RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	DRS1	P32892	752 aa	Known RBP	6.35	□□□□□ -1.39
RIC1	YLR039C	MTC1	P47018	478 aa	Known RBP	6.12	□□□□□ -1.43
RIC1	YLR039C	BFR2	Q06631	534 aa	Known RBP	5.57	□□□□□ -1.52
RIC1	YLR039C	TFA1	P36100	482 aa		5.36	□□□□□ -1.55
RIC1	YLR039C	AVT3	P36062	692 aa		5.34	□□□□□ -1.55
RIC1	YLR039C	DIP2	Q12220	943 aa	Predicted RBP	5.34	□□□□□ -1.55
RIC1	YLR039C	RSE1	Q04693	1361 aa	Known RBP	4.95	□□□□□ -1.62
RIC1	YLR039C	ISW2	Q08773	1120 aa		4.89	□□□□□ -1.63
RIC1	YLR039C	RPG1	P38249	964 aa	Known RBP	4.88	□□□□□ -1.63
RIC1	YLR039C	PRI1	P10363	409 aa		4.81	□□□□□ -1.64
RIC1	YLR039C	FAP1	P53971	965 aa		4.81	□□□□□ -1.64
RIC1	YLR039C	RPL17A	P05740	184 aa	Known RBP	4.79	□□□□□ -1.64
RIC1	YLR039C	RPL17B	P46990	184 aa	Known RBP	4.79	□□□□□ -1.64
RIC1	YLR039C	REB1	P21538	810 aa		4.68	□□□□□ -1.66
RIC1	YLR039C	AAD16	Q02895	342 aa		4.68	□□□□□ -1.66
RIC1	YLR039C	SPT21	P35209	758 aa		4.65	□□□□□ -1.67
RIC1	YLR039C	TSR3	Q12094	313 aa	Known RBP	4.61	□□□□□ -1.67
RIC1	YLR039C	RIM101	P33400	625 aa		4.6	□□□□□ -1.67
RIC1	YLR039C	RQC2	Q12532	1038 aa	Known RBP	4.6	□□□□□ -1.67
RIC1	YLR039C	PTP3	P40048	928 aa		4.6	□□□□□ -1.67
RIC1	YLR039C	DMA1	P38823	416 aa		4.52	□□□□□ -1.69
RIC1	YLR039C	OXP1	P28273	1286 aa		4.51	□□□□□ -1.69
RIC1	YLR039C	PRY3	P47033	881 aa		4.5	□□□□□ -1.69
RIC1	YLR039C	SSP1	P38871	571 aa		4.47	□□□□□ -1.69
RIC1	YLR039C	YKR023W	P36119	530 aa	Known RBP	4.47	□□□□□ -1.69
RIC1	YLR039C	YAH1	Q12184	172 aa	Known RBP	4.45	□□□□□ -1.7
RIC1	YLR039C	YLR271W	Q06152	274 aa		4.41	□□□□□ -1.7
RIC1	YLR039C	HO	P09932	586 aa		4.39	□□□□□ -1.71
RIC1	YLR039C	DCD1	P06773	312 aa		4.39	□□□□□ -1.71
RIC1	YLR039C	YIL055C	P40523	627 aa	Known RBP	4.37	□□□□□ -1.71
RIC1	YLR039C	MRPL32	P25348	183 aa		4.36	□□□□□ -1.71
RIC1	YLR039C	TFC8	Q12308	588 aa		4.36	□□□□□ -1.71
RIC1	YLR039C	YCK3	P39962	524 aa		4.35	□□□□□ -1.71
RIC1	YLR039C	CDC27	P38042	758 aa		4.34	□□□□□ -1.71
RIC1	YLR039C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
RIC1	YLR039C	RSM7	P47150	247 aa		4.32	□□□□□ -1.72
RIC1	YLR039C	CST9	Q06032	482 aa		4.3	□□□□□ -1.72
RIC1	YLR039C	MGA2	P40578	1113 aa		4.28	□□□□□ -1.72
RIC1	YLR039C	BCH2	P36122	765 aa		4.26	□□□□□ -1.73
RIC1	YLR039C	PSD2	P53037	1138 aa	Known RBP	4.25	□□□□□ -1.73
RIC1	YLR039C	AI2	P03876	854 aa		4.24	□□□□□ -1.73
RIC1	YLR039C	HAA1	Q12753	694 aa	Known RBP	4.2	□□□□□ -1.74
RIC1	YLR039C	SAS10	Q12136	610 aa	Predicted RBP	4.18	□□□□□ -1.74
RIC1	YLR039C	EPS1	P40557	701 aa		4.17	□□□□□ -1.74
RIC1	YLR039C	RCR1	P38212	213 aa		4.16	□□□□□ -1.74
RIC1	YLR039C	BBC1	P47068	1157 aa		4.15	□□□□□ -1.74
RIC1	YLR039C	RAM2	P29703	316 aa		4.15	□□□□□ -1.75
RIC1	YLR039C	BDF1	P35817	686 aa		4.15	□□□□□ -1.75
RIC1	YLR039C	MRM1	P25270	412 aa		4.14	□□□□□ -1.75
RIC1	YLR039C	SCY1	P53009	804 aa		4.13	□□□□□ -1.75
RIC1	YLR039C	LEO1	P38439	464 aa		4.12	□□□□□ -1.75
RIC1	YLR039C	MAP2	P38174	421 aa	Known RBP	4.11	□□□□□ -1.75
RIC1	YLR039C	TAF7	Q05021	590 aa		4.1	□□□□□ -1.75
RIC1	YLR039C	LEU3	P08638	886 aa		4.08	□□□□□ -1.76
RIC1	YLR039C	SET1	P38827	1080 aa	Known RBP	4.07	□□□□□ -1.76
RIC1	YLR039C	RTG3	P38165	486 aa		4.05	□□□□□ -1.76
RIC1	YLR039C	VPS29	P38759	282 aa		4.04	□□□□□ -1.76
RIC1	YLR039C	UBP10	P53874	792 aa	Predicted RBP	4.04	□□□□□ -1.76
RIC1	YLR039C	VPS70	P47161	811 aa		4.02	□□□□□ -1.77
RIC1	YLR039C	MAK11	P20484	414 aa	Known RBP	4.02	□□□□□ -1.77
RIC1	YLR039C	YPR148C	Q06523	435 aa		4.02	□□□□□ -1.77
RIC1	YLR039C	SLX5	P32828	619 aa	Known RBP	4	□□□□□ -1.77
RIC1	YLR039C	YGL015C	P33199	130 aa		3.99	□□□□□ -1.77
RIC1	YLR039C	STS1	P38637	319 aa		3.99	□□□□□ -1.77
RIC1	YLR039C	COQ8	P27697	501 aa		3.98	□□□□□ -1.77
RIC1	YLR039C	YFR006W	P43590	535 aa		3.98	□□□□□ -1.77
RIC1	YLR039C	SPB4	P25808	606 aa	Predicted RBP	3.97	□□□□□ -1.77
RIC1	YLR039C	EDS1	P38073	919 aa		3.97	□□□□□ -1.77
RIC1	YLR039C	CKB1	P43639	278 aa		3.95	□□□□□ -1.78
RIC1	YLR039C	DBP1	P24784	617 aa	Known RBP	3.95	□□□□□ -1.78
RIC1	YLR039C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	3.95	□□□□□ -1.78	not detected
RIC1	YLR039C	MIF2	P35201	549 aa		3.94	□□□□□ -1.78
RIC1	YLR039C	RPN1	P38764	993 aa	Known RBP	3.94	□□□□□ -1.78
RIC1	YLR039C	DMA2	P53924	522 aa		3.94	□□□□□ -1.78
RIC1	YLR039C	IFH1	P39520	1085 aa		3.93	□□□□□ -1.78
RIC1	YLR039C	PIB1	Q06651	286 aa		3.93	□□□□□ -1.78
RIC1	YLR039C	PBS2	P08018	668 aa		3.92	□□□□□ -1.78
RIC1	YLR039C	DSF2	P38213	736 aa		3.92	□□□□□ -1.78
RIC1	YLR039C	YOR238W	Q08634	303 aa		3.92	□□□□□ -1.78
RIC1	YLR039C	PTC3	P34221	468 aa	Known RBP	3.89	□□□□□ -1.79
RIC1	YLR039C	ABP1	P15891	592 aa	Known RBP	3.88	□□□□□ -1.79
RIC1	YLR039C	REF2	P42073	533 aa	Predicted RBP	3.87	□□□□□ -1.79
RIC1	YLR039C	NOP53	Q12080	455 aa	Known RBP	3.87	□□□□□ -1.79
RIC1	YLR039C	DIT2	P21595	489 aa		3.86	□□□□□ -1.79
RIC1	YLR039C	IES2	P40154	320 aa		3.86	□□□□□ -1.79
RIC1	YLR039C	GLC3	P32775	704 aa		3.86	□□□□□ -1.79
RIC1	YLR039C	NUP42	P49686	430 aa	Known RBP	3.86	□□□□□ -1.79
RIC1	YLR039C	VMA1	P17255	1071 aa	Known RBP	3.85	□□□□□ -1.79
RIC1	YLR039C	MAM3	Q12296	706 aa		3.85	□□□□□ -1.79
RIC1	YLR039C	TIF4632	P39936	914 aa	Known RBP	3.85	□□□□□ -1.79
RIC1	YLR039C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	3.84	□□□□□ -1.79	not detected
RIC1	YLR039C	YAP5	P40574	245 aa		3.84	□□□□□ -1.79
RIC1	YLR039C	KIN1	P13185	1064 aa		3.84	□□□□□ -1.79
RIC1	YLR039C	TGL3	P40308	642 aa		3.84	□□□□□ -1.8
RIC1	YLR039C	YNR021W	P53723	404 aa	Known RBP	3.84	□□□□□ -1.8
RIC1	YLR039C	VHR2	P40041	505 aa		3.83	□□□□□ -1.8
RIC1	YLR039C	YDR090C	Q03193	310 aa		3.83	□□□□□ -1.8
RIC1	YLR039C	UBP14	P38237	781 aa	Known RBP	3.82	□□□□□ -1.8
RIC1	YLR039C	COX6	P00427	148 aa		3.81	□□□□□ -1.8
RIC1	YLR039C	YLR326W	Q06170	240 aa	Known RBP	3.8	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms