RNA–Protein interactions for RNA: ENST00000540563.5

ARSE-205, Transcript of arylsulfatase E, human

TSL 2 BASIC

Gene ARSE, Length 1,990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARSE-205	ENST00000540563	NISCH	Q9Y2I1	1504 aa		45.42	■■■■■ 4.86
ARSE-205	ENST00000540563	CCDC180	Q9P1Z9	1646 aa		39.46	■■■■□ 3.91
ARSE-205	ENST00000540563	ZCCHC6	Q5VYS8	1495 aa	Known RBP	38.17	■■■■□ 3.7
ARSE-205	ENST00000540563	DCAF1	Q9Y4B6	1507 aa		37.56	■■■■□ 3.6
ARSE-205	ENST00000540563	DCAF8L2	P0C7V8	631 aa		37.51	■■■■□ 3.6
ARSE-205	ENST00000540563	ABCC9	O60706	1549 aa		37.2	■■■■□ 3.55
ARSE-205	ENST00000540563	SHROOM4	Q9ULL8	1493 aa		37.18	■■■■□ 3.54
ARSE-205	ENST00000540563	MYO15B	Q96JP2	1530 aa		37.05	■■■■□ 3.52
ARSE-205	ENST00000540563	NACAD	O15069	1562 aa		36.76	■■■■□ 3.48
ARSE-205	ENST00000540563	RB1CC1	Q8TDY2	1594 aa		36.39	■■■■□ 3.42
ARSE-205	ENST00000540563	SCRIB	Q14160	1630 aa		36.33	■■■■□ 3.41
ARSE-205	ENST00000540563	SUPT5H	O00267	1087 aa	Known RBP	35.91	■■■■□ 3.34
ARSE-205	ENST00000540563	UNC13A	Q9UPW8	1703 aa		35.61	■■■■□ 3.29
ARSE-205	ENST00000540563	RSF1	Q96T23	1441 aa	Predicted RBP	35.33	■■■■□ 3.25
ARSE-205	ENST00000540563	BICRA	Q9NZM4	1560 aa		35.29	■■■■□ 3.24
ARSE-205	ENST00000540563	CECR2	Q9BXF3	1484 aa		35.28	■■■■□ 3.24
ARSE-205	ENST00000540563	PABPN1	Q86U42	306 aa	Known RBP eCLIP	35.16	■■■■□ 3.22
ARSE-205	ENST00000540563	MROH2B	Q7Z745	1585 aa		35.09	■■■■□ 3.21
ARSE-205	ENST00000540563	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	35.05	■■■■□ 3.2
ARSE-205	ENST00000540563	SMARCA4	P51532	1647 aa		34.84	■■■■□ 3.17
ARSE-205	ENST00000540563	WIZ	O95785	1651 aa		34.79	■■■■□ 3.16
ARSE-205	ENST00000540563	CHIC1	Q5VXU3	224 aa		34.47	■■■■□ 3.11
ARSE-205	ENST00000540563	TOP2A	P11388	1531 aa	Known RBP	34.44	■■■■□ 3.1
ARSE-205	ENST00000540563	PEG3	Q9GZU2	1588 aa		34.43	■■■■□ 3.1
ARSE-205	ENST00000540563	ATAD2B	Q9ULI0	1458 aa		34.26	■■■■□ 3.08
ARSE-205	ENST00000540563	SMARCA2	P51531	1590 aa		34.24	■■■■□ 3.07
ARSE-205	ENST00000540563	EIF4G1	Q04637	1599 aa	Known RBP	34.21	■■■■□ 3.07
ARSE-205	ENST00000540563	CCDC88B	A6NC98	1476 aa		34.13	■■■■□ 3.05
ARSE-205	ENST00000540563	BAZ1B	Q9UIG0	1483 aa	Known RBP	34.07	■■■■□ 3.04
ARSE-205	ENST00000540563	NCAPD3	P42695	1498 aa		33.96	■■■■□ 3.03
ARSE-205	ENST00000540563	HMGXB3	Q12766	1538 aa		33.88	■■■■□ 3.01
ARSE-205	ENST00000540563	TRIM41	Q8WV44	630 aa		33.76	■■■■□ 3
ARSE-205	ENST00000540563	CC2D2A	Q9P2K1	1620 aa		33.66	■■■□□ 2.98
ARSE-205	ENST00000540563	ABCC8	Q09428	1581 aa		33.44	■■■□□ 2.94
ARSE-205	ENST00000540563	CFTR	P13569	1480 aa		33.25	■■■□□ 2.91
ARSE-205	ENST00000540563	WRN	Q14191	1432 aa	Predicted RBP eCLIP	33.24	■■■□□ 2.91
ARSE-205	ENST00000540563	LOC105371045	A0A1W2PR82	267 aa		33.17	■■■□□ 2.9
ARSE-205	ENST00000540563	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.13	■■■□□ 2.89
ARSE-205	ENST00000540563	CADPS	Q9ULU8	1353 aa		33.11	■■■□□ 2.89
ARSE-205	ENST00000540563	SYNJ1	O43426	1573 aa		33.05	■■■□□ 2.88
ARSE-205	ENST00000540563	PRDM2	Q13029	1718 aa		32.99	■■■□□ 2.87
ARSE-205	ENST00000540563	TOP2B	Q02880	1626 aa		32.92	■■■□□ 2.86
ARSE-205	ENST00000540563	SOGA1	O94964	1423 aa		32.88	■■■□□ 2.85
ARSE-205	ENST00000540563	EEA1	Q15075	1411 aa		32.87	■■■□□ 2.85
ARSE-205	ENST00000540563	BIVM-ERCC5	R4GMW8	1640 aa		32.86	■■■□□ 2.85
ARSE-205	ENST00000540563	DNAJC5B	Q9UF47	199 aa		32.81	■■■□□ 2.84
ARSE-205	ENST00000540563	CUX1	P39880	1505 aa		32.79	■■■□□ 2.84
ARSE-205	ENST00000540563	RUSC2	Q8N2Y8	1516 aa		32.74	■■■□□ 2.83
ARSE-205	ENST00000540563	LAMC3	Q9Y6N6	1575 aa		32.74	■■■□□ 2.83
ARSE-205	ENST00000540563	NES	P48681	1621 aa		32.72	■■■□□ 2.83
ARSE-205	ENST00000540563	FANCD2	Q9BXW9	1451 aa		32.72	■■■□□ 2.83
ARSE-205	ENST00000540563	CSRNP3	Q8WYN3	585 aa		32.71	■■■□□ 2.83
ARSE-205	ENST00000540563	EHMT2	Q96KQ7	1210 aa		32.64	■■■□□ 2.82
ARSE-205	ENST00000540563	PDS5B	Q9NTI5	1447 aa		32.52	■■■□□ 2.8
ARSE-205	ENST00000540563	CEP164	Q9UPV0	1460 aa		32.48	■■■□□ 2.79
ARSE-205	ENST00000540563	DNMBP	Q6XZF7	1577 aa		32.43	■■■□□ 2.78
ARSE-205	ENST00000540563	FGD5	Q6ZNL6	1462 aa		32.41	■■■□□ 2.78
ARSE-205	ENST00000540563	GOLGA3	Q08378	1498 aa		32.4	■■■□□ 2.78
ARSE-205	ENST00000540563	KIF27	Q86VH2	1401 aa		32.39	■■■□□ 2.78
ARSE-205	ENST00000540563	KIF21B	O75037	1637 aa		32.38	■■■□□ 2.77
ARSE-205	ENST00000540563	TOPBP1	Q92547	1522 aa		32.37	■■■□□ 2.77
ARSE-205	ENST00000540563	TNIK	Q9UKE5	1360 aa		32.37	■■■□□ 2.77
ARSE-205	ENST00000540563	UBTF	P17480	764 aa	Known RBP	32.3	■■■□□ 2.76
ARSE-205	ENST00000540563	URB2	Q14146	1524 aa	Known RBP	32.29	■■■□□ 2.76
ARSE-205	ENST00000540563	KIF21A	Q7Z4S6	1674 aa		32.28	■■■□□ 2.76
ARSE-205	ENST00000540563	CUX2	O14529	1486 aa		32.25	■■■□□ 2.75
ARSE-205	ENST00000540563	POLA1	P09884	1462 aa	Predicted RBP	32.24	■■■□□ 2.75
ARSE-205	ENST00000540563	PRX	Q9BXM0	1461 aa		32.22	■■■□□ 2.75
ARSE-205	ENST00000540563	RAPGEF2	Q9Y4G8	1499 aa		32.2	■■■□□ 2.75
ARSE-205	ENST00000540563	CEP162	Q5TB80	1403 aa		32.18	■■■□□ 2.74
ARSE-205	ENST00000540563	ERICH3	Q5RHP9	1530 aa		32.15	■■■□□ 2.74
ARSE-205	ENST00000540563	ABCA10	Q8WWZ4	1543 aa		32.14	■■■□□ 2.74
ARSE-205	ENST00000540563	RAD54L2	Q9Y4B4	1467 aa		32.14	■■■□□ 2.74
ARSE-205	ENST00000540563	IGF1R	P08069	1367 aa		32.1	■■■□□ 2.73
ARSE-205	ENST00000540563	MRC2	Q9UBG0	1479 aa		32.05	■■■□□ 2.72
ARSE-205	ENST00000540563	WDR97	A6NE52	1622 aa		31.95	■■■□□ 2.71
ARSE-205	ENST00000540563	CARMIL1	Q5VZK9	1371 aa		31.94	■■■□□ 2.7
ARSE-205	ENST00000540563	CLIP1	P30622	1438 aa		31.9	■■■□□ 2.7
ARSE-205	ENST00000540563	ERCC6	Q03468	1493 aa		31.89	■■■□□ 2.69
ARSE-205	ENST00000540563	WDR62	O43379	1518 aa		31.87	■■■□□ 2.69
ARSE-205	ENST00000540563	TARBP1	Q13395	1621 aa	Known RBP	31.86	■■■□□ 2.69
ARSE-205	ENST00000540563	TDRD9	Q8NDG6	1382 aa	Known RBP	31.83	■■■□□ 2.69
ARSE-205	ENST00000540563	PCGF6	Q9BYE7	350 aa		31.83	■■■□□ 2.69
ARSE-205	ENST00000540563	ABCA5	Q8WWZ7	1642 aa		31.82	■■■□□ 2.69
ARSE-205	ENST00000540563	TRIM26	Q12899	539 aa	Predicted RBP	31.81	■■■□□ 2.68
ARSE-205	ENST00000540563	GAPVD1	Q14C86	1478 aa		31.8	■■■□□ 2.68
ARSE-205	ENST00000540563	CUL7	Q14999	1698 aa		31.77	■■■□□ 2.68
ARSE-205	ENST00000540563	IFT140	Q96RY7	1462 aa		31.71	■■■□□ 2.67
ARSE-205	ENST00000540563	THOC2	Q8NI27	1593 aa	Known RBP	31.7	■■■□□ 2.67
ARSE-205	ENST00000540563	RANGAP1	P46060	587 aa	Predicted RBP	31.7	■■■□□ 2.66
ARSE-205	ENST00000540563	VPS8	Q8N3P4	1428 aa		31.65	■■■□□ 2.66
ARSE-205	ENST00000540563	AQR	O60306	1485 aa	Known RBP eCLIP	31.6	■■■□□ 2.65	8e-6	■■■■□ 23.2
ARSE-205	ENST00000540563	PPARGC1B	Q86YN6	1023 aa	Known RBP	31.57	■■■□□ 2.65
ARSE-205	ENST00000540563	ARAP1	Q96P48	1450 aa		31.54	■■■□□ 2.64
ARSE-205	ENST00000540563	PBRM1	Q86U86	1689 aa		31.53	■■■□□ 2.64
ARSE-205	ENST00000540563	ZNF608	Q9ULD9	1512 aa	Predicted RBP	31.52	■■■□□ 2.64
ARSE-205	ENST00000540563	GRIN2B	Q13224	1484 aa		31.52	■■■□□ 2.64
ARSE-205	ENST00000540563	ARHGAP35	Q9NRY4	1499 aa		31.52	■■■□□ 2.64
ARSE-205	ENST00000540563	FHAD1	B1AJZ9	1412 aa		31.46	■■■□□ 2.63
ARSE-205	ENST00000540563	CTTNBP2	Q8WZ74	1663 aa		31.42	■■■□□ 2.62

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms