RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C DRS1P32892 752 aaKnown RBP3.34□□□□□ -1.88
NUP188YML103C MTC1P47018 478 aaKnown RBP3.14□□□□□ -1.91
NUP188YML103C BFR2Q06631 534 aaKnown RBP2.91□□□□□ -1.94
NUP188YML103C TFA1P36100 482 aa2.86□□□□□ -1.95
NUP188YML103C FAP1P53971 965 aa2.85□□□□□ -1.95
NUP188YML103C DCD1P06773 312 aa2.78□□□□□ -1.96
NUP188YML103C PTP3P40048 928 aa2.77□□□□□ -1.97
NUP188YML103C RQC2Q12532 1038 aaKnown RBP2.76□□□□□ -1.97
NUP188YML103C AVT3P36062 692 aa2.73□□□□□ -1.97
NUP188YML103C DIP2Q12220 943 aaPredicted RBP2.73□□□□□ -1.97
NUP188YML103C YAH1Q12184 172 aaKnown RBP2.68□□□□□ -1.98
NUP188YML103C PRY3P47033 881 aa2.67□□□□□ -1.98
NUP188YML103C TSR3Q12094 313 aaKnown RBP2.62□□□□□ -1.99
NUP188YML103C RSE1Q04693 1361 aaKnown RBP2.6□□□□□ -1.99
NUP188YML103C ISW2Q08773 1120 aa2.58□□□□□ -2
NUP188YML103C HOP09932 586 aa2.55□□□□□ -2
NUP188YML103C RPG1P38249 964 aaKnown RBP2.54□□□□□ -2
NUP188YML103C RPL17AP05740 184 aaKnown RBP2.52□□□□□ -2.01
NUP188YML103C RPL17BP46990 184 aaKnown RBP2.52□□□□□ -2.01
NUP188YML103C PIB1Q06651 286 aa2.49□□□□□ -2.01
NUP188YML103C DMA1P38823 416 aa2.46□□□□□ -2.02
NUP188YML103C PRI1P10363 409 aa2.44□□□□□ -2.02
NUP188YML103C REB1P21538 810 aa2.43□□□□□ -2.02
NUP188YML103C AAD16Q02895 342 aa2.41□□□□□ -2.02
NUP188YML103C RIM101P33400 625 aa2.39□□□□□ -2.03
NUP188YML103C RCR1P38212 213 aa2.38□□□□□ -2.03
NUP188YML103C ARP8Q12386 881 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
NUP188YML103C TAF7Q05021 590 aa2.36□□□□□ -2.03
NUP188YML103C SPT21P35209 758 aa2.36□□□□□ -2.03
NUP188YML103C SSP1P38871 571 aa2.35□□□□□ -2.03
NUP188YML103C LEO1P38439 464 aa2.33□□□□□ -2.04
NUP188YML103C CST9Q06032 482 aa2.33□□□□□ -2.04
NUP188YML103C YCK3P39962 524 aa2.32□□□□□ -2.04
NUP188YML103C CDC27P38042 758 aa2.32□□□□□ -2.04
NUP188YML103C YIL055CP40523 627 aaKnown RBP2.3□□□□□ -2.04
NUP188YML103C YFR006WP43590 535 aa2.3□□□□□ -2.04
NUP188YML103C LEU3P08638 886 aa2.28□□□□□ -2.04
NUP188YML103C MRPL32P25348 183 aa2.28□□□□□ -2.04
NUP188YML103C MGA2P40578 1113 aa2.27□□□□□ -2.05
NUP188YML103C OXP1P28273 1286 aa2.26□□□□□ -2.05
NUP188YML103C IFH1P39520 1085 aa2.26□□□□□ -2.05
NUP188YML103C RSM7P47150 247 aa2.26□□□□□ -2.05
NUP188YML103C SAS10Q12136 610 aaPredicted RBP2.26□□□□□ -2.05
NUP188YML103C BBC1P47068 1157 aa2.23□□□□□ -2.05
NUP188YML103C SCY1P53009 804 aa2.23□□□□□ -2.05
NUP188YML103C CKB1P43639 278 aa2.23□□□□□ -2.05
NUP188YML103C RPN1P38764 993 aaKnown RBP2.22□□□□□ -2.05
NUP188YML103C YKR023WP36119 530 aaKnown RBP2.22□□□□□ -2.05
NUP188YML103C YLR271WQ06152 274 aa2.22□□□□□ -2.05
NUP188YML103C HGH1P48362 394 aaKnown RBP2.21□□□□□ -2.06
NUP188YML103C NOP53Q12080 455 aaKnown RBP2.21□□□□□ -2.06
NUP188YML103C TFC8Q12308 588 aa2.21□□□□□ -2.06
NUP188YML103C HAA1Q12753 694 aaKnown RBP2.2□□□□□ -2.06
NUP188YML103C PSD2P53037 1138 aaKnown RBP2.19□□□□□ -2.06
NUP188YML103C YPR148CQ06523 435 aa2.19□□□□□ -2.06
NUP188YML103C AI2P03876 854 aa2.19□□□□□ -2.06
NUP188YML103C MRM1P25270 412 aa2.19□□□□□ -2.06
NUP188YML103C BCH2P36122 765 aa2.17□□□□□ -2.06
NUP188YML103C MAP2P38174 421 aaKnown RBP2.17□□□□□ -2.06
NUP188YML103C UBP10P53874 792 aaPredicted RBP2.16□□□□□ -2.06
NUP188YML103C MAK21Q12176 1025 aaKnown RBP2.15□□□□□ -2.07
NUP188YML103C MAK11P20484 414 aaKnown RBP2.15□□□□□ -2.07
NUP188YML103C RTG3P38165 486 aa2.15□□□□□ -2.07
NUP188YML103C SET1P38827 1080 aaKnown RBP2.14□□□□□ -2.07
NUP188YML103C SPB4P25808 606 aaPredicted RBP2.14□□□□□ -2.07
NUP188YML103C YNR021WP53723 404 aaKnown RBP2.14□□□□□ -2.07
NUP188YML103C ITT1Q04638 464 aa2.13□□□□□ -2.07
NUP188YML103C EPS1P40557 701 aa2.13□□□□□ -2.07
NUP188YML103C DSF2P38213 736 aa2.12□□□□□ -2.07
NUP188YML103C RAM2P29703 316 aa2.12□□□□□ -2.07
NUP188YML103C AIM7Q12156 149 aa2.12□□□□□ -2.07
NUP188YML103C RLF2Q12495 606 aa2.12□□□□□ -2.07
NUP188YML103C VPS70P47161 811 aa2.11□□□□□ -2.07
NUP188YML103C NSR1P27476 414 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
NUP188YML103C YGL015CP33199 130 aa2.1□□□□□ -2.07
NUP188YML103C REF2P42073 533 aaPredicted RBP2.1□□□□□ -2.07
NUP188YML103C PBS2P08018 668 aa2.1□□□□□ -2.07
NUP188YML103C MIF2P35201 549 aa2.1□□□□□ -2.07
NUP188YML103C DMA2P53924 522 aa2.1□□□□□ -2.07
NUP188YML103C MAM3Q12296 706 aa2.1□□□□□ -2.07
NUP188YML103C YMR1P47147 688 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
NUP188YML103C WSC3Q12215 556 aa2.09□□□□□ -2.07
NUP188YML103C ABP1P15891 592 aaKnown RBP2.09□□□□□ -2.08
NUP188YML103C SLX5P32828 619 aaKnown RBP2.09□□□□□ -2.08
NUP188YML103C BDF1P35817 686 aa2.09□□□□□ -2.08
NUP188YML103C TIF4632P39936 914 aaKnown RBP2.08□□□□□ -2.08
NUP188YML103C COQ8P27697 501 aa2.08□□□□□ -2.08
NUP188YML103C RPP1BP10622 106 aaKnown RBP2.07□□□□□ -2.08
NUP188YML103C HPC2Q01448 625 aa2.07□□□□□ -2.08
NUP188YML103C KIN1P13185 1064 aa2.07□□□□□ -2.08
NUP188YML103C CLB5P30283 435 aa2.06□□□□□ -2.08
NUP188YML103C YDR344CQ05510 147 aa2.06□□□□□ -2.08
NUP188YML103C COX6P00427 148 aa2.06□□□□□ -2.08
NUP188YML103C SSA2P10592 639 aaKnown RBP2.06□□□□□ -2.08
NUP188YML103C KIC1P38692 1080 aa2.06□□□□□ -2.08
NUP188YML103C TGL3P40308 642 aa2.06□□□□□ -2.08
NUP188YML103C YAP5P40574 245 aa2.06□□□□□ -2.08
NUP188YML103C VPS29P38759 282 aa2.05□□□□□ -2.08
NUP188YML103C ATF2P53296 535 aa2.05□□□□□ -2.08
NUP188YML103C IES2P40154 320 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms