RNA–Protein interactions for RNA: YKR031C

SPO14, Transcript of Phospholipase D, yeastyeast

Gene SPO14, Length 5,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO14YKR031C MTC1P47018 478 aaKnown RBP4.63□□□□□ -1.67
SPO14YKR031C DRS1P32892 752 aaKnown RBP4.59□□□□□ -1.68
SPO14YKR031C RQC2Q12532 1038 aaKnown RBP4.57□□□□□ -1.68
SPO14YKR031C SPA2P23201 1466 aaKnown RBP4.53□□□□□ -1.68
SPO14YKR031C INO80P53115 1489 aa4.51□□□□□ -1.69
SPO14YKR031C SGS1P35187 1447 aa4.49□□□□□ -1.69
SPO14YKR031C SAS10Q12136 610 aaPredicted RBP4.37□□□□□ -1.71
SPO14YKR031C TCB3Q03640 1545 aaKnown RBP4.33□□□□□ -1.72
SPO14YKR031C RTT106P40161 455 aa4.32□□□□□ -1.72
SPO14YKR031C TAF7Q05021 590 aa4.3□□□□□ -1.72
SPO14YKR031C TAF2P23255 1407 aa4.3□□□□□ -1.72
SPO14YKR031C IFH1P39520 1085 aa4.29□□□□□ -1.72
SPO14YKR031C RSE1Q04693 1361 aaKnown RBP4.27□□□□□ -1.73
SPO14YKR031C SKI3P17883 1432 aaKnown RBP4.26□□□□□ -1.73
SPO14YKR031C TFA1P36100 482 aa4.24□□□□□ -1.73
SPO14YKR031C SPT6P23615 1451 aaKnown RBP4.21□□□□□ -1.74
SPO14YKR031C PAF1P38351 445 aa4.2□□□□□ -1.74
SPO14YKR031C SCT1P32784 759 aa4.2□□□□□ -1.74
SPO14YKR031C SSN2P38931 1420 aa4.19□□□□□ -1.74
SPO14YKR031C NOP7P53261 605 aaKnown RBP4.15□□□□□ -1.75
SPO14YKR031C XRN1P22147 1528 aaKnown RBP4.15□□□□□ -1.75
SPO14YKR031C NAP1P25293 417 aaKnown RBP4.15□□□□□ -1.75
SPO14YKR031C KOG1P38873 1557 aa4.13□□□□□ -1.75
SPO14YKR031C BUD4P47136 1447 aa4.12□□□□□ -1.75
SPO14YKR031C CKB1P43639 278 aa4.12□□□□□ -1.75
SPO14YKR031C SWR1Q05471 1514 aa4.07□□□□□ -1.76
SPO14YKR031C ECM5Q03214 1411 aa4.07□□□□□ -1.76
SPO14YKR031C STH1P32597 1359 aa4.06□□□□□ -1.76
SPO14YKR031C YTA7P40340 1379 aa4.06□□□□□ -1.76
SPO14YKR031C DNA2P38859 1522 aa4.06□□□□□ -1.76
SPO14YKR031C BUD21Q08492 214 aaPredicted RBP4.05□□□□□ -1.76
SPO14YKR031C MON2P48563 1636 aaPredicted RBP4.04□□□□□ -1.76
SPO14YKR031C URN1Q06525 465 aaKnown RBP4.04□□□□□ -1.76
SPO14YKR031C HSL1P34244 1518 aa4.04□□□□□ -1.76
SPO14YKR031C POL5P39985 1022 aaKnown RBP4.03□□□□□ -1.76
SPO14YKR031C ORC1P54784 914 aaPredicted RBP4.03□□□□□ -1.76
SPO14YKR031C SMC4Q12267 1418 aa4.02□□□□□ -1.77
SPO14YKR031C MRX12P47084 519 aa4.01□□□□□ -1.77
SPO14YKR031C TRM732Q03496 1420 aa4□□□□□ -1.77
SPO14YKR031C MYO2P19524 1574 aaKnown RBP4□□□□□ -1.77
SPO14YKR031C ABP1P15891 592 aaKnown RBP4□□□□□ -1.77
SPO14YKR031C FPR3P38911 411 aaKnown RBP3.99□□□□□ -1.77
SPO14YKR031C REV3P14284 1504 aa3.99□□□□□ -1.77
SPO14YKR031C LEU3P08638 886 aa3.98□□□□□ -1.77
SPO14YKR031C HIR3P47171 1648 aa3.98□□□□□ -1.77
SPO14YKR031C THO2P53552 1597 aaKnown RBP3.97□□□□□ -1.77
SPO14YKR031C PAN1P32521 1480 aa3.96□□□□□ -1.78
SPO14YKR031C STU1P38198 1513 aa3.95□□□□□ -1.78
SPO14YKR031C MET10P39692 1035 aa3.95□□□□□ -1.78
SPO14YKR031C ENP1P38333 483 aaKnown RBP3.94□□□□□ -1.78
SPO14YKR031C UFD4P33202 1483 aa3.92□□□□□ -1.78
SPO14YKR031C MDS3P53094 1487 aa3.92□□□□□ -1.78
SPO14YKR031C TY1B-DR4Q07793 1604 aa3.91□□□□□ -1.78
SPO14YKR031C PAP2P53632 584 aaKnown RBP3.91□□□□□ -1.78
SPO14YKR031C BPT1P14772 1559 aa3.89□□□□□ -1.79
SPO14YKR031C CHD1P32657 1468 aa3.89□□□□□ -1.79
SPO14YKR031C BFR2Q06631 534 aaKnown RBP3.89□□□□□ -1.79
SPO14YKR031C DRS2P39524 1355 aa3.88□□□□□ -1.79
SPO14YKR031C TAF5P38129 798 aa3.88□□□□□ -1.79
SPO14YKR031C MMS22Q06164 1454 aa3.87□□□□□ -1.79
SPO14YKR031C SIS2P36024 562 aa3.87□□□□□ -1.79
SPO14YKR031C MNN4P36044 1178 aa3.87□□□□□ -1.79
SPO14YKR031C RTF1P53064 558 aa3.87□□□□□ -1.79
SPO14YKR031C NOP8Q08287 484 aaPredicted RBP3.86□□□□□ -1.79
SPO14YKR031C RKR1Q04781 1562 aa3.85□□□□□ -1.79
SPO14YKR031C IKI3Q06706 1349 aaKnown RBP3.85□□□□□ -1.79
SPO14YKR031C TOP2P06786 1428 aaKnown RBP3.85□□□□□ -1.79
SPO14YKR031C SPP41P38904 1435 aa3.85□□□□□ -1.79
SPO14YKR031C ESL2P36168 1195 aa3.84□□□□□ -1.79
SPO14YKR031C NUP157P40064 1391 aaKnown RBP3.84□□□□□ -1.79
SPO14YKR031C SEC3P33332 1336 aaKnown RBP3.84□□□□□ -1.8
SPO14YKR031C SIN3P22579 1536 aa3.83□□□□□ -1.8
SPO14YKR031C YPK9Q12697 1472 aa3.82□□□□□ -1.8
SPO14YKR031C YJL181WP46987 611 aa3.82□□□□□ -1.8
SPO14YKR031C BNR1P40450 1375 aa3.82□□□□□ -1.8
SPO14YKR031C KAR2P16474 682 aaKnown RBP3.81□□□□□ -1.8
SPO14YKR031C RIA1P53893 1110 aa3.81□□□□□ -1.8
SPO14YKR031C MYO4P32492 1471 aa3.81□□□□□ -1.8
SPO14YKR031C SSK2P53599 1579 aa3.81□□□□□ -1.8
SPO14YKR031C YOR1P53049 1477 aa3.8□□□□□ -1.8
SPO14YKR031C KIP3P53086 805 aaKnown RBP3.8□□□□□ -1.8
SPO14YKR031C EAF7P53911 425 aaKnown RBP3.8□□□□□ -1.8
SPO14YKR031C POL1P13382 1468 aa3.8□□□□□ -1.8
SPO14YKR031C GEA2P39993 1459 aaKnown RBP3.8□□□□□ -1.8
SPO14YKR031C NOP2P40991 618 aaKnown RBP3.8□□□□□ -1.8
SPO14YKR031C NUP159P40477 1460 aa3.79□□□□□ -1.8
SPO14YKR031C KRI1P42846 591 aaKnown RBP3.79□□□□□ -1.8
SPO14YKR031C YCF1P39109 1515 aaKnown RBP3.79□□□□□ -1.8
SPO14YKR031C MMS1Q06211 1407 aa3.78□□□□□ -1.8
SPO14YKR031C MIF2P35201 549 aa3.78□□□□□ -1.8
SPO14YKR031C CSE4P36012 229 aa3.78□□□□□ -1.8
SPO14YKR031C ESP1Q03018 1630 aa3.78□□□□□ -1.8
SPO14YKR031C SRB8P25648 1427 aa3.77□□□□□ -1.81
SPO14YKR031C TSC11P40061 1430 aa3.77□□□□□ -1.81
SPO14YKR031C GEA1P47102 1408 aaPredicted RBP3.77□□□□□ -1.81
SPO14YKR031C CHZ1P40019 153 aaPredicted RBP3.77□□□□□ -1.81
SPO14YKR031C TAF8Q03750 510 aa3.77□□□□□ -1.81
SPO14YKR031C CAT8P39113 1433 aa3.77□□□□□ -1.81
SPO14YKR031C PDS5Q04264 1277 aa3.76□□□□□ -1.81
SPO14YKR031C NSR1P27476 414 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms