RNA–Protein interactions for RNA: snR65

snR65, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR65, Length 100 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR65snR65 MTC1P47018 478 aaKnown RBP12.71□□□□□ -0.37
snR65snR65 FAP1P53971 965 aa12□□□□□ -0.49
snR65snR65 DRS1P32892 752 aaKnown RBP11.47□□□□□ -0.57
snR65snR65 PRY3P47033 881 aa11.29□□□□□ -0.6
snR65snR65 PRI1P10363 409 aa10.97□□□□□ -0.65
snR65snR65 AAD16Q02895 342 aa10.97□□□□□ -0.65
snR65snR65 ISW2Q08773 1120 aa10.65□□□□□ -0.7
snR65snR65 YCK3P39962 524 aa10.61□□□□□ -0.71
snR65snR65 RPG1P38249 964 aaKnown RBP10.57□□□□□ -0.72
snR65snR65 HAA1Q12753 694 aaKnown RBP10.53□□□□□ -0.72
snR65snR65 TSR3Q12094 313 aaKnown RBP10.38□□□□□ -0.75
snR65snR65 DIP2Q12220 943 aaPredicted RBP10.21□□□□□ -0.77
snR65snR65 RSE1Q04693 1361 aaKnown RBP9.98□□□□□ -0.81
snR65snR65 MRPL32P25348 183 aa9.96□□□□□ -0.82
snR65snR65 RPL17AP05740 184 aaKnown RBP9.71□□□□□ -0.86
snR65snR65 REB1P21538 810 aa9.71□□□□□ -0.86
snR65snR65 RPL17BP46990 184 aaKnown RBP9.71□□□□□ -0.86
snR65snR65 AVT3P36062 692 aa9.69□□□□□ -0.86
snR65snR65 YGL015CP33199 130 aa9.66□□□□□ -0.86
snR65snR65 CDC27P38042 758 aa9.38□□□□□ -0.91
snR65snR65 BFR2Q06631 534 aaKnown RBP9.31□□□□□ -0.92
snR65snR65 YKR023WP36119 530 aaKnown RBP9.25□□□□□ -0.93
snR65snR65 SPT21P35209 758 aa9.22□□□□□ -0.93
snR65snR65 MAP2P38174 421 aaKnown RBP9.15□□□□□ -0.94
snR65snR65 UBP10P53874 792 aaPredicted RBP9.13□□□□□ -0.95
snR65snR65 HOP09932 586 aa9.09□□□□□ -0.95
snR65snR65 DCD1P06773 312 aa9.07□□□□□ -0.96
snR65snR65 TFC8Q12308 588 aa9.05□□□□□ -0.96
snR65snR65 BUD31P25337 157 aaPredicted RBP9.03□□□□□ -0.96
snR65snR65 SCY1P53009 804 aa8.88□□□□□ -0.99
snR65snR65 RIM101P33400 625 aa8.81□□□□□ -1
snR65snR65 SLX5P32828 619 aaKnown RBP8.78□□□□□ -1
snR65snR65 TIF4632P39936 914 aaKnown RBP8.78□□□□□ -1
snR65snR65 BCH2P36122 765 aa8.75□□□□□ -1.01
snR65snR65 TGL3P40308 642 aa8.74□□□□□ -1.01
snR65snR65 UBP9P39967 754 aa8.62□□□□□ -1.03
snR65snR65 SIS1P25294 352 aaKnown RBP8.59□□□□□ -1.03
snR65snR65 OXP1P28273 1286 aa8.52□□□□□ -1.05
snR65snR65 EPS1P40557 701 aa8.49□□□□□ -1.05
snR65snR65 BDF1P35817 686 aa8.47□□□□□ -1.05
snR65snR65 PTP3P40048 928 aa8.43□□□□□ -1.06
snR65snR65 YIL055CP40523 627 aaKnown RBP8.41□□□□□ -1.06
snR65snR65 MST1P07236 462 aa8.31□□□□□ -1.08
snR65snR65 YOR238WQ08634 303 aa8.29□□□□□ -1.08
snR65snR65 YBL029C-AQ3E756 94 aa8.29□□□□□ -1.08
snR65snR65 RSM7P47150 247 aa8.27□□□□□ -1.09
snR65snR65 BBC1P47068 1157 aa8.26□□□□□ -1.09
snR65snR65 YAH1Q12184 172 aaKnown RBP8.24□□□□□ -1.09
snR65snR65 AI2P03876 854 aa8.23□□□□□ -1.09
snR65snR65 NSR1P27476 414 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
snR65snR65 YAP5P40574 245 aa8.17□□□□□ -1.1
snR65snR65 VNX1P42839 908 aa8.17□□□□□ -1.1
snR65snR65 WSC3Q12215 556 aa8.12□□□□□ -1.11
snR65snR65 SPP1Q03012 353 aa8.11□□□□□ -1.11
snR65snR65 YLR271WQ06152 274 aa8.05□□□□□ -1.12
snR65snR65 GTT3P39996 337 aa8.01□□□□□ -1.13
snR65snR65 TFA1P36100 482 aa7.99□□□□□ -1.13
snR65snR65 TIF11P38912 153 aaKnown RBP7.98□□□□□ -1.13
snR65snR65 PSD2P53037 1138 aaKnown RBP7.97□□□□□ -1.13
snR65snR65 PIB1Q06651 286 aa7.97□□□□□ -1.13
snR65snR65 AIR2Q12476 344 aaKnown RBP7.94□□□□□ -1.14
snR65snR65 MRM1P25270 412 aa7.93□□□□□ -1.14
snR65snR65 YJL171CP46992 396 aa7.92□□□□□ -1.14
snR65snR65 FKH1P40466 484 aa7.91□□□□□ -1.14
snR65snR65 ULI1P43604 169 aa7.88□□□□□ -1.15
snR65snR65 LDB19Q12502 818 aa7.88□□□□□ -1.15
snR65snR65 IOC2Q12072 812 aa7.84□□□□□ -1.15
snR65snR65 SSP1P38871 571 aa7.83□□□□□ -1.16
snR65snR65 ARP8Q12386 881 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
snR65snR65 BMT6Q12291 365 aa7.77□□□□□ -1.17
snR65snR65 SET4P42948 560 aa7.76□□□□□ -1.17
snR65snR65 CST9Q06032 482 aa7.76□□□□□ -1.17
snR65snR65 MSB4Q12317 492 aa7.76□□□□□ -1.17
snR65snR65 YMR1P47147 688 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
snR65snR65 DBP1P24784 617 aaKnown RBP7.74□□□□□ -1.17
snR65snR65 EAP1P36041 632 aaKnown RBP7.74□□□□□ -1.17
snR65snR65 YOL036WQ08206 761 aa7.74□□□□□ -1.17
snR65snR65 VPS29P38759 282 aa7.73□□□□□ -1.17
snR65snR65 YFR006WP43590 535 aa7.73□□□□□ -1.17
snR65snR65 RTG3P38165 486 aa7.71□□□□□ -1.18
snR65snR65 TRP5P00931 707 aaKnown RBP7.7□□□□□ -1.18
snR65snR65 RTG1P32607 177 aa7.7□□□□□ -1.18
snR65snR65 MGA2P40578 1113 aa7.69□□□□□ -1.18
snR65snR65 STS1P38637 319 aa7.68□□□□□ -1.18
snR65snR65 VMA1P17255 1071 aaKnown RBP7.67□□□□□ -1.18
snR65snR65 NCR1Q12200 1170 aa7.66□□□□□ -1.18
snR65snR65 YNL035CP53962 389 aaKnown RBP7.63□□□□□ -1.19
snR65snR65 RCR1P38212 213 aa7.62□□□□□ -1.19
snR65snR65 SAM3Q08986 587 aa7.61□□□□□ -1.19
snR65snR65 SEC61P32915 480 aa7.59□□□□□ -1.19
snR65snR65 TFG1P41895 735 aaPredicted RBP7.54□□□□□ -1.2
snR65snR65 GYP5Q12344 894 aa7.52□□□□□ -1.21
snR65snR65 SAP30P38429 201 aa7.5□□□□□ -1.21
snR65snR65 DAN4P47179 1161 aa7.5□□□□□ -1.21
snR65snR65 DCW1P36091 449 aa7.48□□□□□ -1.21
snR65snR65 JIP4Q03361 876 aa7.48□□□□□ -1.21
snR65snR65 HTA1P04911 132 aaKnown RBP7.46□□□□□ -1.22
snR65snR65 HTA2P04912 132 aa7.46□□□□□ -1.22
snR65snR65 ABP1P15891 592 aaKnown RBP7.46□□□□□ -1.22
snR65snR65 YEL023CP39992 682 aa7.43□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms