371 RANGAP1P46060 587 aaPredicted RBP24.83■■□□□ 1.57
SHTN1-202ENST00000355371 CCER1Q8TC90 406 aaPredicted RBP24.8■■□□□ 1.56
SHTN1-202ENST00000355371 UBTFP17480 764 aaKnown RBP24.79■■□□□ 1.56
SHTN1-202ENST00000355371 CENPBP07199 599 aaPredicted RBP24.74■■□□□ 1.55
SHTN1-202ENST00000355371 ATP1B4Q9UN42 357 aaPredicted RBP24.67■■□□□ 1.54
SHTN1-202ENST00000355371 TRIM26Q12899 539 aaPredicted RBP24.35■■□□□ 1.49
SHTN1-202ENST00000355371 ERICH6Q7L0X2 663 aa24.27■■□□□ 1.48
SHTN1-202ENST00000355371 NEFLP07196 543 aa24.18■■□□□ 1.46
SHTN1-202ENST00000355371 PPARGC1BQ86YN6 1023 aaKnown RBP24.17■■□□□ 1.46
SHTN1-202ENST00000355371 CHIC1Q5VXU3 224 aa24.17■■□□□ 1.46
SHTN1-202ENST00000355371 YTHDC1Q96MU7 727 aaKnown RBP24.04■■□□□ 1.44
SHTN1-202ENST00000355371 HRCP23327 699 aa24.01■■□□□ 1.43
SHTN1-202ENST00000355371 LOC105371045A0A1W2PR82 267 aa23.99■■□□□ 1.43
SHTN1-202ENST00000355371 ITGAEP38570 1179 aa23.86■■□□□ 1.41
SHTN1-202ENST00000355371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.85■■□□□ 1.41
SHTN1-202ENST00000355371 HNRNPUL2Q1KMD3 747 aaKnown RBP23.85■■□□□ 1.41
SHTN1-202ENST00000355371 ABCC9O60706 1549 aa23.7■■□□□ 1.39
SHTN1-202ENST00000355371 MYT1LQ9UL68 1186 aa23.68■■□□□ 1.38
SHTN1-202ENST00000355371 MYT1Q01538 1121 aa23.67■■□□□ 1.38
SHTN1-202ENST00000355371 POLR3GLQ9BT43 218 aa23.57■■□□□ 1.36
SHTN1-202ENST00000355371 PABPN1Q86U42 306 aaKnown RBP eCLIP23.54■■□□□ 1.36
SHTN1-202ENST00000355371 FAM50AQ14320 339 aaKnown RBP23.39■■□□□ 1.33
SHTN1-202ENST00000355371 DAXXQ9UER7 740 aaPredicted RBP23.37■■□□□ 1.33
SHTN1-202ENST00000355371 DIEXFQ68CQ4 756 aaKnown RBP23.37■■□□□ 1.33
SHTN1-202ENST00000355371 TRIM52Q96A61 297 aa23.23■■□□□ 1.31
SHTN1-202ENST00000355371 CNGB1Q14028 1251 aaPredicted RBP23.22■■□□□ 1.31
SHTN1-202ENST00000355371 SLC4A1APQ9BWU0 796 aaKnown RBP23.12■■□□□ 1.29
SHTN1-202ENST00000355371 NEUROD1Q13562 356 aa23.11■■□□□ 1.29
SHTN1-202ENST00000355371 CSRNP3Q8WYN3 585 aa23.09■■□□□ 1.29
SHTN1-202ENST00000355371 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
SHTN1-202ENST00000355371 ANP32CO43423 234 aa22.97■■□□□ 1.27
SHTN1-202ENST00000355371 ZNF316A6NFI3 1004 aaPredicted RBP22.93■■□□□ 1.26
SHTN1-202ENST00000355371 FBLN2P98095 1184 aa22.93■■□□□ 1.26
SHTN1-202ENST00000355371 SCRIBQ14160 1630 aa22.92■■□□□ 1.26
SHTN1-202ENST00000355371 CLSPNQ9HAW4 1339 aa22.9■■□□□ 1.26
SHTN1-202ENST00000355371 ZNF326Q5BKZ1 582 aaKnown RBP22.86■■□□□ 1.25
SHTN1-202ENST00000355371 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
SHTN1-202ENST00000355371 RTL5Q5HYW3 569 aaPredicted RBP22.82■■□□□ 1.24
SHTN1-202ENST00000355371 P3H3Q8IVL6 736 aa22.81■■□□□ 1.24
SHTN1-202ENST00000355371 CDK11AQ9UQ88 783 aaPredicted RBP22.77■■□□□ 1.23
SHTN1-202ENST00000355371 GTF3C3Q9Y5Q9 886 aa22.74■■□□□ 1.23
SHTN1-202ENST00000355371 DCAF1Q9Y4B6 1507 aa22.72■■□□□ 1.23
SHTN1-202ENST00000355371 BCANQ96GW7 911 aa22.64■■□□□ 1.22
SHTN1-202ENST00000355371 ARID3CA6NKF2 412 aa22.64■■□□□ 1.21
SHTN1-202ENST00000355371 ZNF777Q9ULD5 760 aaPredicted RBP22.6■■□□□ 1.21
SHTN1-202ENST00000355371 ZBTB47Q9UFB7 747 aaPredicted RBP22.56■■□□□ 1.2
SHTN1-202ENST00000355371 ACIN1Q9UKV3 1341 aaKnown RBP22.53■■□□□ 1.2
SHTN1-202ENST00000355371 TONSLQ96HA7 1378 aa22.51■■□□□ 1.19
SHTN1-202ENST00000355371 NEFMP07197 916 aa22.51■■□□□ 1.19
SHTN1-202ENST00000355371 CANXP27824 592 aaKnown RBP22.49■■□□□ 1.19
SHTN1-202ENST00000355371 RB1CC1Q8TDY2 1594 aa22.41■■□□□ 1.18
SHTN1-202ENST00000355371 EEA1Q15075 1411 aa22.33■■□□□ 1.17
SHTN1-202ENST00000355371 CLIP1P30622 1438 aa22.31■■□□□ 1.16
SHTN1-202ENST00000355371 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
SHTN1-202ENST00000355371 NPM1P06748 294 aaKnown RBP eCLIP22.27■■□□□ 1.16
SHTN1-202ENST00000355371 ESF1Q9H501 851 aaKnown RBP22.27■■□□□ 1.16
SHTN1-202ENST00000355371 ANP32AP39687 249 aaKnown RBP22.26■■□□□ 1.15
SHTN1-202ENST00000355371 MTUS2Q5JR59 1369 aa22.26■■□□□ 1.15
SHTN1-202ENST00000355371 SLC24A1O60721 1099 aa22.25■■□□□ 1.15
SHTN1-202ENST00000355371 NACADO15069 1562 aa22.24■■□□□ 1.15
SHTN1-202ENST00000355371 DDX10Q13206 875 aaKnown RBP22.23■■□□□ 1.15
SHTN1-202ENST00000355371 CHIC2Q9UKJ5 165 aa22.21■■□□□ 1.15
SHTN1-202ENST00000355371 GOLGA3Q08378 1498 aa22.21■■□□□ 1.15
SHTN1-202ENST00000355371 TSPY4P0CV99 314 aa22.2■■□□□ 1.14
SHTN1-202ENST00000355371 TSPY10P0CW01 314 aa22.2■■□□□ 1.14
SHTN1-202ENST00000355371 CHGAP10645 457 aaKnown RBP22.19■■□□□ 1.14
SHTN1-202ENST00000355371 HNRNPUQ00839 825 aaKnown RBP eCLIP22.19■■□□□ 1.14
SHTN1-202ENST00000355371 STAG3Q9UJ98 1225 aa22.17■■□□□ 1.14
SHTN1-202ENST00000355371 FKBP8Q14318 412 aa22.16■■□□□ 1.14
SHTN1-202ENST00000355371 CHMP7Q8WUX9 453 aaPredicted RBP22.14■■□□□ 1.13
SHTN1-202ENST00000355371 FAM9BQ8IZU0 186 aa22.12■■□□□ 1.13
SHTN1-202ENST00000355371 CEP162Q5TB80 1403 aa22.12■■□□□ 1.13
SHTN1-202ENST00000355371 WRNQ14191 1432 aaPredicted RBP eCLIP22.11■■□□□ 1.13
SHTN1-202ENST00000355371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.09■■□□□ 1.139e-7■□□□□ 10.6
SHTN1-202ENST00000355371 BCL11AQ9H165 835 aa22.09■■□□□ 1.13
SHTN1-202ENST00000355371 BAZ1BQ9UIG0 1483 aaKnown RBP22.08■■□□□ 1.12
SHTN1-202ENST00000355371 TMC1Q8TDI8 760 aa22.07■■□□□ 1.12
SHTN1-202ENST00000355371 MYO15BQ96JP2 1530 aa22.03■■□□□ 1.12
SHTN1-202ENST00000355371 TNIKQ9UKE5 1360 aa22.02■■□□□ 1.12
SHTN1-202ENST00000355371 NPM2Q86SE8 214 aaKnown RBP22.02■■□□□ 1.12
SHTN1-202ENST00000355371 KIF27Q86VH2 1401 aa22.01■■□□□ 1.11
SHTN1-202ENST00000355371 CEP164Q9UPV0 1460 aa22■■□□□ 1.11
SHTN1-202ENST00000355371 GOLGA6L2Q8N9W4 650 aaPredicted RBP22■■□□□ 1.11
SHTN1-202ENST00000355371 MRS2Q9HD23 443 aa21.98■■□□□ 1.11
SHTN1-202ENST00000355371 EIF4G2P78344 907 aaKnown RBP eCLIP21.98■■□□□ 1.115e-23■■■■■ 59.6
SHTN1-202ENST00000355371 UPF2Q9HAU5 1272 aaKnown RBP21.98■■□□□ 1.11
SHTN1-202ENST00000355371 WDR43Q15061 677 aaKnown RBP eCLIP21.97■■□□□ 1.11
SHTN1-202ENST00000355371 KDM2AQ9Y2K7 1162 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms