Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 INP51YIL002C 2841 nt2.53□□□□□ -2
PUF3Q07807 KRE33YNL132W 3171 nt2.53□□□□□ -2
PUF3Q07807 FAR11YNL127W 2862 nt2.53□□□□□ -2
PUF3Q07807 MAD1YGL086W 2250 nt2.53□□□□□ -2
PUF3Q07807 YDR354C-AYDR354C-A 144 nt2.52□□□□□ -2.01
PUF3Q07807 RPS29AYLR388W 171 nt2.52□□□□□ -2.01
PUF3Q07807 MSB1YOR188W 3414 nt2.52□□□□□ -2.01 RIP-Chip
PUF3Q07807 YNL018CYNL018C 1839 nt2.52□□□□□ -2.01
PUF3Q07807 SGS1YMR190C 4344 nt2.51□□□□□ -2.01
PUF3Q07807 INP53YOR109W 3324 nt2.51□□□□□ -2.01
PUF3Q07807 SAS3YBL052C 2496 nt2.51□□□□□ -2.01
PUF3Q07807 SPF1YEL031W 3648 nt2.5□□□□□ -2.01
PUF3Q07807 BUB1YGR188C 3066 nt2.5□□□□□ -2.01
PUF3Q07807 PTP2YOR208W 2253 nt2.5□□□□□ -2.01
PUF3Q07807 HSH155YMR288W 2916 nt2.5□□□□□ -2.01
PUF3Q07807 IFH1YLR223C 3258 nt2.5□□□□□ -2.01
PUF3Q07807 VTC3YPL019C 2508 nt2.49□□□□□ -2.01
PUF3Q07807 RCO1YMR075W 2055 nt2.49□□□□□ -2.01
PUF3Q07807 CDC53YDL132W 2448 nt2.49□□□□□ -2.01
PUF3Q07807 ENV11YGR071C 2583 nt2.49□□□□□ -2.01
PUF3Q07807 DGR2YKL121W 2559 nt2.49□□□□□ -2.01
PUF3Q07807 UBP15YMR304W 3693 nt2.48□□□□□ -2.01
PUF3Q07807 YIL002W-AYIL002W-A 210 nt2.48□□□□□ -2.01
PUF3Q07807 KTI11YBL071W-A 249 nt2.48□□□□□ -2.01
PUF3Q07807 YLL054CYLL054C 2532 nt2.48□□□□□ -2.01 RIP-Chip
PUF3Q07807 ZIP1YDR285W 2628 nt2.48□□□□□ -2.01
PUF3Q07807 TRS130YMR218C 3309 nt2.48□□□□□ -2.01
PUF3Q07807 YEF3YLR249W 3135 nt2.48□□□□□ -2.01
PUF3Q07807 MLH1YMR167W 2310 nt2.47□□□□□ -2.01 RIP-Chip
PUF3Q07807 NOP14YDL148C 2433 nt2.47□□□□□ -2.01
PUF3Q07807 YCR102W-AYCR102W-A 198 nt2.47□□□□□ -2.01
PUF3Q07807 YAL067W-AYAL067W-A 228 nt2.47□□□□□ -2.01
PUF3Q07807 SEC16YPL085W 6588 nt2.47□□□□□ -2.01 RIP-Chip
PUF3Q07807 CBF2YGR140W 2871 nt2.47□□□□□ -2.01 RIP-Chip
PUF3Q07807 YJL026C-AYJL026C-A 222 nt2.46□□□□□ -2.02
PUF3Q07807 TTI1YKL033W 3117 nt2.45□□□□□ -2.02
PUF3Q07807 IRC8YJL051W 2469 nt2.45□□□□□ -2.02 RIP-Chip
PUF3Q07807 APL2YKL135C 2181 nt2.44□□□□□ -2.02 RIP-Chip
PUF3Q07807 snR81snR81 201 nt2.44□□□□□ -2.02
PUF3Q07807 YGL182CYGL182C 324 nt2.44□□□□□ -2.02
PUF3Q07807 QCR9YGR183C 201 nt2.44□□□□□ -2.02
PUF3Q07807 SSD1YDR293C 3753 nt2.44□□□□□ -2.02
PUF3Q07807 YLR035C-AYLR035C-A 3468 nt2.43□□□□□ -2.02
PUF3Q07807 YHR131W-AYHR131W-A 246 nt2.43□□□□□ -2.02
PUF3Q07807 DCP2YNL118C 2913 nt2.43□□□□□ -2.02
PUF3Q07807 MMS22YLR320W 4365 nt2.43□□□□□ -2.02
PUF3Q07807 YDR521WYDR521W 336 nt2.42□□□□□ -2.02
PUF3Q07807 SCP160YJL080C 3669 nt2.42□□□□□ -2.02
PUF3Q07807 SAP190YKR028W 3102 nt2.42□□□□□ -2.02
PUF3Q07807 SEC63YOR254C 1992 nt2.41□□□□□ -2.02
PUF3Q07807 YOL098CYOL098C 3114 nt2.41□□□□□ -2.02
PUF3Q07807 YKR075W-AYKR075W-A 270 nt2.41□□□□□ -2.02
PUF3Q07807 ALK1YGL021W 2283 nt2.41□□□□□ -2.02
PUF3Q07807 NUP170YBL079W 4509 nt2.41□□□□□ -2.02
PUF3Q07807 IRA2YOL081W 9240 nt2.4□□□□□ -2.03
PUF3Q07807 NUP100YKL068W 2880 nt2.39□□□□□ -2.03
PUF3Q07807 STB6YKL072W 2301 nt2.39□□□□□ -2.03
PUF3Q07807 YPP1YGR198W 2454 nt2.39□□□□□ -2.03
PUF3Q07807 snR62snR62 100 nt2.38□□□□□ -2.03
PUF3Q07807 LHS1YKL073W 2646 nt2.38□□□□□ -2.03
PUF3Q07807 INO80YGL150C 4470 nt2.37□□□□□ -2.03
PUF3Q07807 TRA1YHR099W 11235 nt2.37□□□□□ -2.03
PUF3Q07807 snR39BsnR39B 96 nt2.37□□□□□ -2.03
PUF3Q07807 APL1YJR005W 2103 nt2.36□□□□□ -2.03
PUF3Q07807 YGR109W-BYGR109W-B 4644 nt2.36□□□□□ -2.03
PUF3Q07807 TFC3YAL001C 3483 nt2.35□□□□□ -2.03
PUF3Q07807 MAK10YEL053C 2202 nt2.35□□□□□ -2.03
PUF3Q07807 UBR1YGR184C 5853 nt2.35□□□□□ -2.03
PUF3Q07807 CSF1YLR087C 8877 nt2.34□□□□□ -2.03
PUF3Q07807 YAL037C-AYAL037C-A 93 nt2.34□□□□□ -2.03
PUF3Q07807 TOF1YNL273W 3717 nt2.34□□□□□ -2.04 RIP-Chip
PUF3Q07807 UBP1YDL122W 2430 nt2.33□□□□□ -2.04
PUF3Q07807 MLH3YPL164C 2148 nt2.33□□□□□ -2.04
PUF3Q07807 YLL020CYLL020C 306 nt2.33□□□□□ -2.04
PUF3Q07807 UTP8YGR128C 2142 nt2.32□□□□□ -2.04
PUF3Q07807 DNF1YER166W 4716 nt2.32□□□□□ -2.04
PUF3Q07807 TIM9YEL020W-A 264 nt2.32□□□□□ -2.04
PUF3Q07807 YJL052C-AYJL052C-A 120 nt2.32□□□□□ -2.04
PUF3Q07807 YBL039C-AYBL039C-A 84 nt2.32□□□□□ -2.04
PUF3Q07807 UFD4YKL010C 4452 nt2.32□□□□□ -2.04
PUF3Q07807 SAP185YJL098W 3177 nt2.32□□□□□ -2.04
PUF3Q07807 PKH2YOL100W 3246 nt2.32□□□□□ -2.04
PUF3Q07807 RAV1YJR033C 4074 nt2.31□□□□□ -2.04
PUF3Q07807 YHR180W-AYHR180W-A 183 nt2.31□□□□□ -2.04
PUF3Q07807 HMI1YOL095C 2121 nt2.31□□□□□ -2.04
PUF3Q07807 UTP22YGR090W 3714 nt2.3□□□□□ -2.04
PUF3Q07807 MSH5YDL154W 2706 nt2.3□□□□□ -2.04
PUF3Q07807 NAB6YML117W 3405 nt2.3□□□□□ -2.04
PUF3Q07807 VPS8YAL002W 3825 nt2.29□□□□□ -2.04
PUF3Q07807 SLX4YLR135W 2247 nt2.29□□□□□ -2.04
PUF3Q07807 GIP3YPL137C 3831 nt2.28□□□□□ -2.04
PUF3Q07807 BFR2YDR299W 1605 nt2.28□□□□□ -2.04
PUF3Q07807 MDS3YGL197W 4464 nt2.27□□□□□ -2.05
PUF3Q07807 COG4YPR105C 2586 nt2.27□□□□□ -2.05
PUF3Q07807 BRE1YDL074C 2103 nt2.27□□□□□ -2.05
PUF3Q07807 YPR097WYPR097W 3222 nt2.27□□□□□ -2.05
PUF3Q07807 RGA1YOR127W 3024 nt2.26□□□□□ -2.05 RIP-Chip
PUF3Q07807 PDR8YLR266C 2106 nt2.26□□□□□ -2.05
PUF3Q07807 YGL123C-AYGL123C-A 231 nt2.26□□□□□ -2.05
PUF3Q07807 BNI1YNL271C 5862 nt2.25□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 29.2 ms