Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
BEST4Q8NFU0 AC005332.7-201ENST00000614046 2005 ntBASIC17.37■□□□□ 0.37
BEST4Q8NFU0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 AC011484.1-201ENST00000377652 1995 ntBASIC17.36■□□□□ 0.37
BEST4Q8NFU0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
BEST4Q8NFU0 AC005332.8-201ENST00000622750 2735 ntBASIC17.35■□□□□ 0.37
BEST4Q8NFU0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.35■□□□□ 0.37
BEST4Q8NFU0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 BX842568.3-201ENST00000418104 571 ntBASIC17.35■□□□□ 0.37
BEST4Q8NFU0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.35■□□□□ 0.37
BEST4Q8NFU0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST4Q8NFU0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST4Q8NFU0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
BEST4Q8NFU0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST4Q8NFU0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
BEST4Q8NFU0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
BEST4Q8NFU0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
BEST4Q8NFU0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.34■□□□□ 0.37
BEST4Q8NFU0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.34■□□□□ 0.37
BEST4Q8NFU0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.34■□□□□ 0.37
BEST4Q8NFU0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BEST4Q8NFU0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BEST4Q8NFU0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BEST4Q8NFU0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST4Q8NFU0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BEST4Q8NFU0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.33■□□□□ 0.37
BEST4Q8NFU0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BEST4Q8NFU0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.33■□□□□ 0.37
BEST4Q8NFU0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BEST4Q8NFU0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BEST4Q8NFU0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.33■□□□□ 0.37
BEST4Q8NFU0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
BEST4Q8NFU0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
BEST4Q8NFU0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.33■□□□□ 0.37
BEST4Q8NFU0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BEST4Q8NFU0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
BEST4Q8NFU0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST4Q8NFU0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BEST4Q8NFU0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST4Q8NFU0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST4Q8NFU0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST4Q8NFU0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
BEST4Q8NFU0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST4Q8NFU0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST4Q8NFU0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST4Q8NFU0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms