Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 NST1YNL091W 3723 nt1.28□□□□□ -2.2
DNL4Q08387 MSN5YDR335W 3675 nt1.28□□□□□ -2.2
DNL4Q08387 snR65snR65 100 nt1.28□□□□□ -2.2
DNL4Q08387 YMR242W-AYMR242W-A 90 nt1.28□□□□□ -2.2
DNL4Q08387 YOR376WYOR376W 369 nt1.28□□□□□ -2.2
DNL4Q08387 SIP4YJL089W 2490 nt1.28□□□□□ -2.2
DNL4Q08387 ZIP2YGL249W 2115 nt1.27□□□□□ -2.21
DNL4Q08387 CLU1YMR012W 3834 nt1.27□□□□□ -2.21
DNL4Q08387 ENV11YGR071C 2583 nt1.27□□□□□ -2.21
DNL4Q08387 PIG1YLR273C 1947 nt1.27□□□□□ -2.21
DNL4Q08387 HTL1YCR020W-B 237 nt1.26□□□□□ -2.21
DNL4Q08387 YIL032CYIL032C 357 nt1.26□□□□□ -2.21
DNL4Q08387 YOL160WYOL160W 342 nt1.26□□□□□ -2.21
DNL4Q08387 RPL33BYOR234C 324 nt1.26□□□□□ -2.21
DNL4Q08387 SMC4YLR086W 4257 nt1.26□□□□□ -2.21
DNL4Q08387 YJR029WYJR029W 5268 nt1.25□□□□□ -2.21
DNL4Q08387 YPR137C-BYPR137C-B 5268 nt1.25□□□□□ -2.21
DNL4Q08387 YCS4YLR272C 3531 nt1.25□□□□□ -2.21
DNL4Q08387 snR60snR60 104 nt1.25□□□□□ -2.21
DNL4Q08387 SSS1YDR086C 243 nt1.25□□□□□ -2.21
DNL4Q08387 AZF1YOR113W 2745 nt1.25□□□□□ -2.21
DNL4Q08387 SEC5YDR166C 2916 nt1.25□□□□□ -2.21
DNL4Q08387 YPR063CYPR063C 423 nt1.24□□□□□ -2.21
DNL4Q08387 DOP1YDR141C 5097 nt1.24□□□□□ -2.21
DNL4Q08387 ROM2YLR371W 4071 nt1.24□□□□□ -2.21
DNL4Q08387 NUT1YGL151W 3399 nt1.24□□□□□ -2.21
DNL4Q08387 RAD50YNL250W 3939 nt1.23□□□□□ -2.21
DNL4Q08387 YAR009CYAR009C 3591 nt1.23□□□□□ -2.21
DNL4Q08387 YBL008W-AYBL008W-A 240 nt1.23□□□□□ -2.21
DNL4Q08387 YMR175W-AYMR175W-A 195 nt1.23□□□□□ -2.21
DNL4Q08387 SLX4YLR135W 2247 nt1.23□□□□□ -2.21
DNL4Q08387 MPT5YGL178W 2580 nt1.22□□□□□ -2.21
DNL4Q08387 SCC2YDR180W 4482 nt1.22□□□□□ -2.21
DNL4Q08387 SPT21YMR179W 2277 nt1.22□□□□□ -2.21
DNL4Q08387 YCR022CYCR022C 345 nt1.22□□□□□ -2.21
DNL4Q08387 YDL211CYDL211C 1119 nt1.22□□□□□ -2.21
DNL4Q08387 YDR344CYDR344C 444 nt1.22□□□□□ -2.21
DNL4Q08387 YGL217CYGL217C 342 nt1.22□□□□□ -2.21
DNL4Q08387 YGR069WYGR069W 336 nt1.22□□□□□ -2.21
DNL4Q08387 YIL115W-AYIL115W-A 372 nt1.22□□□□□ -2.21
DNL4Q08387 RRT15YLR162W-A 189 nt1.22□□□□□ -2.21
DNL4Q08387 YMR290W-AYMR290W-A 348 nt1.22□□□□□ -2.21
DNL4Q08387 YOR161W-BYOR161W-B 261 nt1.22□□□□□ -2.21
DNL4Q08387 NIP100YPL174C 2607 nt1.21□□□□□ -2.22
DNL4Q08387 YOR108C-AYOR108C-A 210 nt1.21□□□□□ -2.22
DNL4Q08387 MDS3YGL197W 4464 nt1.21□□□□□ -2.22
DNL4Q08387 OST1YJL002C 1431 nt1.21□□□□□ -2.22
DNL4Q08387 RAD34YDR314C 2079 nt1.2□□□□□ -2.22
DNL4Q08387 YLL054CYLL054C 2532 nt1.2□□□□□ -2.22
DNL4Q08387 BUD3YCL014W 4911 nt1.2□□□□□ -2.22
DNL4Q08387 VPS54YDR027C 2670 nt1.2□□□□□ -2.22
DNL4Q08387 VAM6YDL077C 3150 nt1.2□□□□□ -2.22
DNL4Q08387 RPL34BYIL052C 366 nt1.2□□□□□ -2.22
DNL4Q08387 INA22YIR024C 651 nt1.2□□□□□ -2.22
DNL4Q08387 YOR282WYOR282W 321 nt1.2□□□□□ -2.22
DNL4Q08387 YCK3YER123W 1575 nt1.2□□□□□ -2.22
DNL4Q08387 NOC3YLR002C 1992 nt1.19□□□□□ -2.22
DNL4Q08387 SCW11YGL028C 1629 nt1.19□□□□□ -2.22
DNL4Q08387 YHL042WYHL042W 453 nt1.19□□□□□ -2.22
DNL4Q08387 RAD61YDR014W 1944 nt1.19□□□□□ -2.22
DNL4Q08387 ALG13YGL047W 609 nt1.18□□□□□ -2.22
DNL4Q08387 snR14snR14 160 nt1.18□□□□□ -2.22
DNL4Q08387 LCD1YDR499W 2244 nt1.17□□□□□ -2.22
DNL4Q08387 NUP188YML103C 4968 nt1.17□□□□□ -2.22
DNL4Q08387 SPT7YBR081C 3999 nt1.17□□□□□ -2.22
DNL4Q08387 APL1YJR005W 2103 nt1.17□□□□□ -2.22
DNL4Q08387 COG8YML071C 1824 nt1.17□□□□□ -2.22
DNL4Q08387 VIK1YPL253C 1944 nt1.17□□□□□ -2.22
DNL4Q08387 UBP3YER151C 2739 nt1.16□□□□□ -2.22
DNL4Q08387 NUP145YGL092W 3954 nt1.15□□□□□ -2.22
DNL4Q08387 CSE2YNR010W 450 nt1.15□□□□□ -2.23
DNL4Q08387 RPS30BYOR182C 192 nt1.15□□□□□ -2.23
DNL4Q08387 SLI15YBR156C 2097 nt1.15□□□□□ -2.23
DNL4Q08387 SWI4YER111C 3282 nt1.15□□□□□ -2.23
DNL4Q08387 SEC3YER008C 4011 nt1.15□□□□□ -2.23
DNL4Q08387 PKH2YOL100W 3246 nt1.14□□□□□ -2.23
DNL4Q08387 YPL152W-AYPL152W-A 99 nt1.14□□□□□ -2.23
DNL4Q08387 YLL020CYLL020C 306 nt1.13□□□□□ -2.23
DNL4Q08387 YNL028WYNL028W 318 nt1.13□□□□□ -2.23
DNL4Q08387 YLL007CYLL007C 1998 nt1.13□□□□□ -2.23
DNL4Q08387 CUL3YGR003W 2235 nt1.13□□□□□ -2.23
DNL4Q08387 YEL020C-BYEL020C-B 198 nt1.12□□□□□ -2.23
DNL4Q08387 APL3YBL037W 3078 nt1.11□□□□□ -2.23
DNL4Q08387 SPO21YOL091W 1830 nt1.11□□□□□ -2.23
DNL4Q08387 HMRA2YCR096C 360 nt1.11□□□□□ -2.23
DNL4Q08387 YHR063W-AYHR063W-A 336 nt1.11□□□□□ -2.23
DNL4Q08387 YOR008C-AYOR008C-A 225 nt1.11□□□□□ -2.23
DNL4Q08387 YOR015WYOR015W 360 nt1.11□□□□□ -2.23
DNL4Q08387 SLD3YGL113W 2007 nt1.11□□□□□ -2.23
DNL4Q08387 ALY2YJL084C 3141 nt1.11□□□□□ -2.23
DNL4Q08387 YDR366CYDR366C 399 nt1.1□□□□□ -2.23
DNL4Q08387 PAU12YGR294W 363 nt1.1□□□□□ -2.23
DNL4Q08387 YIR044CYIR044C 186 nt1.1□□□□□ -2.23
DNL4Q08387 RPS25BYLR333C 327 nt1.1□□□□□ -2.23
DNL4Q08387 YBR064WYBR064W 429 nt1.1□□□□□ -2.23
DNL4Q08387 PAU24YBR301W 363 nt1.1□□□□□ -2.23
DNL4Q08387 PDE2YOR360C 1581 nt1.09□□□□□ -2.23
DNL4Q08387 snR8snR8 190 nt1.09□□□□□ -2.23
DNL4Q08387 RPS27BYHR021C 249 nt1.09□□□□□ -2.23
DNL4Q08387 PAM16YJL104W 450 nt1.09□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms