RNA–Protein interactions for RNA: YMR218C

TRS130, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS130, Length 3,309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS130YMR218C DRS1P32892 752 aaKnown RBP5.14□□□□□ -1.59
TRS130YMR218C MTC1P47018 478 aaKnown RBP4.95□□□□□ -1.62
TRS130YMR218C BFR2Q06631 534 aaKnown RBP4.71□□□□□ -1.66
TRS130YMR218C TFA1P36100 482 aa4.69□□□□□ -1.66
TRS130YMR218C FAP1P53971 965 aa4.64□□□□□ -1.67
TRS130YMR218C RQC2Q12532 1038 aaKnown RBP4.59□□□□□ -1.67
TRS130YMR218C TAF7Q05021 590 aa4.43□□□□□ -1.7
TRS130YMR218C PRY3P47033 881 aa4.39□□□□□ -1.71
TRS130YMR218C PRI1P10363 409 aa4.36□□□□□ -1.71
TRS130YMR218C AAD16Q02895 342 aa4.31□□□□□ -1.72
TRS130YMR218C YCK3P39962 524 aa4.31□□□□□ -1.72
TRS130YMR218C MON2P48563 1636 aaPredicted RBP4.28□□□□□ -1.73
TRS130YMR218C DMA1P38823 416 aa4.23□□□□□ -1.73
TRS130YMR218C HAA1Q12753 694 aaKnown RBP4.18□□□□□ -1.74
TRS130YMR218C AVT3P36062 692 aa4.15□□□□□ -1.75
TRS130YMR218C DIP2Q12220 943 aaPredicted RBP4.13□□□□□ -1.75
TRS130YMR218C ISW2Q08773 1120 aa4.13□□□□□ -1.75
TRS130YMR218C RPG1P38249 964 aaKnown RBP4.09□□□□□ -1.76
TRS130YMR218C TSR3Q12094 313 aaKnown RBP4.02□□□□□ -1.77
TRS130YMR218C LEO1P38439 464 aa3.98□□□□□ -1.77
TRS130YMR218C PTP3P40048 928 aa3.93□□□□□ -1.78
TRS130YMR218C URN1Q06525 465 aaKnown RBP3.92□□□□□ -1.78
TRS130YMR218C MRPL32P25348 183 aa3.86□□□□□ -1.79
TRS130YMR218C KOG1P38873 1557 aa3.85□□□□□ -1.79
TRS130YMR218C RSE1Q04693 1361 aaKnown RBP3.83□□□□□ -1.8
TRS130YMR218C YGL015CP33199 130 aa3.82□□□□□ -1.8
TRS130YMR218C DMA2P53924 522 aa3.82□□□□□ -1.8
TRS130YMR218C INO80P53115 1489 aa3.78□□□□□ -1.81
TRS130YMR218C SPA2P23201 1466 aaKnown RBP3.75□□□□□ -1.81
TRS130YMR218C AIM44Q99299 758 aa3.74□□□□□ -1.81
TRS130YMR218C LEU3P08638 886 aa3.7□□□□□ -1.82
TRS130YMR218C RPL17AP05740 184 aaKnown RBP3.7□□□□□ -1.82
TRS130YMR218C RPL17BP46990 184 aaKnown RBP3.7□□□□□ -1.82
TRS130YMR218C SWR1Q05471 1514 aa3.7□□□□□ -1.82
TRS130YMR218C DNA2P38859 1522 aa3.69□□□□□ -1.82
TRS130YMR218C ABP1P15891 592 aaKnown RBP3.68□□□□□ -1.82
TRS130YMR218C REB1P21538 810 aa3.68□□□□□ -1.82
TRS130YMR218C BUD31P25337 157 aaPredicted RBP3.68□□□□□ -1.82
TRS130YMR218C CDC27P38042 758 aa3.67□□□□□ -1.82
TRS130YMR218C SSP1P38871 571 aa3.64□□□□□ -1.83
TRS130YMR218C UBP10P53874 792 aaPredicted RBP3.64□□□□□ -1.83
TRS130YMR218C SPT21P35209 758 aa3.63□□□□□ -1.83
TRS130YMR218C YKR023WP36119 530 aaKnown RBP3.63□□□□□ -1.83
TRS130YMR218C IOC4Q04213 475 aa3.63□□□□□ -1.83
TRS130YMR218C YAH1Q12184 172 aaKnown RBP3.62□□□□□ -1.83
TRS130YMR218C RLF2Q12495 606 aa3.62□□□□□ -1.83
TRS130YMR218C TY1B-DR4Q07793 1604 aa3.61□□□□□ -1.83
TRS130YMR218C RPN1P38764 993 aaKnown RBP3.6□□□□□ -1.83
TRS130YMR218C MIF2P35201 549 aa3.6□□□□□ -1.83
TRS130YMR218C SAS10Q12136 610 aaPredicted RBP3.59□□□□□ -1.83
TRS130YMR218C IFH1P39520 1085 aa3.59□□□□□ -1.84
TRS130YMR218C MAP2P38174 421 aaKnown RBP3.57□□□□□ -1.84
TRS130YMR218C SPB4P25808 606 aaPredicted RBP3.57□□□□□ -1.84
TRS130YMR218C NAP1P25293 417 aaKnown RBP3.55□□□□□ -1.84
TRS130YMR218C TFC8Q12308 588 aa3.54□□□□□ -1.84
TRS130YMR218C YML020WQ03722 664 aa3.51□□□□□ -1.85
TRS130YMR218C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
TRS130YMR218C TGL3P40308 642 aa3.49□□□□□ -1.85
TRS130YMR218C BRL1P38770 471 aa3.49□□□□□ -1.85
TRS130YMR218C YRB30P53107 440 aaPredicted RBP3.48□□□□□ -1.85
TRS130YMR218C CKB1P43639 278 aa3.48□□□□□ -1.85
TRS130YMR218C HOP09932 586 aa3.47□□□□□ -1.85
TRS130YMR218C VPS70P47161 811 aa3.47□□□□□ -1.85
TRS130YMR218C RIM101P33400 625 aa3.46□□□□□ -1.86
TRS130YMR218C DCD1P06773 312 aa3.45□□□□□ -1.86
TRS130YMR218C ORC1P54784 914 aaPredicted RBP3.45□□□□□ -1.86
TRS130YMR218C YLR271WQ06152 274 aa3.45□□□□□ -1.86
TRS130YMR218C YIL055CP40523 627 aaKnown RBP3.45□□□□□ -1.86
TRS130YMR218C OXP1P28273 1286 aa3.45□□□□□ -1.86
TRS130YMR218C KIN1P13185 1064 aa3.43□□□□□ -1.86
TRS130YMR218C TIF4632P39936 914 aaKnown RBP3.43□□□□□ -1.86
TRS130YMR218C SLX8P40072 274 aa3.43□□□□□ -1.86
TRS130YMR218C THO2P53552 1597 aaKnown RBP3.43□□□□□ -1.86
TRS130YMR218C CST9Q06032 482 aa3.42□□□□□ -1.86
TRS130YMR218C TCB3Q03640 1545 aaKnown RBP3.42□□□□□ -1.86
TRS130YMR218C SCY1P53009 804 aa3.42□□□□□ -1.86
TRS130YMR218C SLX5P32828 619 aaKnown RBP3.41□□□□□ -1.86
TRS130YMR218C DNF1P32660 1571 aa3.41□□□□□ -1.86
TRS130YMR218C SSK2P53599 1579 aa3.41□□□□□ -1.86
TRS130YMR218C GLC3P32775 704 aa3.41□□□□□ -1.86
TRS130YMR218C MGA2P40578 1113 aa3.41□□□□□ -1.86
TRS130YMR218C UBP9P39967 754 aa3.4□□□□□ -1.86
TRS130YMR218C NOP7P53261 605 aaKnown RBP3.4□□□□□ -1.86
TRS130YMR218C MYO2P19524 1574 aaKnown RBP3.4□□□□□ -1.87
TRS130YMR218C BCH2P36122 765 aa3.39□□□□□ -1.87
TRS130YMR218C IRC20Q06554 1556 aa3.39□□□□□ -1.87
TRS130YMR218C HGH1P48362 394 aaKnown RBP3.39□□□□□ -1.87
TRS130YMR218C SET1P38827 1080 aaKnown RBP3.38□□□□□ -1.87
TRS130YMR218C SIS1P25294 352 aaKnown RBP3.37□□□□□ -1.87
TRS130YMR218C REV3P14284 1504 aa3.37□□□□□ -1.87
TRS130YMR218C MST1P07236 462 aa3.37□□□□□ -1.87
TRS130YMR218C GUA1P38625 525 aaKnown RBP3.37□□□□□ -1.87
TRS130YMR218C MET10P39692 1035 aa3.37□□□□□ -1.87
TRS130YMR218C SSA1P10591 642 aaKnown RBP3.36□□□□□ -1.87
TRS130YMR218C SIS2P36024 562 aa3.36□□□□□ -1.87
TRS130YMR218C NOP8Q08287 484 aaPredicted RBP3.36□□□□□ -1.87
TRS130YMR218C GEF1P37020 779 aa3.35□□□□□ -1.87
TRS130YMR218C RTS3P53289 263 aa3.35□□□□□ -1.87
TRS130YMR218C PEP1P32319 1579 aa3.35□□□□□ -1.87
TRS130YMR218C SUB2Q07478 446 aaKnown RBP3.34□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms