RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W MTC1P47018 478 aaKnown RBP6.6□□□□□ -1.35
HSH155YMR288W FAP1P53971 965 aa6.48□□□□□ -1.37
HSH155YMR288W PRY3P47033 881 aa6.06□□□□□ -1.44
HSH155YMR288W DRS1P32892 752 aaKnown RBP5.88□□□□□ -1.47
HSH155YMR288W AAD16Q02895 342 aa5.81□□□□□ -1.48
HSH155YMR288W PRI1P10363 409 aa5.72□□□□□ -1.49
HSH155YMR288W HAA1Q12753 694 aaKnown RBP5.64□□□□□ -1.51
HSH155YMR288W ISW2Q08773 1120 aa5.63□□□□□ -1.51
HSH155YMR288W RPG1P38249 964 aaKnown RBP5.53□□□□□ -1.52
HSH155YMR288W TSR3Q12094 313 aaKnown RBP5.45□□□□□ -1.54
HSH155YMR288W YCK3P39962 524 aa5.45□□□□□ -1.54
HSH155YMR288W MRPL32P25348 183 aa5.31□□□□□ -1.56
HSH155YMR288W DIP2Q12220 943 aaPredicted RBP5.24□□□□□ -1.57
HSH155YMR288W RSE1Q04693 1361 aaKnown RBP5.21□□□□□ -1.58
HSH155YMR288W YGL015CP33199 130 aa5.15□□□□□ -1.58
HSH155YMR288W REB1P21538 810 aa5.13□□□□□ -1.59
HSH155YMR288W RPL17AP05740 184 aaKnown RBP5.07□□□□□ -1.6
HSH155YMR288W RPL17BP46990 184 aaKnown RBP5.07□□□□□ -1.6
HSH155YMR288W BFR2Q06631 534 aaKnown RBP4.98□□□□□ -1.61
HSH155YMR288W AVT3P36062 692 aa4.86□□□□□ -1.63
HSH155YMR288W CDC27P38042 758 aa4.84□□□□□ -1.63
HSH155YMR288W BUD31P25337 157 aaPredicted RBP4.81□□□□□ -1.64
HSH155YMR288W UBP10P53874 792 aaPredicted RBP4.81□□□□□ -1.64
HSH155YMR288W MAP2P38174 421 aaKnown RBP4.77□□□□□ -1.65
HSH155YMR288W YKR023WP36119 530 aaKnown RBP4.72□□□□□ -1.65
HSH155YMR288W TIF4632P39936 914 aaKnown RBP4.71□□□□□ -1.66
HSH155YMR288W HOP09932 586 aa4.7□□□□□ -1.66
HSH155YMR288W SPT21P35209 758 aa4.68□□□□□ -1.66
HSH155YMR288W SIS1P25294 352 aaKnown RBP4.67□□□□□ -1.66
HSH155YMR288W UBP9P39967 754 aa4.67□□□□□ -1.66
HSH155YMR288W DCD1P06773 312 aa4.67□□□□□ -1.66
HSH155YMR288W SCY1P53009 804 aa4.66□□□□□ -1.66
HSH155YMR288W TFC8Q12308 588 aa4.66□□□□□ -1.66
HSH155YMR288W SLX5P32828 619 aaKnown RBP4.64□□□□□ -1.67
HSH155YMR288W TGL3P40308 642 aa4.59□□□□□ -1.67
HSH155YMR288W INO80P53115 1489 aa4.59□□□□□ -1.67
HSH155YMR288W TFA1P36100 482 aa4.58□□□□□ -1.68
HSH155YMR288W MON2P48563 1636 aaPredicted RBP4.58□□□□□ -1.68
HSH155YMR288W BCH2P36122 765 aa4.49□□□□□ -1.69
HSH155YMR288W RIM101P33400 625 aa4.46□□□□□ -1.69
HSH155YMR288W YIL055CP40523 627 aaKnown RBP4.41□□□□□ -1.7
HSH155YMR288W PTP3P40048 928 aa4.41□□□□□ -1.7
HSH155YMR288W DNA2P38859 1522 aa4.39□□□□□ -1.71
HSH155YMR288W EPS1P40557 701 aa4.39□□□□□ -1.71
HSH155YMR288W YOR238WQ08634 303 aa4.38□□□□□ -1.71
HSH155YMR288W BDF1P35817 686 aa4.35□□□□□ -1.71
HSH155YMR288W YBL029C-AQ3E756 94 aa4.35□□□□□ -1.71
HSH155YMR288W BBC1P47068 1157 aa4.35□□□□□ -1.71
HSH155YMR288W GTT3P39996 337 aa4.31□□□□□ -1.72
HSH155YMR288W SPP1Q03012 353 aa4.31□□□□□ -1.72
HSH155YMR288W WSC3Q12215 556 aa4.31□□□□□ -1.72
HSH155YMR288W YJL171CP46992 396 aa4.3□□□□□ -1.72
HSH155YMR288W YAP5P40574 245 aa4.29□□□□□ -1.72
HSH155YMR288W OXP1P28273 1286 aa4.28□□□□□ -1.72
HSH155YMR288W MST1P07236 462 aa4.27□□□□□ -1.73
HSH155YMR288W VNX1P42839 908 aa4.27□□□□□ -1.73
HSH155YMR288W YAH1Q12184 172 aaKnown RBP4.26□□□□□ -1.73
HSH155YMR288W RSM7P47150 247 aa4.26□□□□□ -1.73
HSH155YMR288W AI2P03876 854 aa4.24□□□□□ -1.73
HSH155YMR288W NSR1P27476 414 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
HSH155YMR288W TIF11P38912 153 aaKnown RBP4.21□□□□□ -1.74
HSH155YMR288W KOG1P38873 1557 aa4.21□□□□□ -1.74
HSH155YMR288W SWR1Q05471 1514 aa4.2□□□□□ -1.74
HSH155YMR288W SPA2P23201 1466 aaKnown RBP4.16□□□□□ -1.74
HSH155YMR288W ULI1P43604 169 aa4.16□□□□□ -1.74
HSH155YMR288W FKH1P40466 484 aa4.15□□□□□ -1.74
HSH155YMR288W PIB1Q06651 286 aa4.15□□□□□ -1.75
HSH155YMR288W BMT6Q12291 365 aa4.15□□□□□ -1.75
HSH155YMR288W AIR2Q12476 344 aaKnown RBP4.15□□□□□ -1.75
HSH155YMR288W LDB19Q12502 818 aa4.15□□□□□ -1.75
HSH155YMR288W EAP1P36041 632 aaKnown RBP4.11□□□□□ -1.75
HSH155YMR288W MRM1P25270 412 aa4.08□□□□□ -1.76
HSH155YMR288W MSB4Q12317 492 aa4.08□□□□□ -1.76
HSH155YMR288W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.08□□□□□ -1.76not detected
HSH155YMR288W TFG1P41895 735 aaPredicted RBP4.08□□□□□ -1.76
HSH155YMR288W SET4P42948 560 aa4.06□□□□□ -1.76
HSH155YMR288W RTG1P32607 177 aa4.05□□□□□ -1.76
HSH155YMR288W YLR271WQ06152 274 aa4.05□□□□□ -1.76
HSH155YMR288W IOC2Q12072 812 aa4.05□□□□□ -1.76
HSH155YMR288W NCR1Q12200 1170 aa4.04□□□□□ -1.76
HSH155YMR288W RQC2Q12532 1038 aaKnown RBP4.03□□□□□ -1.76
HSH155YMR288W SSP1P38871 571 aa4.03□□□□□ -1.76
HSH155YMR288W YOL036WQ08206 761 aa4.03□□□□□ -1.76
HSH155YMR288W PSD2P53037 1138 aaKnown RBP4.01□□□□□ -1.77
HSH155YMR288W TRP5P00931 707 aaKnown RBP4.01□□□□□ -1.77
HSH155YMR288W YNL035CP53962 389 aaKnown RBP4.01□□□□□ -1.77
HSH155YMR288W YMR1P47147 688 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
HSH155YMR288W DBP1P24784 617 aaKnown RBP3.99□□□□□ -1.77
HSH155YMR288W SEC61P32915 480 aa3.99□□□□□ -1.77
HSH155YMR288W YFR006WP43590 535 aa3.99□□□□□ -1.77
HSH155YMR288W RTG3P38165 486 aa3.97□□□□□ -1.77
HSH155YMR288W TY1B-DR4Q07793 1604 aa3.97□□□□□ -1.77
HSH155YMR288W MIF2P35201 549 aa3.96□□□□□ -1.78
HSH155YMR288W TCB3Q03640 1545 aaKnown RBP3.95□□□□□ -1.78
HSH155YMR288W SAP30P38429 201 aa3.95□□□□□ -1.78
HSH155YMR288W VMA1P17255 1071 aaKnown RBP3.95□□□□□ -1.78
HSH155YMR288W ABP1P15891 592 aaKnown RBP3.93□□□□□ -1.78
HSH155YMR288W BCK2P33306 851 aa3.93□□□□□ -1.78
HSH155YMR288W JIP4Q03361 876 aa3.93□□□□□ -1.78
HSH155YMR288W GYP5Q12344 894 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms