RNA–Protein interactions for RNA: YHR021C

RPS27B, Transcript of Protein component of the small (40S) ribosomal subunit, yeastyeast

Gene RPS27B, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPS27BYHR021C MTC1P47018 478 aaKnown RBP9.42□□□□□ -0.9
RPS27BYHR021C FAP1P53971 965 aa9.25□□□□□ -0.93
RPS27BYHR021C PRY3P47033 881 aa8.71□□□□□ -1.02
RPS27BYHR021C AAD16Q02895 342 aa8.34□□□□□ -1.07
RPS27BYHR021C PRI1P10363 409 aa8.29□□□□□ -1.08
RPS27BYHR021C DRS1P32892 752 aaKnown RBP8.17□□□□□ -1.1
RPS27BYHR021C YCK3P39962 524 aa8.14□□□□□ -1.11
RPS27BYHR021C HAA1Q12753 694 aaKnown RBP8.11□□□□□ -1.11
RPS27BYHR021C ISW2Q08773 1120 aa7.97□□□□□ -1.13
RPS27BYHR021C RPG1P38249 964 aaKnown RBP7.9□□□□□ -1.14
RPS27BYHR021C TSR3Q12094 313 aaKnown RBP7.82□□□□□ -1.16
RPS27BYHR021C MRPL32P25348 183 aa7.54□□□□□ -1.2
RPS27BYHR021C YGL015CP33199 130 aa7.39□□□□□ -1.23
RPS27BYHR021C DIP2Q12220 943 aaPredicted RBP7.39□□□□□ -1.23
RPS27BYHR021C RSE1Q04693 1361 aaKnown RBP7.33□□□□□ -1.24
RPS27BYHR021C REB1P21538 810 aa7.18□□□□□ -1.26
RPS27BYHR021C RPL17AP05740 184 aaKnown RBP7.14□□□□□ -1.27
RPS27BYHR021C RPL17BP46990 184 aaKnown RBP7.14□□□□□ -1.27
RPS27BYHR021C BUD31P25337 157 aaPredicted RBP7.04□□□□□ -1.28
RPS27BYHR021C CDC27P38042 758 aa7.01□□□□□ -1.29
RPS27BYHR021C AVT3P36062 692 aa6.9□□□□□ -1.3
RPS27BYHR021C UBP10P53874 792 aaPredicted RBP6.9□□□□□ -1.3
RPS27BYHR021C MAP2P38174 421 aaKnown RBP6.88□□□□□ -1.31
RPS27BYHR021C YKR023WP36119 530 aaKnown RBP6.83□□□□□ -1.32
RPS27BYHR021C SPT21P35209 758 aa6.74□□□□□ -1.33
RPS27BYHR021C HOP09932 586 aa6.71□□□□□ -1.34
RPS27BYHR021C DCD1P06773 312 aa6.7□□□□□ -1.34
RPS27BYHR021C TFC8Q12308 588 aa6.69□□□□□ -1.34
RPS27BYHR021C SIS1P25294 352 aaKnown RBP6.68□□□□□ -1.34
RPS27BYHR021C TIF4632P39936 914 aaKnown RBP6.65□□□□□ -1.34
RPS27BYHR021C UBP9P39967 754 aa6.63□□□□□ -1.35
RPS27BYHR021C SCY1P53009 804 aa6.63□□□□□ -1.35
RPS27BYHR021C TGL3P40308 642 aa6.6□□□□□ -1.35
RPS27BYHR021C SLX5P32828 619 aaKnown RBP6.59□□□□□ -1.35
RPS27BYHR021C BFR2Q06631 534 aaKnown RBP6.48□□□□□ -1.37
RPS27BYHR021C BCH2P36122 765 aa6.45□□□□□ -1.38
RPS27BYHR021C RIM101P33400 625 aa6.37□□□□□ -1.39
RPS27BYHR021C YBL029C-AQ3E756 94 aa6.26□□□□□ -1.41
RPS27BYHR021C EPS1P40557 701 aa6.25□□□□□ -1.41
RPS27BYHR021C BDF1P35817 686 aa6.24□□□□□ -1.41
RPS27BYHR021C MST1P07236 462 aa6.23□□□□□ -1.41
RPS27BYHR021C YOR238WQ08634 303 aa6.21□□□□□ -1.42
RPS27BYHR021C VNX1P42839 908 aa6.16□□□□□ -1.42
RPS27BYHR021C OXP1P28273 1286 aa6.14□□□□□ -1.43
RPS27BYHR021C PTP3P40048 928 aa6.12□□□□□ -1.43
RPS27BYHR021C SPP1Q03012 353 aa6.11□□□□□ -1.43
RPS27BYHR021C NSR1P27476 414 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
RPS27BYHR021C YIL055CP40523 627 aaKnown RBP6.1□□□□□ -1.43
RPS27BYHR021C WSC3Q12215 556 aa6.09□□□□□ -1.43
RPS27BYHR021C YAP5P40574 245 aa6.08□□□□□ -1.44
RPS27BYHR021C YJL171CP46992 396 aa6.05□□□□□ -1.44
RPS27BYHR021C BBC1P47068 1157 aa6.05□□□□□ -1.44
RPS27BYHR021C AIR2Q12476 344 aaKnown RBP6.03□□□□□ -1.44
RPS27BYHR021C TIF11P38912 153 aaKnown RBP6□□□□□ -1.45
RPS27BYHR021C FKH1P40466 484 aa6□□□□□ -1.45
RPS27BYHR021C GTT3P39996 337 aa5.99□□□□□ -1.45
RPS27BYHR021C AI2P03876 854 aa5.98□□□□□ -1.45
RPS27BYHR021C RSM7P47150 247 aa5.98□□□□□ -1.45
RPS27BYHR021C LDB19Q12502 818 aa5.92□□□□□ -1.46
RPS27BYHR021C ULI1P43604 169 aa5.91□□□□□ -1.46
RPS27BYHR021C YAH1Q12184 172 aaKnown RBP5.91□□□□□ -1.46
RPS27BYHR021C BMT6Q12291 365 aa5.9□□□□□ -1.46
RPS27BYHR021C IOC2Q12072 812 aa5.87□□□□□ -1.47
RPS27BYHR021C PIB1Q06651 286 aa5.86□□□□□ -1.47
RPS27BYHR021C MSB4Q12317 492 aa5.79□□□□□ -1.48
RPS27BYHR021C EAP1P36041 632 aaKnown RBP5.78□□□□□ -1.48
RPS27BYHR021C RTG1P32607 177 aa5.76□□□□□ -1.49
RPS27BYHR021C YLR271WQ06152 274 aa5.75□□□□□ -1.49
RPS27BYHR021C MRM1P25270 412 aa5.74□□□□□ -1.49
RPS27BYHR021C NCR1Q12200 1170 aa5.74□□□□□ -1.49
RPS27BYHR021C SET4P42948 560 aa5.73□□□□□ -1.49
RPS27BYHR021C PSD2P53037 1138 aaKnown RBP5.73□□□□□ -1.49
RPS27BYHR021C TRP5P00931 707 aaKnown RBP5.72□□□□□ -1.49
RPS27BYHR021C YOL036WQ08206 761 aa5.72□□□□□ -1.49
RPS27BYHR021C YNL035CP53962 389 aaKnown RBP5.69□□□□□ -1.5
RPS27BYHR021C SEC61P32915 480 aa5.68□□□□□ -1.5
RPS27BYHR021C TFG1P41895 735 aaPredicted RBP5.65□□□□□ -1.5
RPS27BYHR021C DBP1P24784 617 aaKnown RBP5.64□□□□□ -1.51
RPS27BYHR021C YMR1P47147 688 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
RPS27BYHR021C YFR006WP43590 535 aa5.62□□□□□ -1.51
RPS27BYHR021C VMA1P17255 1071 aaKnown RBP5.61□□□□□ -1.51
RPS27BYHR021C SAP30P38429 201 aa5.6□□□□□ -1.51
RPS27BYHR021C VPS29P38759 282 aa5.6□□□□□ -1.51
RPS27BYHR021C BCK2P33306 851 aa5.59□□□□□ -1.51
RPS27BYHR021C SAM3Q08986 587 aa5.58□□□□□ -1.52
RPS27BYHR021C RTG3P38165 486 aa5.57□□□□□ -1.52
RPS27BYHR021C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
RPS27BYHR021C CHL1P22516 861 aaPredicted RBP5.56□□□□□ -1.52
RPS27BYHR021C STS1P38637 319 aa5.56□□□□□ -1.52
RPS27BYHR021C TFA1P36100 482 aa5.55□□□□□ -1.52
RPS27BYHR021C JIP4Q03361 876 aa5.55□□□□□ -1.52
RPS27BYHR021C DAN4P47179 1161 aa5.54□□□□□ -1.52
RPS27BYHR021C YDL129WQ07555 291 aa5.54□□□□□ -1.52
RPS27BYHR021C SSP1P38871 571 aa5.53□□□□□ -1.52
RPS27BYHR021C CST9Q06032 482 aa5.52□□□□□ -1.53
RPS27BYHR021C ABP1P15891 592 aaKnown RBP5.51□□□□□ -1.53
RPS27BYHR021C PRE3P38624 215 aa5.51□□□□□ -1.53
RPS27BYHR021C GYP5Q12344 894 aa5.5□□□□□ -1.53
RPS27BYHR021C HTA1P04911 132 aaKnown RBP5.49□□□□□ -1.53
RPS27BYHR021C HTA2P04912 132 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms