Protein–RNA interactions for Protein: P0CX47

RPS11A, 40S ribosomal protein S11-A, yeastyeast

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS11AP0CX47 YNL054W-BYNL054W-B 5250 nt0.13□□□□□ -2.39
RPS11AP0CX47 TAD1YGL243W 1203 nt0.12□□□□□ -2.39
RPS11AP0CX47 YLR042CYLR042C 486 nt0.12□□□□□ -2.39
RPS11AP0CX47 UBC7YMR022W 498 nt0.12□□□□□ -2.39
RPS11AP0CX47 RPS10BYMR230W 318 nt0.12□□□□□ -2.39
RPS11AP0CX47 PEX34YCL056C 435 nt0.12□□□□□ -2.39
RPS11AP0CX47 PPN1YDR452W 2025 nt0.12□□□□□ -2.39
RPS11AP0CX47 STO1YMR125W 2586 nt0.11□□□□□ -2.39
RPS11AP0CX47 YDR509WYDR509W 348 nt0.11□□□□□ -2.39
RPS11AP0CX47 PAU12YGR294W 363 nt0.11□□□□□ -2.39
RPS11AP0CX47 BET4YJL031C 984 nt0.11□□□□□ -2.39
RPS11AP0CX47 PAU18YLL064C 363 nt0.11□□□□□ -2.39
RPS11AP0CX47 PAU6YNR076W 363 nt0.11□□□□□ -2.39
RPS11AP0CX47 PET20YPL159C 762 nt0.11□□□□□ -2.39
RPS11AP0CX47 NOC3YLR002C 1992 nt0.11□□□□□ -2.39
RPS11AP0CX47 AIM44YPL158C 2277 nt0.11□□□□□ -2.39
RPS11AP0CX47 DBP6YNR038W 1890 nt0.1□□□□□ -2.39
RPS11AP0CX47 OCA6YDR067C 675 nt0.1□□□□□ -2.39
RPS11AP0CX47 POP6YGR030C 477 nt0.1□□□□□ -2.39
RPS11AP0CX47 RPS24BYIL069C 408 nt0.1□□□□□ -2.39
RPS11AP0CX47 YPR170CYPR170C 336 nt0.1□□□□□ -2.39
RPS11AP0CX47 SAG1YJR004C 1953 nt0.1□□□□□ -2.39
RPS11AP0CX47 SGD1YLR336C 2700 nt0.09□□□□□ -2.39
RPS11AP0CX47 RTR2YDR066C 591 nt0.09□□□□□ -2.4
RPS11AP0CX47 RPL42BYHR141C 321 nt0.09□□□□□ -2.4
RPS11AP0CX47 RPL42AYNL162W 321 nt0.09□□□□□ -2.4
RPS11AP0CX47 PXA2YKL188C 2562 nt0.09□□□□□ -2.4
RPS11AP0CX47 THO2YNL139C 4794 nt0.09□□□□□ -2.4
RPS11AP0CX47 BEM3YPL115C 3387 nt0.08□□□□□ -2.4
RPS11AP0CX47 BI3Q0115 1554 nt0.08□□□□□ -2.4
RPS11AP0CX47 YBR184WYBR184W 1572 nt0.08□□□□□ -2.4
RPS11AP0CX47 VPS74YDR372C 1038 nt0.08□□□□□ -2.4
RPS11AP0CX47 LSO2YGR169C-A 279 nt0.08□□□□□ -2.4
RPS11AP0CX47 IMP3YHR148W 552 nt0.08□□□□□ -2.4
RPS11AP0CX47 YMR324CYMR324C 243 nt0.08□□□□□ -2.4
RPS11AP0CX47 YOR169CYOR169C 465 nt0.08□□□□□ -2.4
RPS11AP0CX47 MKT1YNL085W 2493 nt0.07□□□□□ -2.4
RPS11AP0CX47 SRP14YDL092W 441 nt0.07□□□□□ -2.4
RPS11AP0CX47 LSM4YER112W 564 nt0.07□□□□□ -2.4
RPS11AP0CX47 SAY1YGR263C 1275 nt0.07□□□□□ -2.4
RPS11AP0CX47 YBL068W-AYBL068W-A 237 nt0.07□□□□□ -2.4
RPS11AP0CX47 snR24snR24 89 nt0.07□□□□□ -2.4
RPS11AP0CX47 VPS52YDR484W 1926 nt0.07□□□□□ -2.4
RPS11AP0CX47 NGG1YDR176W 2109 nt0.07□□□□□ -2.4
RPS11AP0CX47 PDE2YOR360C 1581 nt0.06□□□□□ -2.4
RPS11AP0CX47 MMS21YEL019C 804 nt0.06□□□□□ -2.4
RPS11AP0CX47 BLS1YLR408C 369 nt0.06□□□□□ -2.4
RPS11AP0CX47 RPS16AYMR143W 432 nt0.06□□□□□ -2.4
RPS11AP0CX47 RUF22RUF22 515 nt0.06□□□□□ -2.4
RPS11AP0CX47 YNL171CYNL171C 369 nt0.06□□□□□ -2.4
RPS11AP0CX47 SLD3YGL113W 2007 nt0.06□□□□□ -2.4
RPS11AP0CX47 SLI15YBR156C 2097 nt0.06□□□□□ -2.4
RPS11AP0CX47 NUP120YKL057C 3114 nt0.05□□□□□ -2.4
RPS11AP0CX47 YCR024C-BYCR024C-B 267 nt0.05□□□□□ -2.4
RPS11AP0CX47 UBC9YDL064W 474 nt0.05□□□□□ -2.4
RPS11AP0CX47 YDR003W-AYDR003W-A 123 nt0.05□□□□□ -2.4
RPS11AP0CX47 YGL258W-AYGL258W-A 234 nt0.05□□□□□ -2.4
RPS11AP0CX47 YIL134C-AYIL134C-A 204 nt0.05□□□□□ -2.4
RPS11AP0CX47 RPL37AYLR185W 267 nt0.05□□□□□ -2.4
RPS11AP0CX47 REF2YDR195W 1602 nt0.05□□□□□ -2.4
RPS11AP0CX47 YER078W-AYER078W-A 165 nt0.04□□□□□ -2.4
RPS11AP0CX47 SBH1YER087C-B 249 nt0.04□□□□□ -2.4
RPS11AP0CX47 ICS2YBR157C 768 nt0.04□□□□□ -2.4
RPS11AP0CX47 BFR2YDR299W 1605 nt0.04□□□□□ -2.4
RPS11AP0CX47 YBL100W-BYBL100W-B 5313 nt0.04□□□□□ -2.4
RPS11AP0CX47 KAR3YPR141C 2190 nt0.04□□□□□ -2.4
RPS11AP0CX47 HDA3YPR179C 1968 nt0.03□□□□□ -2.4
RPS11AP0CX47 YEL030C-AYEL030C-A 315 nt0.03□□□□□ -2.4
RPS11AP0CX47 ISD11YER048W-A 285 nt0.03□□□□□ -2.4
RPS11AP0CX47 IES5YER092W 378 nt0.03□□□□□ -2.4
RPS11AP0CX47 RSM27YGR215W 333 nt0.03□□□□□ -2.4
RPS11AP0CX47 SDH2YLL041C 801 nt0.03□□□□□ -2.4
RPS11AP0CX47 YOL013W-AYOL013W-A 192 nt0.03□□□□□ -2.4
RPS11AP0CX47 YOL118CYOL118C 309 nt0.03□□□□□ -2.4
RPS11AP0CX47 SPR2YOR214C 711 nt0.03□□□□□ -2.4
RPS11AP0CX47 CHS6YJL099W 2241 nt0.03□□□□□ -2.4
RPS11AP0CX47 SCW11YGL028C 1629 nt0.02□□□□□ -2.41
RPS11AP0CX47 YEL010WYEL010W 351 nt0.02□□□□□ -2.41
RPS11AP0CX47 YHL002C-AYHL002C-A 489 nt0.02□□□□□ -2.41
RPS11AP0CX47 YMR321CYMR321C 318 nt0.02□□□□□ -2.41
RPS11AP0CX47 YOP1YPR028W 543 nt0.02□□□□□ -2.41
RPS11AP0CX47 YPR172WYPR172W 603 nt0.02□□□□□ -2.41
RPS11AP0CX47 ZIP1YDR285W 2628 nt0.01□□□□□ -2.41
RPS11AP0CX47 AFR1YDR085C 1863 nt0.01□□□□□ -2.41
RPS11AP0CX47 RPL29YFR032C-A 180 nt0.01□□□□□ -2.41
RPS11AP0CX47 RPL26BYGR034W 384 nt0.01□□□□□ -2.41
RPS11AP0CX47 NUP82YJL061W 2142 nt0.01□□□□□ -2.41
RPS11AP0CX47 WAR1YML076C 2835 nt0□□□□□ -2.41
RPS11AP0CX47 AI5_ALPHAQ0070 1893 nt0□□□□□ -2.41
RPS11AP0CX47 YOR192C-BYOR192C-B 5313 nt0□□□□□ -2.41
RPS11AP0CX47 snR13snR13 124 nt0□□□□□ -2.41
RPS11AP0CX47 ESP1YGR098C 4893 nt-0□□□□□ -2.41
RPS11AP0CX47 ALY2YJL084C 3141 nt-0□□□□□ -2.41
RPS11AP0CX47 MLP2YIL149C 5040 nt-0.01□□□□□ -2.41
RPS11AP0CX47 KAR1YNL188W 1302 nt-0.01□□□□□ -2.41
RPS11AP0CX47 YPR153WYPR153W 423 nt-0.01□□□□□ -2.41
RPS11AP0CX47 SWI5YDR146C 2130 nt-0.01□□□□□ -2.41
RPS11AP0CX47 NPR2YEL062W 1848 nt-0.01□□□□□ -2.41
RPS11AP0CX47 MMS4YBR098W 2076 nt-0.02□□□□□ -2.41
RPS11AP0CX47 YDL068WYDL068W 330 nt-0.02□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 35.5 ms