Protein–RNA interactions for Protein: P40453

UBP7, Ubiquitin carboxyl-terminal hydrolase 7, yeastyeast

Predictions only

Length 1,071 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP7P40453 FIG2YCR089W 4830 nt1.96□□□□□ -2.1
UBP7P40453 MSH6YDR097C 3729 nt1.96□□□□□ -2.1
UBP7P40453 ZIP1YDR285W 2628 nt1.96□□□□□ -2.1
UBP7P40453 MVP1YMR004W 1536 nt1.96□□□□□ -2.1
UBP7P40453 CDC36YDL165W 576 nt1.95□□□□□ -2.1
UBP7P40453 YJL135WYJL135W 318 nt1.95□□□□□ -2.1
UBP7P40453 YLR035C-AYLR035C-A 3468 nt1.95□□□□□ -2.1
UBP7P40453 SCW11YGL028C 1629 nt1.95□□□□□ -2.1
UBP7P40453 LYS14YDR034C 2373 nt1.94□□□□□ -2.1
UBP7P40453 MAK10YEL053C 2202 nt1.94□□□□□ -2.1
UBP7P40453 snR55snR55 98 nt1.94□□□□□ -2.1
UBP7P40453 YEL020C-BYEL020C-B 198 nt1.94□□□□□ -2.1
UBP7P40453 Q0092Q0092 141 nt1.94□□□□□ -2.1
UBP7P40453 YER088C-AYER088C-A 324 nt1.94□□□□□ -2.1
UBP7P40453 ANS1YHR126C 480 nt1.94□□□□□ -2.1
UBP7P40453 YNL028WYNL028W 318 nt1.94□□□□□ -2.1
UBP7P40453 NEO1YIL048W 3456 nt1.94□□□□□ -2.1
UBP7P40453 YHR214C-BYHR214C-B 5382 nt1.93□□□□□ -2.1
UBP7P40453 IRE1YHR079C 3348 nt1.93□□□□□ -2.1
UBP7P40453 BPH1YCR032W 6504 nt1.93□□□□□ -2.1
UBP7P40453 AGC1YPR021C 2709 nt1.93□□□□□ -2.1
UBP7P40453 GCN2YDR283C 4980 nt1.93□□□□□ -2.1
UBP7P40453 HIR3YJR140C 4947 nt1.93□□□□□ -2.1
UBP7P40453 LCD1YDR499W 2244 nt1.93□□□□□ -2.1
UBP7P40453 YGL007C-AYGL007C-A 87 nt1.93□□□□□ -2.1
UBP7P40453 YGL041CYGL041C 204 nt1.93□□□□□ -2.1
UBP7P40453 YHR071C-AYHR071C-A 321 nt1.93□□□□□ -2.1
UBP7P40453 YMR046W-AYMR046W-A 129 nt1.93□□□□□ -2.1
UBP7P40453 YNL337WYNL337W 255 nt1.93□□□□□ -2.1
UBP7P40453 SPT21YMR179W 2277 nt1.92□□□□□ -2.1
UBP7P40453 ZRG17YNR039C 1818 nt1.92□□□□□ -2.1
UBP7P40453 ABF2YMR072W 552 nt1.92□□□□□ -2.1
UBP7P40453 YBR064WYBR064W 429 nt1.92□□□□□ -2.1
UBP7P40453 MSC6YOR354C 2079 nt1.92□□□□□ -2.1
UBP7P40453 YJR039WYJR039W 3366 nt1.92□□□□□ -2.1
UBP7P40453 SAS3YBL052C 2496 nt1.91□□□□□ -2.1
UBP7P40453 SEC63YOR254C 1992 nt1.91□□□□□ -2.1
UBP7P40453 YDR406W-AYDR406W-A 246 nt1.91□□□□□ -2.1
UBP7P40453 CSE2YNR010W 450 nt1.91□□□□□ -2.1
UBP7P40453 HMI1YOL095C 2121 nt1.91□□□□□ -2.1
UBP7P40453 VIK1YPL253C 1944 nt1.9□□□□□ -2.11
UBP7P40453 snR72snR72 98 nt1.9□□□□□ -2.11
UBP7P40453 YMR272W-BYMR272W-B 108 nt1.9□□□□□ -2.11
UBP7P40453 YNL144CYNL144C 2223 nt1.9□□□□□ -2.11
UBP7P40453 PEP1YBL017C 4740 nt1.89□□□□□ -2.11
UBP7P40453 FRK1YPL141C 2598 nt1.89□□□□□ -2.11
UBP7P40453 YLL032CYLL032C 2478 nt1.89□□□□□ -2.11
UBP7P40453 YDR003W-AYDR003W-A 123 nt1.89□□□□□ -2.11
UBP7P40453 SEY1YOR165W 2331 nt1.88□□□□□ -2.11
UBP7P40453 SSS1YDR086C 243 nt1.88□□□□□ -2.11
UBP7P40453 PFD1YJL179W 330 nt1.88□□□□□ -2.11
UBP7P40453 YMR307C-AYMR307C-A 195 nt1.88□□□□□ -2.11
UBP7P40453 MYO4YAL029C 4416 nt1.88□□□□□ -2.11
UBP7P40453 SRP14YDL092W 441 nt1.87□□□□□ -2.11
UBP7P40453 YJL197C-AYJL197C-A 282 nt1.87□□□□□ -2.11
UBP7P40453 CTR9YOL145C 3234 nt1.87□□□□□ -2.11
UBP7P40453 FAB1YFR019W 6837 nt1.86□□□□□ -2.11
UBP7P40453 KCS1YDR017C 3153 nt1.86□□□□□ -2.11
UBP7P40453 MSH5YDL154W 2706 nt1.86□□□□□ -2.11
UBP7P40453 MDM20YOL076W 2391 nt1.86□□□□□ -2.11
UBP7P40453 RLM1YPL089C 2031 nt1.86□□□□□ -2.11
UBP7P40453 YGL052WYGL052W 306 nt1.85□□□□□ -2.11
UBP7P40453 YMR230W-AYMR230W-A 189 nt1.85□□□□□ -2.11
UBP7P40453 YOL160WYOL160W 342 nt1.85□□□□□ -2.11
UBP7P40453 YOR108C-AYOR108C-A 210 nt1.85□□□□□ -2.11
UBP7P40453 YCK3YER123W 1575 nt1.85□□□□□ -2.11
UBP7P40453 PKH3YDR466W 2697 nt1.84□□□□□ -2.11
UBP7P40453 HSH155YMR288W 2916 nt1.84□□□□□ -2.11
UBP7P40453 ZIP2YGL249W 2115 nt1.84□□□□□ -2.11
UBP7P40453 MLH3YPL164C 2148 nt1.84□□□□□ -2.11
UBP7P40453 PDE2YOR360C 1581 nt1.84□□□□□ -2.12
UBP7P40453 PAU2YEL049W 363 nt1.83□□□□□ -2.12
UBP7P40453 GPG1YGL121C 381 nt1.82□□□□□ -2.12
UBP7P40453 PAM16YJL104W 450 nt1.82□□□□□ -2.12
UBP7P40453 YMR242W-AYMR242W-A 90 nt1.82□□□□□ -2.12
UBP7P40453 YOR218CYOR218C 420 nt1.82□□□□□ -2.12
UBP7P40453 DNF3YMR162C 4971 nt1.82□□□□□ -2.12
UBP7P40453 RTP1YMR185W 2946 nt1.82□□□□□ -2.12
UBP7P40453 YLR120W-AYLR120W-A 102 nt1.81□□□□□ -2.12
UBP7P40453 YMR172C-AYMR172C-A 384 nt1.81□□□□□ -2.12
UBP7P40453 SKI3YPR189W 4299 nt1.8□□□□□ -2.12
UBP7P40453 PAU3YCR104W 375 nt1.8□□□□□ -2.12
UBP7P40453 YDL007C-AYDL007C-A 258 nt1.8□□□□□ -2.12
UBP7P40453 YMR321CYMR321C 318 nt1.8□□□□□ -2.12
UBP7P40453 IES4YOR189W 351 nt1.8□□□□□ -2.12
UBP7P40453 MYO1YHR023W 5787 nt1.8□□□□□ -2.12
UBP7P40453 DGR2YKL121W 2559 nt1.79□□□□□ -2.12
UBP7P40453 INA22YIR024C 651 nt1.79□□□□□ -2.12
UBP7P40453 YNL338WYNL338W 159 nt1.79□□□□□ -2.12
UBP7P40453 YLR419WYLR419W 4308 nt1.79□□□□□ -2.12
UBP7P40453 YGR109W-BYGR109W-B 4644 nt1.79□□□□□ -2.12
UBP7P40453 YCS4YLR272C 3531 nt1.78□□□□□ -2.12
UBP7P40453 LRE1YCL051W 1752 nt1.78□□□□□ -2.12
UBP7P40453 RPL31AYDL075W 342 nt1.78□□□□□ -2.12
UBP7P40453 ATP8Q0080 147 nt1.78□□□□□ -2.12
UBP7P40453 RPS27BYHR021C 249 nt1.78□□□□□ -2.12
UBP7P40453 YBL008W-AYBL008W-A 240 nt1.78□□□□□ -2.12
UBP7P40453 YLR466C-BYLR466C-B 117 nt1.78□□□□□ -2.12
UBP7P40453 IRC20YLR247C 4671 nt1.78□□□□□ -2.13
UBP7P40453 VPS54YDR027C 2670 nt1.77□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms