RNA–Protein interactions for RNA: YCL014W

BUD3, Transcript of Protein involved in bud-site selection, yeastyeast

Gene BUD3, Length 4,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD3YCL014W TY1B-DR4Q07793 1604 aa2.52□□□□□ -2.01
BUD3YCL014W MON2P48563 1636 aaPredicted RBP2.47□□□□□ -2.01
BUD3YCL014W FAP1P53971 965 aa2.43□□□□□ -2.02
BUD3YCL014W DRS1P32892 752 aaKnown RBP2.35□□□□□ -2.03
BUD3YCL014W TY1B-BRQ12193 1756 aa2.25□□□□□ -2.05
BUD3YCL014W TY1B-GR3Q12316 1755 aa2.25□□□□□ -2.05
BUD3YCL014W TY1B-ORQ92393 1755 aa2.25□□□□□ -2.05
BUD3YCL014W PRY3P47033 881 aa2.25□□□□□ -2.05
BUD3YCL014W TY1B-HO13535 1793 aa2.21□□□□□ -2.06
BUD3YCL014W TY1B-DR5P0C2I2 1755 aa2.21□□□□□ -2.06
BUD3YCL014W TY1B-DR6P0C2I3 1755 aa2.21□□□□□ -2.06
BUD3YCL014W TY1B-LR2P0C2I5 1755 aa2.21□□□□□ -2.06
BUD3YCL014W TY1B-LR3P0C2I6 1755 aaKnown RBP2.21□□□□□ -2.06
BUD3YCL014W TY1B-PR1P0C2I9 1755 aaKnown RBP2.21□□□□□ -2.06
BUD3YCL014W TY1B-PR2P0C2J0 1756 aa2.21□□□□□ -2.06
BUD3YCL014W TY1B-PR3P0C2J1 1755 aaKnown RBP2.21□□□□□ -2.06
BUD3YCL014W TY1B-JR1P47098 1755 aa2.21□□□□□ -2.06
BUD3YCL014W TY1B-ML2Q03434 1755 aaKnown RBP2.21□□□□□ -2.06
BUD3YCL014W TY1B-ER1Q03612 1755 aa2.21□□□□□ -2.06
BUD3YCL014W TY1B-ML1Q04711 1755 aaKnown RBP2.21□□□□□ -2.06
BUD3YCL014W TY1B-GR2Q12269 1755 aa2.21□□□□□ -2.06
BUD3YCL014W TY1B-OLQ12273 1755 aa2.21□□□□□ -2.06
BUD3YCL014W TY1B-PLQ12414 1755 aaKnown RBP2.21□□□□□ -2.06
BUD3YCL014W TY1B-DR3Q99231 1755 aa2.2□□□□□ -2.06
BUD3YCL014W TY2B-LR1P0C2J3 1770 aa2.19□□□□□ -2.06
BUD3YCL014W TY2B-FP0CX63 1770 aa2.19□□□□□ -2.06
BUD3YCL014W TY2B-GR2P0CX64 1770 aa2.19□□□□□ -2.06
BUD3YCL014W TY2B-CP25384 1770 aa2.19□□□□□ -2.06
BUD3YCL014W TY2B-DR2Q03494 1770 aa2.19□□□□□ -2.06
BUD3YCL014W TY1B-DR1Q03855 1755 aa2.19□□□□□ -2.06
BUD3YCL014W TY2B-DR3Q07791 1770 aaKnown RBP2.19□□□□□ -2.06
BUD3YCL014W TY2B-OR1Q12113 1770 aa2.19□□□□□ -2.06
BUD3YCL014W TY2B-DR1Q12472 1770 aa2.19□□□□□ -2.06
BUD3YCL014W TY2B-OR2Q12501 1770 aa2.19□□□□□ -2.06
BUD3YCL014W MTC1P47018 478 aaKnown RBP2.19□□□□□ -2.06
BUD3YCL014W PEP1P32319 1579 aa2.16□□□□□ -2.06
BUD3YCL014W TY2B-BQ12491 1770 aa2.16□□□□□ -2.06
BUD3YCL014W SSK2P53599 1579 aa2.11□□□□□ -2.07
BUD3YCL014W TY1B-JR2P47100 1755 aaKnown RBP2.09□□□□□ -2.07
BUD3YCL014W TY1B-ER2Q03619 1755 aa2.09□□□□□ -2.07
BUD3YCL014W TY1B-MR1Q04214 1755 aa2.09□□□□□ -2.07
BUD3YCL014W TY1B-MR2Q04670 1755 aaKnown RBP2.09□□□□□ -2.07
BUD3YCL014W TY1B-LR1Q12088 1755 aaKnown RBP2.09□□□□□ -2.07
BUD3YCL014W TY1B-NL1Q12112 1755 aa2.09□□□□□ -2.07
BUD3YCL014W TY1B-GR1Q12141 1755 aa2.09□□□□□ -2.07
BUD3YCL014W TY1B-BLQ12490 1755 aa2.09□□□□□ -2.07
BUD3YCL014W TSR3Q12094 313 aaKnown RBP2.05□□□□□ -2.08
BUD3YCL014W DCD1P06773 312 aa2.03□□□□□ -2.08
BUD3YCL014W SPT21P35209 758 aa2.02□□□□□ -2.09
BUD3YCL014W SIN3P22579 1536 aa2.01□□□□□ -2.09
BUD3YCL014W YRF1-1P0CX20 1796 aa2.01□□□□□ -2.09
BUD3YCL014W YRF1-5P0CX21 1796 aa2.01□□□□□ -2.09
BUD3YCL014W YRF1-8P0CX22 1796 aa2.01□□□□□ -2.09
BUD3YCL014W ATG2P53855 1592 aa2.01□□□□□ -2.09
BUD3YCL014W BNI1P41832 1953 aa2□□□□□ -2.09
BUD3YCL014W RPO21P04050 1733 aaKnown RBP1.99□□□□□ -2.09
BUD3YCL014W SWR1Q05471 1514 aa1.98□□□□□ -2.09
BUD3YCL014W BFR2Q06631 534 aaKnown RBP1.96□□□□□ -2.09
BUD3YCL014W RPA190P10964 1664 aaKnown RBP1.96□□□□□ -2.1
BUD3YCL014W TFA1P36100 482 aa1.95□□□□□ -2.1
BUD3YCL014W RPG1P38249 964 aaKnown RBP1.95□□□□□ -2.1
BUD3YCL014W HAA1Q12753 694 aaKnown RBP1.95□□□□□ -2.1
BUD3YCL014W YRF1-2P40105 1681 aa1.94□□□□□ -2.1
BUD3YCL014W YAH1Q12184 172 aaKnown RBP1.94□□□□□ -2.1
BUD3YCL014W SCT1P32784 759 aa1.93□□□□□ -2.1
BUD3YCL014W NSR1P27476 414 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
BUD3YCL014W ISW2Q08773 1120 aa1.93□□□□□ -2.1
BUD3YCL014W IRC20Q06554 1556 aa1.92□□□□□ -2.1
BUD3YCL014W PTP3P40048 928 aa1.92□□□□□ -2.1
BUD3YCL014W PSH1Q12161 406 aa1.91□□□□□ -2.1
BUD3YCL014W DIP2Q12220 943 aaPredicted RBP1.91□□□□□ -2.1
BUD3YCL014W RPL17AP05740 184 aaKnown RBP1.9□□□□□ -2.11
BUD3YCL014W RPL17BP46990 184 aaKnown RBP1.9□□□□□ -2.11
BUD3YCL014W HOP09932 586 aa1.9□□□□□ -2.11
BUD3YCL014W RTT106P40161 455 aa1.9□□□□□ -2.11
BUD3YCL014W AAD16Q02895 342 aa1.88□□□□□ -2.11
BUD3YCL014W REB1P21538 810 aa1.87□□□□□ -2.11
BUD3YCL014W THO2P53552 1597 aaKnown RBP1.87□□□□□ -2.11
BUD3YCL014W PIB1Q06651 286 aa1.86□□□□□ -2.11
BUD3YCL014W URN1Q06525 465 aaKnown RBP1.86□□□□□ -2.11
BUD3YCL014W KOG1P38873 1557 aa1.84□□□□□ -2.11
BUD3YCL014W ABP1P15891 592 aaKnown RBP1.84□□□□□ -2.12
BUD3YCL014W DYN1P36022 4092 aa1.83□□□□□ -2.12
BUD3YCL014W TCB3Q03640 1545 aaKnown RBP1.82□□□□□ -2.12
BUD3YCL014W UBP10P53874 792 aaPredicted RBP1.81□□□□□ -2.12
BUD3YCL014W PRI1P10363 409 aa1.81□□□□□ -2.12
BUD3YCL014W YGL015CP33199 130 aa1.81□□□□□ -2.12
BUD3YCL014W NOP53Q12080 455 aaKnown RBP1.81□□□□□ -2.12
BUD3YCL014W NAB3P38996 802 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
BUD3YCL014W UBP9P39967 754 aa1.8□□□□□ -2.12
BUD3YCL014W ESP1Q03018 1630 aa1.8□□□□□ -2.12
BUD3YCL014W HSL1P34244 1518 aa1.79□□□□□ -2.12
BUD3YCL014W HAP1P0CE41 1502 aa1.79□□□□□ -2.12
BUD3YCL014W FKH1P40466 484 aa1.79□□□□□ -2.12
BUD3YCL014W NST1P53935 1240 aa1.78□□□□□ -2.13
BUD3YCL014W SAS10Q12136 610 aaPredicted RBP1.77□□□□□ -2.13
BUD3YCL014W HIR3P47171 1648 aa1.77□□□□□ -2.13
BUD3YCL014W YCK3P39962 524 aa1.76□□□□□ -2.13
BUD3YCL014W XRN1P22147 1528 aaKnown RBP1.76□□□□□ -2.13
BUD3YCL014W DOP1Q03921 1698 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms