RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B MTC1P47018 478 aaKnown RBP6.44□□□□□ -1.38
snR39BsnR39B FAP1P53971 965 aa6.38□□□□□ -1.39
snR39BsnR39B PRY3P47033 881 aa5.99□□□□□ -1.45
snR39BsnR39B AAD16Q02895 342 aa5.77□□□□□ -1.49
snR39BsnR39B PRI1P10363 409 aa5.72□□□□□ -1.49
snR39BsnR39B HAA1Q12753 694 aaKnown RBP5.67□□□□□ -1.5
snR39BsnR39B YCK3P39962 524 aa5.52□□□□□ -1.53
snR39BsnR39B ISW2Q08773 1120 aa5.52□□□□□ -1.53
snR39BsnR39B DRS1P32892 752 aaKnown RBP5.5□□□□□ -1.53
snR39BsnR39B RPG1P38249 964 aaKnown RBP5.4□□□□□ -1.54
snR39BsnR39B TSR3Q12094 313 aaKnown RBP5.33□□□□□ -1.56
snR39BsnR39B MRPL32P25348 183 aa5.22□□□□□ -1.57
snR39BsnR39B YGL015CP33199 130 aa5.17□□□□□ -1.58
snR39BsnR39B RSE1Q04693 1361 aaKnown RBP5.03□□□□□ -1.6
snR39BsnR39B DIP2Q12220 943 aaPredicted RBP5.01□□□□□ -1.61
snR39BsnR39B REB1P21538 810 aa4.93□□□□□ -1.62
snR39BsnR39B BUD31P25337 157 aaPredicted RBP4.92□□□□□ -1.62
snR39BsnR39B RPL17AP05740 184 aaKnown RBP4.85□□□□□ -1.63
snR39BsnR39B RPL17BP46990 184 aaKnown RBP4.85□□□□□ -1.63
snR39BsnR39B UBP10P53874 792 aaPredicted RBP4.81□□□□□ -1.64
snR39BsnR39B CDC27P38042 758 aa4.75□□□□□ -1.65
snR39BsnR39B MAP2P38174 421 aaKnown RBP4.69□□□□□ -1.66
snR39BsnR39B UBP9P39967 754 aa4.68□□□□□ -1.66
snR39BsnR39B AVT3P36062 692 aa4.67□□□□□ -1.66
snR39BsnR39B SIS1P25294 352 aaKnown RBP4.66□□□□□ -1.66
snR39BsnR39B TIF4632P39936 914 aaKnown RBP4.66□□□□□ -1.66
snR39BsnR39B YKR023WP36119 530 aaKnown RBP4.64□□□□□ -1.67
snR39BsnR39B TGL3P40308 642 aa4.61□□□□□ -1.67
snR39BsnR39B SPT21P35209 758 aa4.58□□□□□ -1.68
snR39BsnR39B TFC8Q12308 588 aa4.57□□□□□ -1.68
snR39BsnR39B SLX5P32828 619 aaKnown RBP4.55□□□□□ -1.68
snR39BsnR39B HOP09932 586 aa4.53□□□□□ -1.68
snR39BsnR39B SCY1P53009 804 aa4.53□□□□□ -1.68
snR39BsnR39B DCD1P06773 312 aa4.49□□□□□ -1.69
snR39BsnR39B BCH2P36122 765 aa4.39□□□□□ -1.71
snR39BsnR39B BFR2Q06631 534 aaKnown RBP4.35□□□□□ -1.71
snR39BsnR39B RIM101P33400 625 aa4.34□□□□□ -1.71
snR39BsnR39B MST1P07236 462 aa4.33□□□□□ -1.72
snR39BsnR39B YOR238WQ08634 303 aa4.32□□□□□ -1.72
snR39BsnR39B YBL029C-AQ3E756 94 aa4.3□□□□□ -1.72
snR39BsnR39B NSR1P27476 414 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
snR39BsnR39B EPS1P40557 701 aa4.26□□□□□ -1.73
snR39BsnR39B VNX1P42839 908 aa4.26□□□□□ -1.73
snR39BsnR39B BDF1P35817 686 aa4.25□□□□□ -1.73
snR39BsnR39B YJL171CP46992 396 aa4.25□□□□□ -1.73
snR39BsnR39B SPP1Q03012 353 aa4.25□□□□□ -1.73
snR39BsnR39B YAP5P40574 245 aa4.22□□□□□ -1.73
snR39BsnR39B YIL055CP40523 627 aaKnown RBP4.18□□□□□ -1.74
snR39BsnR39B BBC1P47068 1157 aa4.18□□□□□ -1.74
snR39BsnR39B TIF11P38912 153 aaKnown RBP4.17□□□□□ -1.74
snR39BsnR39B PTP3P40048 928 aa4.17□□□□□ -1.74
snR39BsnR39B AIR2Q12476 344 aaKnown RBP4.17□□□□□ -1.74
snR39BsnR39B FKH1P40466 484 aa4.16□□□□□ -1.74
snR39BsnR39B WSC3Q12215 556 aa4.16□□□□□ -1.74
snR39BsnR39B GTT3P39996 337 aa4.15□□□□□ -1.75
snR39BsnR39B BMT6Q12291 365 aa4.13□□□□□ -1.75
snR39BsnR39B OXP1P28273 1286 aa4.12□□□□□ -1.75
snR39BsnR39B LDB19Q12502 818 aa4.09□□□□□ -1.75
snR39BsnR39B ULI1P43604 169 aa4.08□□□□□ -1.76
snR39BsnR39B RSM7P47150 247 aa4.08□□□□□ -1.76
snR39BsnR39B AI2P03876 854 aa4.07□□□□□ -1.76
snR39BsnR39B EAP1P36041 632 aaKnown RBP4.07□□□□□ -1.76
snR39BsnR39B IOC2Q12072 812 aa4.05□□□□□ -1.76
snR39BsnR39B MSB4Q12317 492 aa4.05□□□□□ -1.76
snR39BsnR39B NCR1Q12200 1170 aa3.99□□□□□ -1.77
snR39BsnR39B RTG1P32607 177 aa3.98□□□□□ -1.77
snR39BsnR39B SEC61P32915 480 aa3.98□□□□□ -1.77
snR39BsnR39B TFG1P41895 735 aaPredicted RBP3.97□□□□□ -1.77
snR39BsnR39B YNL035CP53962 389 aaKnown RBP3.96□□□□□ -1.78
snR39BsnR39B YAH1Q12184 172 aaKnown RBP3.95□□□□□ -1.78
snR39BsnR39B TRP5P00931 707 aaKnown RBP3.93□□□□□ -1.78
snR39BsnR39B PIB1Q06651 286 aa3.93□□□□□ -1.78
snR39BsnR39B BCK2P33306 851 aa3.92□□□□□ -1.78
snR39BsnR39B YOL036WQ08206 761 aa3.92□□□□□ -1.78
snR39BsnR39B SET4P42948 560 aa3.91□□□□□ -1.78
snR39BsnR39B ABP1P15891 592 aaKnown RBP3.89□□□□□ -1.79
snR39BsnR39B CHL1P22516 861 aaPredicted RBP3.89□□□□□ -1.79
snR39BsnR39B YMR1P47147 688 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
snR39BsnR39B PSD2P53037 1138 aaKnown RBP3.89□□□□□ -1.79
snR39BsnR39B MRM1P25270 412 aa3.88□□□□□ -1.79
snR39BsnR39B JIP4Q03361 876 aa3.88□□□□□ -1.79
snR39BsnR39B TFA1P36100 482 aa3.87□□□□□ -1.79
snR39BsnR39B YLR271WQ06152 274 aa3.86□□□□□ -1.79
snR39BsnR39B SAP30P38429 201 aa3.85□□□□□ -1.79
snR39BsnR39B PRE3P38624 215 aa3.85□□□□□ -1.79
snR39BsnR39B YDL129WQ07555 291 aa3.85□□□□□ -1.79
snR39BsnR39B SAM3Q08986 587 aa3.85□□□□□ -1.79
snR39BsnR39B VMA1P17255 1071 aaKnown RBP3.84□□□□□ -1.79
snR39BsnR39B DBP1P24784 617 aaKnown RBP3.84□□□□□ -1.79
snR39BsnR39B ARP8Q12386 881 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
snR39BsnR39B RTG3P38165 486 aa3.82□□□□□ -1.8
snR39BsnR39B DAN4P47179 1161 aa3.82□□□□□ -1.8
snR39BsnR39B XDJ1P39102 459 aa3.81□□□□□ -1.8
snR39BsnR39B HTA1P04911 132 aaKnown RBP3.8□□□□□ -1.8
snR39BsnR39B HTA2P04912 132 aa3.8□□□□□ -1.8
snR39BsnR39B PTC4P38089 393 aa3.8□□□□□ -1.8
snR39BsnR39B VPS29P38759 282 aa3.79□□□□□ -1.8
snR39BsnR39B YFR006WP43590 535 aa3.78□□□□□ -1.8
snR39BsnR39B GYP5Q12344 894 aa3.78□□□□□ -1.8
snR39BsnR39B VRP1P37370 817 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms