RNA–Protein interactions for RNA: YAL017W

PSK1, Transcript of PAS domain-containing serine/threonine protein kinase, yeast

Gene PSK1, Length 4,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSK1	YAL017W	DRS1	P32892	752 aa	Known RBP	6.04	□□□□□ -1.44
PSK1	YAL017W	TFA1	P36100	482 aa		5.63	□□□□□ -1.51
PSK1	YAL017W	MTC1	P47018	478 aa	Known RBP	5.62	□□□□□ -1.51
PSK1	YAL017W	BFR2	Q06631	534 aa	Known RBP	5.55	□□□□□ -1.52
PSK1	YAL017W	RQC2	Q12532	1038 aa	Known RBP	5.45	□□□□□ -1.54
PSK1	YAL017W	TAF7	Q05021	590 aa		5.42	□□□□□ -1.54
PSK1	YAL017W	DMA1	P38823	416 aa		5.09	□□□□□ -1.59
PSK1	YAL017W	AVT3	P36062	692 aa		4.93	□□□□□ -1.62
PSK1	YAL017W	DIP2	Q12220	943 aa	Predicted RBP	4.85	□□□□□ -1.63
PSK1	YAL017W	LEO1	P38439	464 aa		4.83	□□□□□ -1.64
PSK1	YAL017W	FAP1	P53971	965 aa		4.76	□□□□□ -1.65
PSK1	YAL017W	PTP3	P40048	928 aa		4.65	□□□□□ -1.67
PSK1	YAL017W	DMA2	P53924	522 aa		4.64	□□□□□ -1.67
PSK1	YAL017W	IOC4	Q04213	475 aa		4.58	□□□□□ -1.68
PSK1	YAL017W	ABP1	P15891	592 aa	Known RBP	4.57	□□□□□ -1.68
PSK1	YAL017W	URN1	Q06525	465 aa	Known RBP	4.56	□□□□□ -1.68
PSK1	YAL017W	RPG1	P38249	964 aa	Known RBP	4.55	□□□□□ -1.68
PSK1	YAL017W	ISW2	Q08773	1120 aa		4.53	□□□□□ -1.68
PSK1	YAL017W	PRI1	P10363	409 aa		4.51	□□□□□ -1.69
PSK1	YAL017W	RSE1	Q04693	1361 aa	Known RBP	4.51	□□□□□ -1.69
PSK1	YAL017W	LEU3	P08638	886 aa		4.47	□□□□□ -1.69
PSK1	YAL017W	IFH1	P39520	1085 aa		4.47	□□□□□ -1.69
PSK1	YAL017W	NAP1	P25293	417 aa	Known RBP	4.46	□□□□□ -1.7
PSK1	YAL017W	PRY3	P47033	881 aa		4.45	□□□□□ -1.7
PSK1	YAL017W	AAD16	Q02895	342 aa		4.43	□□□□□ -1.7
PSK1	YAL017W	RPL17A	P05740	184 aa	Known RBP	4.42	□□□□□ -1.7
PSK1	YAL017W	RPL17B	P46990	184 aa	Known RBP	4.42	□□□□□ -1.7
PSK1	YAL017W	YCK3	P39962	524 aa		4.4	□□□□□ -1.71
PSK1	YAL017W	TSR3	Q12094	313 aa	Known RBP	4.4	□□□□□ -1.71
PSK1	YAL017W	AIM44	Q99299	758 aa		4.38	□□□□□ -1.71
PSK1	YAL017W	RLF2	Q12495	606 aa		4.38	□□□□□ -1.71
PSK1	YAL017W	REB1	P21538	810 aa		4.36	□□□□□ -1.71
PSK1	YAL017W	SAS10	Q12136	610 aa	Predicted RBP	4.35	□□□□□ -1.71
PSK1	YAL017W	ORC1	P54784	914 aa	Predicted RBP	4.34	□□□□□ -1.72
PSK1	YAL017W	RPN1	P38764	993 aa	Known RBP	4.31	□□□□□ -1.72
PSK1	YAL017W	SPT21	P35209	758 aa		4.3	□□□□□ -1.72
PSK1	YAL017W	SSP1	P38871	571 aa		4.29	□□□□□ -1.72
PSK1	YAL017W	YML020W	Q03722	664 aa		4.28	□□□□□ -1.72
PSK1	YAL017W	DCD1	P06773	312 aa		4.25	□□□□□ -1.73
PSK1	YAL017W	YAH1	Q12184	172 aa	Known RBP	4.23	□□□□□ -1.73
PSK1	YAL017W	SPB4	P25808	606 aa	Predicted RBP	4.22	□□□□□ -1.73
PSK1	YAL017W	YKR023W	P36119	530 aa	Known RBP	4.2	□□□□□ -1.74
PSK1	YAL017W	CKB1	P43639	278 aa		4.19	□□□□□ -1.74
PSK1	YAL017W	OXP1	P28273	1286 aa		4.18	□□□□□ -1.74
PSK1	YAL017W	SLX8	P40072	274 aa		4.18	□□□□□ -1.74
PSK1	YAL017W	SNU71	P53207	620 aa	Known RBP	4.17	□□□□□ -1.74
PSK1	YAL017W	BRL1	P38770	471 aa		4.16	□□□□□ -1.74
PSK1	YAL017W	HO	P09932	586 aa		4.16	□□□□□ -1.74
PSK1	YAL017W	RIM101	P33400	625 aa		4.16	□□□□□ -1.74
PSK1	YAL017W	CDC27	P38042	758 aa		4.15	□□□□□ -1.75
PSK1	YAL017W	YRB30	P53107	440 aa	Predicted RBP	4.13	□□□□□ -1.75
PSK1	YAL017W	NOP8	Q08287	484 aa	Predicted RBP	4.12	□□□□□ -1.75
PSK1	YAL017W	MRPL32	P25348	183 aa		4.12	□□□□□ -1.75
PSK1	YAL017W	KIN1	P13185	1064 aa		4.11	□□□□□ -1.75
PSK1	YAL017W	VPS70	P47161	811 aa		4.11	□□□□□ -1.75
PSK1	YAL017W	YLR271W	Q06152	274 aa		4.11	□□□□□ -1.75
PSK1	YAL017W	NOP7	P53261	605 aa	Known RBP	4.1	□□□□□ -1.75
PSK1	YAL017W	LAM6	Q08001	693 aa		4.1	□□□□□ -1.75
PSK1	YAL017W	TOP1	P04786	769 aa		4.1	□□□□□ -1.75
PSK1	YAL017W	MET10	P39692	1035 aa		4.08	□□□□□ -1.76
PSK1	YAL017W	ATG36	P46983	293 aa		4.08	□□□□□ -1.76
PSK1	YAL017W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
PSK1	YAL017W	YJR008W	P47085	338 aa		4.07	□□□□□ -1.76
PSK1	YAL017W	CST9	Q06032	482 aa		4.07	□□□□□ -1.76
PSK1	YAL017W	MAM3	Q12296	706 aa		4.07	□□□□□ -1.76
PSK1	YAL017W	GUA1	P38625	525 aa	Known RBP	4.07	□□□□□ -1.76
PSK1	YAL017W	GLC3	P32775	704 aa		4.06	□□□□□ -1.76
PSK1	YAL017W	SSA1	P10591	642 aa	Known RBP	4.05	□□□□□ -1.76
PSK1	YAL017W	GEF1	P37020	779 aa		4.05	□□□□□ -1.76
PSK1	YAL017W	SUB2	Q07478	446 aa	Known RBP	4.05	□□□□□ -1.76
PSK1	YAL017W	NUG1	P40010	520 aa	Known RBP	4.05	□□□□□ -1.76
PSK1	YAL017W	BRN1	P38170	754 aa		4.04	□□□□□ -1.76
PSK1	YAL017W	MRX12	P47084	519 aa		4.04	□□□□□ -1.76
PSK1	YAL017W	TFC8	Q12308	588 aa		4.04	□□□□□ -1.76
PSK1	YAL017W	RTS3	P53289	263 aa		4.03	□□□□□ -1.76
PSK1	YAL017W	MDG1	P53885	366 aa		4.03	□□□□□ -1.76
PSK1	YAL017W	SWE1	P32944	819 aa		4.02	□□□□□ -1.77
PSK1	YAL017W	HAA1	Q12753	694 aa	Known RBP	4.02	□□□□□ -1.77
PSK1	YAL017W	MGA2	P40578	1113 aa		4.02	□□□□□ -1.77
PSK1	YAL017W	RRN6	P32786	894 aa		4.01	□□□□□ -1.77
PSK1	YAL017W	SPC42	P36094	363 aa		4.01	□□□□□ -1.77
PSK1	YAL017W	SET1	P38827	1080 aa	Known RBP	4.01	□□□□□ -1.77
PSK1	YAL017W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
PSK1	YAL017W	YIL055C	P40523	627 aa	Known RBP	4	□□□□□ -1.77
PSK1	YAL017W	PKC1	P24583	1151 aa		3.99	□□□□□ -1.77
PSK1	YAL017W	PAM1	P37304	830 aa	Known RBP	3.99	□□□□□ -1.77
PSK1	YAL017W	BCH2	P36122	765 aa		3.99	□□□□□ -1.77
PSK1	YAL017W	BUD21	Q08492	214 aa	Predicted RBP	3.99	□□□□□ -1.77
PSK1	YAL017W	TFB3	Q03290	321 aa		3.98	□□□□□ -1.77
PSK1	YAL017W	ALD4	P46367	519 aa	Known RBP	3.97	□□□□□ -1.77
PSK1	YAL017W	HGH1	P48362	394 aa	Known RBP	3.97	□□□□□ -1.77
PSK1	YAL017W	FAR11	P53917	953 aa		3.97	□□□□□ -1.77
PSK1	YAL017W	TPO2	P53283	614 aa		3.97	□□□□□ -1.77
PSK1	YAL017W	DIT2	P21595	489 aa		3.96	□□□□□ -1.77
PSK1	YAL017W	PBS2	P08018	668 aa		3.96	□□□□□ -1.78
PSK1	YAL017W	YJL007C	P47080	104 aa		3.95	□□□□□ -1.78
PSK1	YAL017W	RAM2	P29703	316 aa		3.95	□□□□□ -1.78
PSK1	YAL017W	YTA7	P40340	1379 aa		3.95	□□□□□ -1.78
PSK1	YAL017W	ERG12	P07277	443 aa		3.95	□□□□□ -1.78
PSK1	YAL017W	DSF2	P38213	736 aa		3.94	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms