RNA–Protein interactions for RNA: YGL197W

MDS3, Transcript of Putative component of the TOR regulatory pathway, yeastyeast

Gene MDS3, Length 4,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDS3YGL197W MTC1P47018 478 aaKnown RBP5.23□□□□□ -1.57
MDS3YGL197W DRS1P32892 752 aaKnown RBP4.83□□□□□ -1.64
MDS3YGL197W FAP1P53971 965 aa4.6□□□□□ -1.67
MDS3YGL197W ISW2Q08773 1120 aa4.46□□□□□ -1.7
MDS3YGL197W AAD16Q02895 342 aa4.41□□□□□ -1.7
MDS3YGL197W PRI1P10363 409 aa4.4□□□□□ -1.71
MDS3YGL197W PRY3P47033 881 aa4.29□□□□□ -1.72
MDS3YGL197W HAA1Q12753 694 aaKnown RBP4.27□□□□□ -1.73
MDS3YGL197W DIP2Q12220 943 aaPredicted RBP4.25□□□□□ -1.73
MDS3YGL197W RPG1P38249 964 aaKnown RBP4.23□□□□□ -1.73
MDS3YGL197W RSE1Q04693 1361 aaKnown RBP4.22□□□□□ -1.73
MDS3YGL197W AVT3P36062 692 aa4.11□□□□□ -1.75
MDS3YGL197W MRPL32P25348 183 aa4.08□□□□□ -1.76
MDS3YGL197W BFR2Q06631 534 aaKnown RBP4.07□□□□□ -1.76
MDS3YGL197W REB1P21538 810 aa4.03□□□□□ -1.76
MDS3YGL197W TSR3Q12094 313 aaKnown RBP4.02□□□□□ -1.77
MDS3YGL197W RPL17AP05740 184 aaKnown RBP3.97□□□□□ -1.77
MDS3YGL197W YGL015CP33199 130 aa3.97□□□□□ -1.77
MDS3YGL197W RPL17BP46990 184 aaKnown RBP3.97□□□□□ -1.77
MDS3YGL197W TFA1P36100 482 aa3.93□□□□□ -1.78
MDS3YGL197W YCK3P39962 524 aa3.89□□□□□ -1.79
MDS3YGL197W UBP10P53874 792 aaPredicted RBP3.86□□□□□ -1.79
MDS3YGL197W SPT21P35209 758 aa3.8□□□□□ -1.8
MDS3YGL197W TIF4632P39936 914 aaKnown RBP3.74□□□□□ -1.81
MDS3YGL197W RIM101P33400 625 aa3.73□□□□□ -1.81
MDS3YGL197W TGL3P40308 642 aa3.7□□□□□ -1.82
MDS3YGL197W YKR023WP36119 530 aaKnown RBP3.7□□□□□ -1.82
MDS3YGL197W TFC8Q12308 588 aa3.68□□□□□ -1.82
MDS3YGL197W UBP9P39967 754 aa3.66□□□□□ -1.82
MDS3YGL197W CDC27P38042 758 aa3.65□□□□□ -1.83
MDS3YGL197W SLX5P32828 619 aaKnown RBP3.63□□□□□ -1.83
MDS3YGL197W NSR1P27476 414 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
MDS3YGL197W YIL055CP40523 627 aaKnown RBP3.6□□□□□ -1.83
MDS3YGL197W BBC1P47068 1157 aa3.59□□□□□ -1.83
MDS3YGL197W MAP2P38174 421 aaKnown RBP3.59□□□□□ -1.84
MDS3YGL197W BUD31P25337 157 aaPredicted RBP3.58□□□□□ -1.84
MDS3YGL197W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
MDS3YGL197W HOP09932 586 aa3.54□□□□□ -1.84
MDS3YGL197W SCY1P53009 804 aa3.54□□□□□ -1.84
MDS3YGL197W RSM7P47150 247 aa3.52□□□□□ -1.85
MDS3YGL197W PTP3P40048 928 aa3.52□□□□□ -1.85
MDS3YGL197W MST1P07236 462 aa3.5□□□□□ -1.85
MDS3YGL197W YOR238WQ08634 303 aa3.5□□□□□ -1.85
MDS3YGL197W BCH2P36122 765 aa3.5□□□□□ -1.85
MDS3YGL197W YAP5P40574 245 aa3.49□□□□□ -1.85
MDS3YGL197W EPS1P40557 701 aa3.48□□□□□ -1.85
MDS3YGL197W OXP1P28273 1286 aa3.46□□□□□ -1.86
MDS3YGL197W ABP1P15891 592 aaKnown RBP3.46□□□□□ -1.86
MDS3YGL197W EAP1P36041 632 aaKnown RBP3.44□□□□□ -1.86
MDS3YGL197W AI2P03876 854 aa3.44□□□□□ -1.86
MDS3YGL197W BDF1P35817 686 aa3.43□□□□□ -1.86
MDS3YGL197W MSB4Q12317 492 aa3.43□□□□□ -1.86
MDS3YGL197W SIS1P25294 352 aaKnown RBP3.42□□□□□ -1.86
MDS3YGL197W GTT3P39996 337 aa3.42□□□□□ -1.86
MDS3YGL197W SSP1P38871 571 aa3.42□□□□□ -1.86
MDS3YGL197W DCD1P06773 312 aa3.41□□□□□ -1.86
MDS3YGL197W MGA2P40578 1113 aa3.38□□□□□ -1.87
MDS3YGL197W NOP53Q12080 455 aaKnown RBP3.37□□□□□ -1.87
MDS3YGL197W PSD2P53037 1138 aaKnown RBP3.36□□□□□ -1.87
MDS3YGL197W TIF11P38912 153 aaKnown RBP3.36□□□□□ -1.87
MDS3YGL197W YMR1P47147 688 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
MDS3YGL197W RTG3P38165 486 aa3.34□□□□□ -1.87
MDS3YGL197W YAH1Q12184 172 aaKnown RBP3.34□□□□□ -1.87
MDS3YGL197W SPP1Q03012 353 aa3.34□□□□□ -1.88
MDS3YGL197W VNX1P42839 908 aa3.33□□□□□ -1.88
MDS3YGL197W YLR271WQ06152 274 aa3.33□□□□□ -1.88
MDS3YGL197W YJL171CP46992 396 aa3.32□□□□□ -1.88
MDS3YGL197W TFG1P41895 735 aaPredicted RBP3.32□□□□□ -1.88
MDS3YGL197W JIP4Q03361 876 aa3.32□□□□□ -1.88
MDS3YGL197W SAM3Q08986 587 aa3.31□□□□□ -1.88
MDS3YGL197W SEC61P32915 480 aa3.31□□□□□ -1.88
MDS3YGL197W FKH1P40466 484 aa3.29□□□□□ -1.88
MDS3YGL197W YNL035CP53962 389 aaKnown RBP3.28□□□□□ -1.88
MDS3YGL197W BMT6Q12291 365 aa3.27□□□□□ -1.89
MDS3YGL197W ULI1P43604 169 aa3.27□□□□□ -1.89
MDS3YGL197W MRM1P25270 412 aa3.26□□□□□ -1.89
MDS3YGL197W YBL029C-AQ3E756 94 aa3.25□□□□□ -1.89
MDS3YGL197W IFH1P39520 1085 aa3.25□□□□□ -1.89
MDS3YGL197W HTA1P04911 132 aaKnown RBP3.24□□□□□ -1.89
MDS3YGL197W HTA2P04912 132 aa3.24□□□□□ -1.89
MDS3YGL197W YOL036WQ08206 761 aa3.24□□□□□ -1.89
MDS3YGL197W IOC2Q12072 812 aa3.23□□□□□ -1.89
MDS3YGL197W MAK11P20484 414 aaKnown RBP3.23□□□□□ -1.89
MDS3YGL197W VMA1P17255 1071 aaKnown RBP3.23□□□□□ -1.89
MDS3YGL197W WSC3Q12215 556 aa3.23□□□□□ -1.89
MDS3YGL197W AIR2Q12476 344 aaKnown RBP3.23□□□□□ -1.89
MDS3YGL197W NCR1Q12200 1170 aa3.22□□□□□ -1.89
MDS3YGL197W RPP1BP10622 106 aaKnown RBP3.22□□□□□ -1.89
MDS3YGL197W GYP5Q12344 894 aa3.21□□□□□ -1.89
MDS3YGL197W RTG1P32607 177 aa3.21□□□□□ -1.9
MDS3YGL197W DBP1P24784 617 aaKnown RBP3.21□□□□□ -1.9
MDS3YGL197W VPS29P38759 282 aa3.21□□□□□ -1.9
MDS3YGL197W LDB19Q12502 818 aa3.21□□□□□ -1.9
MDS3YGL197W GRE2Q12068 342 aaKnown RBP3.2□□□□□ -1.9
MDS3YGL197W PTC4P38089 393 aa3.2□□□□□ -1.9
MDS3YGL197W GUT1P32190 709 aa3.19□□□□□ -1.9
MDS3YGL197W CHL1P22516 861 aaPredicted RBP3.19□□□□□ -1.9
MDS3YGL197W YDL129WQ07555 291 aa3.19□□□□□ -1.9
MDS3YGL197W TRP5P00931 707 aaKnown RBP3.18□□□□□ -1.9
MDS3YGL197W ATH1P48016 1211 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms