RNA–Protein interactions for RNA: YCL056C

PEX34, Transcript of Protein that regulates peroxisome populations, yeastyeast

Gene PEX34, Length 435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX34YCL056C MTC1P47018 478 aaKnown RBP19.17■□□□□ 0.66
PEX34YCL056C DRS1P32892 752 aaKnown RBP18.31■□□□□ 0.52
PEX34YCL056C FAP1P53971 965 aa16.85■□□□□ 0.29
PEX34YCL056C PRI1P10363 409 aa15.94■□□□□ 0.14
PEX34YCL056C DIP2Q12220 943 aaPredicted RBP15.91■□□□□ 0.14
PEX34YCL056C ISW2Q08773 1120 aa15.84■□□□□ 0.13
PEX34YCL056C PRY3P47033 881 aa15.8■□□□□ 0.12
PEX34YCL056C AAD16Q02895 342 aa15.8■□□□□ 0.12
PEX34YCL056C RPG1P38249 964 aaKnown RBP15.63■□□□□ 0.09
PEX34YCL056C AVT3P36062 692 aa15.42■□□□□ 0.06
PEX34YCL056C BFR2Q06631 534 aaKnown RBP15.41■□□□□ 0.06
PEX34YCL056C RSE1Q04693 1361 aaKnown RBP15.27■□□□□ 0.04
PEX34YCL056C TSR3Q12094 313 aaKnown RBP15.09■□□□□ 0.01
PEX34YCL056C HAA1Q12753 694 aaKnown RBP14.86□□□□□ -0.03
PEX34YCL056C YCK3P39962 524 aa14.85□□□□□ -0.03
PEX34YCL056C RPL17AP05740 184 aaKnown RBP14.76□□□□□ -0.05
PEX34YCL056C RPL17BP46990 184 aaKnown RBP14.76□□□□□ -0.05
PEX34YCL056C REB1P21538 810 aa14.68□□□□□ -0.06
PEX34YCL056C MRPL32P25348 183 aa14.53□□□□□ -0.08
PEX34YCL056C SPT21P35209 758 aa14.12□□□□□ -0.15
PEX34YCL056C YKR023WP36119 530 aaKnown RBP13.88□□□□□ -0.19
PEX34YCL056C YGL015CP33199 130 aa13.82□□□□□ -0.2
PEX34YCL056C TFA1P36100 482 aa13.82□□□□□ -0.2
PEX34YCL056C CDC27P38042 758 aa13.82□□□□□ -0.2
PEX34YCL056C RIM101P33400 625 aa13.73□□□□□ -0.21
PEX34YCL056C HOP09932 586 aa13.61□□□□□ -0.23
PEX34YCL056C TFC8Q12308 588 aa13.61□□□□□ -0.23
PEX34YCL056C DCD1P06773 312 aa13.53□□□□□ -0.24
PEX34YCL056C UBP10P53874 792 aaPredicted RBP13.42□□□□□ -0.26
PEX34YCL056C MAP2P38174 421 aaKnown RBP13.36□□□□□ -0.27
PEX34YCL056C OXP1P28273 1286 aa13.26□□□□□ -0.29
PEX34YCL056C BCH2P36122 765 aa13.19□□□□□ -0.3
PEX34YCL056C SCY1P53009 804 aa13.18□□□□□ -0.3
PEX34YCL056C YIL055CP40523 627 aaKnown RBP13.14□□□□□ -0.31
PEX34YCL056C PTP3P40048 928 aa13.1□□□□□ -0.31
PEX34YCL056C SLX5P32828 619 aaKnown RBP13□□□□□ -0.33
PEX34YCL056C YAH1Q12184 172 aaKnown RBP12.97□□□□□ -0.33
PEX34YCL056C RSM7P47150 247 aa12.91□□□□□ -0.34
PEX34YCL056C TIF4632P39936 914 aaKnown RBP12.9□□□□□ -0.34
PEX34YCL056C EPS1P40557 701 aa12.89□□□□□ -0.35
PEX34YCL056C BDF1P35817 686 aa12.82□□□□□ -0.36
PEX34YCL056C TGL3P40308 642 aa12.8□□□□□ -0.36
PEX34YCL056C BBC1P47068 1157 aa12.77□□□□□ -0.37
PEX34YCL056C AI2P03876 854 aa12.76□□□□□ -0.37
PEX34YCL056C YLR271WQ06152 274 aa12.75□□□□□ -0.37
PEX34YCL056C SSP1P38871 571 aa12.71□□□□□ -0.37
PEX34YCL056C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.63□□□□□ -0.39not detected
PEX34YCL056C PSD2P53037 1138 aaKnown RBP12.52□□□□□ -0.41
PEX34YCL056C BUD31P25337 157 aaPredicted RBP12.47□□□□□ -0.41
PEX34YCL056C MGA2P40578 1113 aa12.37□□□□□ -0.43
PEX34YCL056C NSR1P27476 414 aaKnown RBP RIP-Chip data12.35□□□□□ -0.43not detected
PEX34YCL056C MRM1P25270 412 aa12.32□□□□□ -0.44
PEX34YCL056C UBP9P39967 754 aa12.32□□□□□ -0.44
PEX34YCL056C YOR238WQ08634 303 aa12.32□□□□□ -0.44
PEX34YCL056C CST9Q06032 482 aa12.31□□□□□ -0.44
PEX34YCL056C MST1P07236 462 aa12.29□□□□□ -0.44
PEX34YCL056C YAP5P40574 245 aa12.29□□□□□ -0.44
PEX34YCL056C RTG3P38165 486 aa12.1□□□□□ -0.47
PEX34YCL056C YBL029C-AQ3E756 94 aa12.04□□□□□ -0.48
PEX34YCL056C VPS29P38759 282 aa12.02□□□□□ -0.49
PEX34YCL056C PIB1Q06651 286 aa12.02□□□□□ -0.49
PEX34YCL056C GTT3P39996 337 aa12.01□□□□□ -0.49
PEX34YCL056C YMR1P47147 688 aaKnown RBP RIP-Chip data12.01□□□□□ -0.49not detected
PEX34YCL056C RCR1P38212 213 aa11.97□□□□□ -0.49
PEX34YCL056C DBP1P24784 617 aaKnown RBP11.94□□□□□ -0.5
PEX34YCL056C WSC3Q12215 556 aa11.94□□□□□ -0.5
PEX34YCL056C SIS1P25294 352 aaKnown RBP11.93□□□□□ -0.5
PEX34YCL056C VNX1P42839 908 aa11.93□□□□□ -0.5
PEX34YCL056C YFR006WP43590 535 aa11.89□□□□□ -0.51
PEX34YCL056C STS1P38637 319 aa11.88□□□□□ -0.51
PEX34YCL056C SPP1Q03012 353 aa11.85□□□□□ -0.51
PEX34YCL056C VMA1P17255 1071 aaKnown RBP11.77□□□□□ -0.53
PEX34YCL056C TIF11P38912 153 aaKnown RBP11.77□□□□□ -0.53
PEX34YCL056C RAM2P29703 316 aa11.73□□□□□ -0.53
PEX34YCL056C MSB4Q12317 492 aa11.72□□□□□ -0.53
PEX34YCL056C YOL036WQ08206 761 aa11.7□□□□□ -0.54
PEX34YCL056C SET4P42948 560 aa11.69□□□□□ -0.54
PEX34YCL056C SAM3Q08986 587 aa11.68□□□□□ -0.54
PEX34YCL056C MAK11P20484 414 aaKnown RBP11.67□□□□□ -0.54
PEX34YCL056C ULI1P43604 169 aa11.67□□□□□ -0.54
PEX34YCL056C EAP1P36041 632 aaKnown RBP11.65□□□□□ -0.54
PEX34YCL056C IOC2Q12072 812 aa11.6□□□□□ -0.55
PEX34YCL056C LDB19Q12502 818 aa11.58□□□□□ -0.56
PEX34YCL056C MIF2P35201 549 aa11.57□□□□□ -0.56
PEX34YCL056C GYP5Q12344 894 aa11.56□□□□□ -0.56
PEX34YCL056C TRP5P00931 707 aaKnown RBP11.54□□□□□ -0.56
PEX34YCL056C ABP1P15891 592 aaKnown RBP11.53□□□□□ -0.56
PEX34YCL056C FKH1P40466 484 aa11.52□□□□□ -0.57
PEX34YCL056C COQ8P27697 501 aa11.5□□□□□ -0.57
PEX34YCL056C AIR2Q12476 344 aaKnown RBP11.49□□□□□ -0.57
PEX34YCL056C EDS1P38073 919 aa11.48□□□□□ -0.57
PEX34YCL056C GRE2Q12068 342 aaKnown RBP11.46□□□□□ -0.57
PEX34YCL056C HTA1P04911 132 aaKnown RBP11.45□□□□□ -0.58
PEX34YCL056C HTA2P04912 132 aa11.45□□□□□ -0.58
PEX34YCL056C PTC3P34221 468 aaKnown RBP11.45□□□□□ -0.58
PEX34YCL056C DCW1P36091 449 aa11.45□□□□□ -0.58
PEX34YCL056C RTG1P32607 177 aa11.43□□□□□ -0.58
PEX34YCL056C YNL035CP53962 389 aaKnown RBP11.42□□□□□ -0.58
PEX34YCL056C YJL171CP46992 396 aa11.41□□□□□ -0.58
PEX34YCL056C ATH1P48016 1211 aa11.4□□□□□ -0.58
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms