RNA–Protein interactions for RNA: ENST00000628037.2

PTGER3-212, Transcript of prostaglandin E receptor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTGER3, Length 1,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER3-212ENST00000628037 NISCHQ9Y2I1 1504 aa46.87■■■■■ 5.09
PTGER3-212ENST00000628037 CCDC180Q9P1Z9 1646 aa40.77■■■■■ 4.12
PTGER3-212ENST00000628037 ZCCHC6Q5VYS8 1495 aaKnown RBP39.31■■■■□ 3.88
PTGER3-212ENST00000628037 DCAF8L2P0C7V8 631 aa38.96■■■■□ 3.83
PTGER3-212ENST00000628037 ABCC9O60706 1549 aa38.93■■■■□ 3.82
PTGER3-212ENST00000628037 DCAF1Q9Y4B6 1507 aa38.67■■■■□ 3.78
PTGER3-212ENST00000628037 MYO15BQ96JP2 1530 aa38.27■■■■□ 3.72
PTGER3-212ENST00000628037 SHROOM4Q9ULL8 1493 aa38.27■■■■□ 3.72
PTGER3-212ENST00000628037 NACADO15069 1562 aa38.11■■■■□ 3.69
PTGER3-212ENST00000628037 RB1CC1Q8TDY2 1594 aa37.81■■■■□ 3.64
PTGER3-212ENST00000628037 SCRIBQ14160 1630 aa37.62■■■■□ 3.61
PTGER3-212ENST00000628037 UNC13AQ9UPW8 1703 aa36.99■■■■□ 3.51
PTGER3-212ENST00000628037 PABPN1Q86U42 306 aaKnown RBP eCLIP36.8■■■■□ 3.48
PTGER3-212ENST00000628037 SUPT5HO00267 1087 aaKnown RBP36.75■■■■□ 3.47
PTGER3-212ENST00000628037 BICRAQ9NZM4 1560 aa36.74■■■■□ 3.47
PTGER3-212ENST00000628037 CECR2Q9BXF3 1484 aa36.52■■■■□ 3.44
PTGER3-212ENST00000628037 RSF1Q96T23 1441 aaPredicted RBP36.36■■■■□ 3.41
PTGER3-212ENST00000628037 MROH2BQ7Z745 1585 aa36.25■■■■□ 3.39
PTGER3-212ENST00000628037 BAZ1AQ9NRL2 1556 aaPredicted RBP36.15■■■■□ 3.38
PTGER3-212ENST00000628037 SMARCA4P51532 1647 aa36.01■■■■□ 3.35
PTGER3-212ENST00000628037 WIZO95785 1651 aa35.9■■■■□ 3.34
PTGER3-212ENST00000628037 EIF4G1Q04637 1599 aaKnown RBP35.63■■■■□ 3.29
PTGER3-212ENST00000628037 PEG3Q9GZU2 1588 aa35.56■■■■□ 3.28
PTGER3-212ENST00000628037 ATAD2BQ9ULI0 1458 aa35.54■■■■□ 3.28
PTGER3-212ENST00000628037 TOP2AP11388 1531 aaKnown RBP35.48■■■■□ 3.27
PTGER3-212ENST00000628037 SMARCA2P51531 1590 aa35.43■■■■□ 3.26
PTGER3-212ENST00000628037 BAZ1BQ9UIG0 1483 aaKnown RBP35.29■■■■□ 3.24
PTGER3-212ENST00000628037 NCAPD3P42695 1498 aa35.25■■■■□ 3.23
PTGER3-212ENST00000628037 CCDC88BA6NC98 1476 aa35.21■■■■□ 3.23
PTGER3-212ENST00000628037 CC2D2AQ9P2K1 1620 aa35.15■■■■□ 3.22
PTGER3-212ENST00000628037 HMGXB3Q12766 1538 aa35.1■■■■□ 3.21
PTGER3-212ENST00000628037 CHIC1Q5VXU3 224 aa35.08■■■■□ 3.21
PTGER3-212ENST00000628037 DNAJC5BQ9UF47 199 aa34.64■■■■□ 3.14
PTGER3-212ENST00000628037 TRIM41Q8WV44 630 aa34.52■■■■□ 3.12
PTGER3-212ENST00000628037 CFTRP13569 1480 aa34.43■■■■□ 3.1
PTGER3-212ENST00000628037 ABCC8Q09428 1581 aa34.4■■■■□ 3.1
PTGER3-212ENST00000628037 CADPSQ9ULU8 1353 aa34.37■■■■□ 3.09
PTGER3-212ENST00000628037 WRNQ14191 1432 aaPredicted RBP eCLIP34.19■■■■□ 3.06
PTGER3-212ENST00000628037 NESP48681 1621 aa34.14■■■■□ 3.06
PTGER3-212ENST00000628037 SYNJ1O43426 1573 aa34.03■■■■□ 3.04
PTGER3-212ENST00000628037 PRDM2Q13029 1718 aa34■■■■□ 3.03
PTGER3-212ENST00000628037 LAMC3Q9Y6N6 1575 aa34■■■■□ 3.03
PTGER3-212ENST00000628037 FANCD2Q9BXW9 1451 aa33.96■■■■□ 3.03
PTGER3-212ENST00000628037 FAM9AQ8IZU1 332 aaPredicted RBP33.96■■■■□ 3.03
PTGER3-212ENST00000628037 CUX1P39880 1505 aa33.88■■■■□ 3.01
PTGER3-212ENST00000628037 TOP2BQ02880 1626 aa33.87■■■■□ 3.01
PTGER3-212ENST00000628037 LOC105371045A0A1W2PR82 267 aa33.81■■■■□ 3
PTGER3-212ENST00000628037 PDS5BQ9NTI5 1447 aa33.81■■■■□ 3
PTGER3-212ENST00000628037 BIVM-ERCC5R4GMW8 1640 aa33.79■■■■□ 3
PTGER3-212ENST00000628037 SOGA1O94964 1423 aa33.79■■■■□ 3
PTGER3-212ENST00000628037 CEP164Q9UPV0 1460 aa33.72■■■□□ 2.99
PTGER3-212ENST00000628037 RUSC2Q8N2Y8 1516 aa33.69■■■□□ 2.98
PTGER3-212ENST00000628037 KIF21AQ7Z4S6 1674 aa33.58■■■□□ 2.97
PTGER3-212ENST00000628037 TOPBP1Q92547 1522 aa33.56■■■□□ 2.96
PTGER3-212ENST00000628037 URB2Q14146 1524 aaKnown RBP33.56■■■□□ 2.96
PTGER3-212ENST00000628037 DNMBPQ6XZF7 1577 aa33.55■■■□□ 2.96
PTGER3-212ENST00000628037 EEA1Q15075 1411 aa33.55■■■□□ 2.96
PTGER3-212ENST00000628037 EHMT2Q96KQ7 1210 aa33.54■■■□□ 2.96
PTGER3-212ENST00000628037 FGD5Q6ZNL6 1462 aa33.53■■■□□ 2.96
PTGER3-212ENST00000628037 CSRNP3Q8WYN3 585 aa33.53■■■□□ 2.96
PTGER3-212ENST00000628037 POLA1P09884 1462 aaPredicted RBP33.4■■■□□ 2.94
PTGER3-212ENST00000628037 MRC2Q9UBG0 1479 aa33.37■■■□□ 2.93
PTGER3-212ENST00000628037 ERCC6Q03468 1493 aa33.35■■■□□ 2.93
PTGER3-212ENST00000628037 RAD54L2Q9Y4B4 1467 aa33.35■■■□□ 2.93
PTGER3-212ENST00000628037 KIF27Q86VH2 1401 aa33.34■■■□□ 2.93
PTGER3-212ENST00000628037 CUX2O14529 1486 aa33.31■■■□□ 2.92
PTGER3-212ENST00000628037 ABCA10Q8WWZ4 1543 aa33.21■■■□□ 2.91
PTGER3-212ENST00000628037 WDR62O43379 1518 aa33.17■■■□□ 2.9
PTGER3-212ENST00000628037 IGF1RP08069 1367 aa33.14■■■□□ 2.9
PTGER3-212ENST00000628037 GOLGA3Q08378 1498 aa33.11■■■□□ 2.89
PTGER3-212ENST00000628037 UBTFP17480 764 aaKnown RBP33.09■■■□□ 2.89
PTGER3-212ENST00000628037 KIF21BO75037 1637 aa33.09■■■□□ 2.89
PTGER3-212ENST00000628037 THOC2Q8NI27 1593 aaKnown RBP33.09■■■□□ 2.89
PTGER3-212ENST00000628037 PRXQ9BXM0 1461 aa33.08■■■□□ 2.89
PTGER3-212ENST00000628037 TDRD9Q8NDG6 1382 aaKnown RBP33.07■■■□□ 2.88
PTGER3-212ENST00000628037 RAPGEF2Q9Y4G8 1499 aa33.06■■■□□ 2.88
PTGER3-212ENST00000628037 TARBP1Q13395 1621 aaKnown RBP33.03■■■□□ 2.88
PTGER3-212ENST00000628037 TNIKQ9UKE5 1360 aa33.03■■■□□ 2.88
PTGER3-212ENST00000628037 WDR97A6NE52 1622 aa33.02■■■□□ 2.88
PTGER3-212ENST00000628037 CARMIL1Q5VZK9 1371 aa32.94■■■□□ 2.86
PTGER3-212ENST00000628037 IFT140Q96RY7 1462 aa32.94■■■□□ 2.86
PTGER3-212ENST00000628037 GAPVD1Q14C86 1478 aa32.92■■■□□ 2.86
PTGER3-212ENST00000628037 ERICH3Q5RHP9 1530 aa32.91■■■□□ 2.86
PTGER3-212ENST00000628037 ABCA5Q8WWZ7 1642 aa32.9■■■□□ 2.86
PTGER3-212ENST00000628037 AQRO60306 1485 aaKnown RBP eCLIP32.87■■■□□ 2.85
PTGER3-212ENST00000628037 ZNF608Q9ULD9 1512 aaPredicted RBP32.84■■■□□ 2.85
PTGER3-212ENST00000628037 CEP162Q5TB80 1403 aa32.83■■■□□ 2.85
PTGER3-212ENST00000628037 CUL7Q14999 1698 aa32.69■■■□□ 2.82
PTGER3-212ENST00000628037 RANGAP1P46060 587 aaPredicted RBP32.68■■■□□ 2.82
PTGER3-212ENST00000628037 GRIN2BQ13224 1484 aa32.67■■■□□ 2.82
PTGER3-212ENST00000628037 CLIP1P30622 1438 aa32.62■■■□□ 2.81
PTGER3-212ENST00000628037 PBRM1Q86U86 1689 aa32.61■■■□□ 2.81
PTGER3-212ENST00000628037 EIF4G3O43432 1585 aaKnown RBP32.6■■■□□ 2.81
PTGER3-212ENST00000628037 FHAD1B1AJZ9 1412 aa32.56■■■□□ 2.8
PTGER3-212ENST00000628037 SNAPC4Q5SXM2 1469 aa32.5■■■□□ 2.79
PTGER3-212ENST00000628037 ADAMTS12P58397 1594 aa32.49■■■□□ 2.79
PTGER3-212ENST00000628037 MAGI1Q96QZ7 1491 aaPredicted RBP32.38■■■□□ 2.77
PTGER3-212ENST00000628037 ARHGAP35Q9NRY4 1499 aa32.34■■■□□ 2.77
PTGER3-212ENST00000628037 ARAP1Q96P48 1450 aa32.32■■■□□ 2.76
PTGER3-212ENST00000628037 CHMP7Q8WUX9 453 aaPredicted RBP32.32■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms