Protein–RNA interactions for Protein: P39967

UBP9, Ubiquitin carboxyl-terminal hydrolase 9, yeastyeast

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP9P39967 POL5YEL055C 3069 nt3.5□□□□□ -1.85
UBP9P39967 tQ(UUG)BtQ(UUG)B 72 nt3.49□□□□□ -1.85
UBP9P39967 RPS22AYJL190C 393 nt3.49□□□□□ -1.85
UBP9P39967 RIC1YLR039C 3171 nt3.49□□□□□ -1.85
UBP9P39967 CHS3YBR023C 3498 nt3.49□□□□□ -1.85
UBP9P39967 DCP2YNL118C 2913 nt3.49□□□□□ -1.85
UBP9P39967 CPA2YJR109C 3357 nt3.49□□□□□ -1.85
UBP9P39967 NFT1YKR103W 3657 nt3.49□□□□□ -1.85
UBP9P39967 PSK2YOL045W 3306 nt3.48□□□□□ -1.85
UBP9P39967 SPO22YIL073C 2928 nt3.48□□□□□ -1.85
UBP9P39967 POL3YDL102W 3294 nt3.48□□□□□ -1.85
UBP9P39967 PRP22YER013W 3438 nt3.47□□□□□ -1.85
UBP9P39967 NOP14YDL148C 2433 nt3.46□□□□□ -1.85
UBP9P39967 RGA1YOR127W 3024 nt3.46□□□□□ -1.85
UBP9P39967 FLO5YHR211W 3228 nt3.46□□□□□ -1.86
UBP9P39967 SEC21YNL287W 2808 nt3.45□□□□□ -1.86
UBP9P39967 PMR1YGL167C 2853 nt3.45□□□□□ -1.86
UBP9P39967 RPS21AYKR057W 264 nt3.45□□□□□ -1.86
UBP9P39967 RRP5YMR229C 5190 nt3.45□□□□□ -1.86
UBP9P39967 YOR296WYOR296W 3870 nt3.44□□□□□ -1.86
UBP9P39967 RAD5YLR032W 3510 nt3.44□□□□□ -1.86
UBP9P39967 YDR464C-AYDR464C-A 189 nt3.44□□□□□ -1.86
UBP9P39967 RGC1YPR115W 3252 nt3.44□□□□□ -1.86
UBP9P39967 SYT1YPR095C 3681 nt3.43□□□□□ -1.86
UBP9P39967 CHO2YGR157W 2610 nt3.43□□□□□ -1.86
UBP9P39967 PDR1YGL013C 3207 nt3.43□□□□□ -1.86
UBP9P39967 YDL159C-BYDL159C-B 177 nt3.43□□□□□ -1.86
UBP9P39967 snR14snR14 160 nt3.43□□□□□ -1.86
UBP9P39967 CDC60YPL160W 3273 nt3.43□□□□□ -1.86
UBP9P39967 CAF120YNL278W 3183 nt3.43□□□□□ -1.86
UBP9P39967 HRD3YLR207W 2502 nt3.43□□□□□ -1.86
UBP9P39967 YEL025CYEL025C 3567 nt3.43□□□□□ -1.86
UBP9P39967 PDR3YBL005W 2931 nt3.42□□□□□ -1.86
UBP9P39967 SEC8YPR055W 3198 nt3.42□□□□□ -1.86
UBP9P39967 XRN1YGL173C 4587 nt3.42□□□□□ -1.86
UBP9P39967 ZRG8YER033C 3231 nt3.42□□□□□ -1.86
UBP9P39967 RPL26BYGR034W 384 nt3.41□□□□□ -1.86
UBP9P39967 ENA2YDR039C 3276 nt3.4□□□□□ -1.86
UBP9P39967 ENA1YDR040C 3276 nt3.4□□□□□ -1.86
UBP9P39967 TRS130YMR218C 3309 nt3.4□□□□□ -1.86
UBP9P39967 RPS28BYLR264W 204 nt3.4□□□□□ -1.87
UBP9P39967 GCN1YGL195W 8019 nt3.4□□□□□ -1.87
UBP9P39967 MRD1YPR112C 2664 nt3.39□□□□□ -1.87
UBP9P39967 RPA190YOR341W 4995 nt3.39□□□□□ -1.87
UBP9P39967 FAS1YKL182W 6156 nt3.39□□□□□ -1.87
UBP9P39967 PKH3YDR466W 2697 nt3.39□□□□□ -1.87
UBP9P39967 RDS3YPR094W 324 nt3.38□□□□□ -1.87
UBP9P39967 RAX2YLR084C 3663 nt3.37□□□□□ -1.87
UBP9P39967 YER172C-AYER172C-A 381 nt3.37□□□□□ -1.87
UBP9P39967 ANS1YHR126C 480 nt3.37□□□□□ -1.87
UBP9P39967 DGR1YNL130C-A 147 nt3.37□□□□□ -1.87
UBP9P39967 STU1YBL034C 4542 nt3.37□□□□□ -1.87
UBP9P39967 VMR1YHL035C 4779 nt3.36□□□□□ -1.87
UBP9P39967 VBA4YDR119W 2307 nt3.36□□□□□ -1.87
UBP9P39967 POM152YMR129W 4014 nt3.35□□□□□ -1.87
UBP9P39967 MET6YER091C 2304 nt3.35□□□□□ -1.87
UBP9P39967 MMS1YPR164W 4224 nt3.35□□□□□ -1.87
UBP9P39967 CDC53YDL132W 2448 nt3.34□□□□□ -1.87
UBP9P39967 FLO9YAL063C 3969 nt3.34□□□□□ -1.87
UBP9P39967 YOR394C-AYOR394C-A 168 nt3.34□□□□□ -1.87
UBP9P39967 VAS1YGR094W 3315 nt3.33□□□□□ -1.88
UBP9P39967 YDL114W-AYDL114W-A 114 nt3.33□□□□□ -1.88
UBP9P39967 RTT10YPL183C 3042 nt3.33□□□□□ -1.88
UBP9P39967 YPR097WYPR097W 3222 nt3.33□□□□□ -1.88
UBP9P39967 SEY1YOR165W 2331 nt3.33□□□□□ -1.88
UBP9P39967 YPL060C-AYPL060C-A 3315 nt3.33□□□□□ -1.88
UBP9P39967 NMD2YHR077C 3270 nt3.32□□□□□ -1.88
UBP9P39967 PSK1YAL017W 4071 nt3.32□□□□□ -1.88
UBP9P39967 STO1YMR125W 2586 nt3.32□□□□□ -1.88
UBP9P39967 UFD4YKL010C 4452 nt3.32□□□□□ -1.88
UBP9P39967 tV(UAC)QtV(UAC)Q 76 nt3.32□□□□□ -1.88
UBP9P39967 ECM21YBL101C 3354 nt3.32□□□□□ -1.88
UBP9P39967 BMS1YPL217C 3552 nt3.31□□□□□ -1.88
UBP9P39967 ESL1YIL151C 3357 nt3.3□□□□□ -1.88
UBP9P39967 GCV2YMR189W 3105 nt3.29□□□□□ -1.88
UBP9P39967 YBT1YLL048C 4986 nt3.29□□□□□ -1.88
UBP9P39967 KSP1YHR082C 3090 nt3.29□□□□□ -1.88
UBP9P39967 VPS3YDR495C 3036 nt3.29□□□□□ -1.88
UBP9P39967 KAP123YER110C 3342 nt3.29□□□□□ -1.88
UBP9P39967 TAE2YPL009C 3117 nt3.28□□□□□ -1.88
UBP9P39967 SPO14YKR031C 5052 nt3.28□□□□□ -1.88
UBP9P39967 MET5YJR137C 4329 nt3.28□□□□□ -1.89
UBP9P39967 ALY2YJL084C 3141 nt3.27□□□□□ -1.89
UBP9P39967 ILS1YBL076C 3219 nt3.26□□□□□ -1.89
UBP9P39967 YDR034C-DYDR034C-D 5313 nt3.25□□□□□ -1.89
UBP9P39967 SAC3YDR159W 3906 nt3.25□□□□□ -1.89
UBP9P39967 SWR1YDR334W 4545 nt3.24□□□□□ -1.89
UBP9P39967 YIL169CYIL169C 2988 nt3.24□□□□□ -1.89
UBP9P39967 SEC26YDR238C 2922 nt3.24□□□□□ -1.89
UBP9P39967 STT4YLR305C 5703 nt3.24□□□□□ -1.89
UBP9P39967 YLR278CYLR278C 4026 nt3.23□□□□□ -1.89
UBP9P39967 PRP6YBR055C 2700 nt3.23□□□□□ -1.89
UBP9P39967 YMR160WYMR160W 2451 nt3.22□□□□□ -1.89
UBP9P39967 NUP100YKL068W 2880 nt3.22□□□□□ -1.89
UBP9P39967 RTT101YJL047C 2529 nt3.22□□□□□ -1.89
UBP9P39967 NET1YJL076W 3570 nt3.22□□□□□ -1.89
UBP9P39967 SCP160YJL080C 3669 nt3.22□□□□□ -1.89
UBP9P39967 NUT1YGL151W 3399 nt3.22□□□□□ -1.89
UBP9P39967 FLO1YAR050W 4614 nt3.21□□□□□ -1.89
UBP9P39967 YOR055WYOR055W 435 nt3.21□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 19.9 ms