RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W MTC1P47018 478 aaKnown RBP15.68■□□□□ 0.1
LSM4YER112W FAP1P53971 965 aa14.47□□□□□ -0.09
LSM4YER112W DRS1P32892 752 aaKnown RBP14.26□□□□□ -0.13
LSM4YER112W PRY3P47033 881 aa13.6□□□□□ -0.23
LSM4YER112W PRI1P10363 409 aa13.41□□□□□ -0.26
LSM4YER112W AAD16Q02895 342 aa13.39□□□□□ -0.27
LSM4YER112W ISW2Q08773 1120 aa13.1□□□□□ -0.31
LSM4YER112W RPG1P38249 964 aaKnown RBP12.92□□□□□ -0.34
LSM4YER112W YCK3P39962 524 aa12.83□□□□□ -0.36
LSM4YER112W HAA1Q12753 694 aaKnown RBP12.81□□□□□ -0.36
LSM4YER112W DIP2Q12220 943 aaPredicted RBP12.64□□□□□ -0.39
LSM4YER112W TSR3Q12094 313 aaKnown RBP12.61□□□□□ -0.39
LSM4YER112W RSE1Q04693 1361 aaKnown RBP12.34□□□□□ -0.43
LSM4YER112W MRPL32P25348 183 aa12.18□□□□□ -0.46
LSM4YER112W AVT3P36062 692 aa12.08□□□□□ -0.48
LSM4YER112W REB1P21538 810 aa11.94□□□□□ -0.5
LSM4YER112W RPL17AP05740 184 aaKnown RBP11.93□□□□□ -0.5
LSM4YER112W RPL17BP46990 184 aaKnown RBP11.93□□□□□ -0.5
LSM4YER112W YGL015CP33199 130 aa11.81□□□□□ -0.52
LSM4YER112W BFR2Q06631 534 aaKnown RBP11.69□□□□□ -0.54
LSM4YER112W CDC27P38042 758 aa11.45□□□□□ -0.58
LSM4YER112W SPT21P35209 758 aa11.41□□□□□ -0.58
LSM4YER112W YKR023WP36119 530 aaKnown RBP11.35□□□□□ -0.59
LSM4YER112W UBP10P53874 792 aaPredicted RBP11.26□□□□□ -0.61
LSM4YER112W MAP2P38174 421 aaKnown RBP11.15□□□□□ -0.62
LSM4YER112W TFC8Q12308 588 aa11.14□□□□□ -0.63
LSM4YER112W HOP09932 586 aa11.09□□□□□ -0.63
LSM4YER112W DCD1P06773 312 aa11.02□□□□□ -0.65
LSM4YER112W RIM101P33400 625 aa10.96□□□□□ -0.65
LSM4YER112W BUD31P25337 157 aaPredicted RBP10.95□□□□□ -0.66
LSM4YER112W SCY1P53009 804 aa10.86□□□□□ -0.67
LSM4YER112W TIF4632P39936 914 aaKnown RBP10.81□□□□□ -0.68
LSM4YER112W SLX5P32828 619 aaKnown RBP10.78□□□□□ -0.68
LSM4YER112W TGL3P40308 642 aa10.76□□□□□ -0.69
LSM4YER112W BCH2P36122 765 aa10.75□□□□□ -0.69
LSM4YER112W UBP9P39967 754 aa10.56□□□□□ -0.72
LSM4YER112W OXP1P28273 1286 aa10.54□□□□□ -0.72
LSM4YER112W EPS1P40557 701 aa10.46□□□□□ -0.73
LSM4YER112W BDF1P35817 686 aa10.43□□□□□ -0.74
LSM4YER112W YIL055CP40523 627 aaKnown RBP10.43□□□□□ -0.74
LSM4YER112W PTP3P40048 928 aa10.41□□□□□ -0.74
LSM4YER112W SIS1P25294 352 aaKnown RBP10.39□□□□□ -0.75
LSM4YER112W MST1P07236 462 aa10.28□□□□□ -0.76
LSM4YER112W RSM7P47150 247 aa10.27□□□□□ -0.77
LSM4YER112W BBC1P47068 1157 aa10.26□□□□□ -0.77
LSM4YER112W NSR1P27476 414 aaKnown RBP RIP-Chip data10.22□□□□□ -0.77not detected
LSM4YER112W TFA1P36100 482 aa10.22□□□□□ -0.77
LSM4YER112W YOR238WQ08634 303 aa10.21□□□□□ -0.77
LSM4YER112W AI2P03876 854 aa10.19□□□□□ -0.78
LSM4YER112W YAH1Q12184 172 aaKnown RBP10.15□□□□□ -0.78
LSM4YER112W YAP5P40574 245 aa10.1□□□□□ -0.79
LSM4YER112W YBL029C-AQ3E756 94 aa10.1□□□□□ -0.79
LSM4YER112W VNX1P42839 908 aa10.02□□□□□ -0.81
LSM4YER112W YLR271WQ06152 274 aa10.01□□□□□ -0.81
LSM4YER112W PSD2P53037 1138 aaKnown RBP9.92□□□□□ -0.82
LSM4YER112W SPP1Q03012 353 aa9.92□□□□□ -0.82
LSM4YER112W WSC3Q12215 556 aa9.89□□□□□ -0.83
LSM4YER112W GTT3P39996 337 aa9.87□□□□□ -0.83
LSM4YER112W SSP1P38871 571 aa9.82□□□□□ -0.84
LSM4YER112W TIF11P38912 153 aaKnown RBP9.82□□□□□ -0.84
LSM4YER112W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.82□□□□□ -0.84not detected
LSM4YER112W MRM1P25270 412 aa9.79□□□□□ -0.84
LSM4YER112W AIR2Q12476 344 aaKnown RBP9.73□□□□□ -0.85
LSM4YER112W FKH1P40466 484 aa9.72□□□□□ -0.85
LSM4YER112W PIB1Q06651 286 aa9.71□□□□□ -0.86
LSM4YER112W YJL171CP46992 396 aa9.69□□□□□ -0.86
LSM4YER112W ULI1P43604 169 aa9.67□□□□□ -0.86
LSM4YER112W MSB4Q12317 492 aa9.67□□□□□ -0.86
LSM4YER112W LDB19Q12502 818 aa9.66□□□□□ -0.86
LSM4YER112W IOC2Q12072 812 aa9.65□□□□□ -0.86
LSM4YER112W MGA2P40578 1113 aa9.64□□□□□ -0.87
LSM4YER112W YMR1P47147 688 aaKnown RBP RIP-Chip data9.63□□□□□ -0.87not detected
LSM4YER112W EAP1P36041 632 aaKnown RBP9.62□□□□□ -0.87
LSM4YER112W RTG3P38165 486 aa9.61□□□□□ -0.87
LSM4YER112W CST9Q06032 482 aa9.61□□□□□ -0.87
LSM4YER112W VPS29P38759 282 aa9.6□□□□□ -0.87
LSM4YER112W DBP1P24784 617 aaKnown RBP9.57□□□□□ -0.88
LSM4YER112W YOL036WQ08206 761 aa9.55□□□□□ -0.88
LSM4YER112W BMT6Q12291 365 aa9.54□□□□□ -0.88
LSM4YER112W SET4P42948 560 aa9.52□□□□□ -0.89
LSM4YER112W VMA1P17255 1071 aaKnown RBP9.5□□□□□ -0.89
LSM4YER112W STS1P38637 319 aa9.49□□□□□ -0.89
LSM4YER112W YFR006WP43590 535 aa9.49□□□□□ -0.89
LSM4YER112W TRP5P00931 707 aaKnown RBP9.48□□□□□ -0.89
LSM4YER112W SAM3Q08986 587 aa9.48□□□□□ -0.89
LSM4YER112W RTG1P32607 177 aa9.46□□□□□ -0.9
LSM4YER112W SEC61P32915 480 aa9.43□□□□□ -0.9
LSM4YER112W YNL035CP53962 389 aaKnown RBP9.43□□□□□ -0.9
LSM4YER112W NCR1Q12200 1170 aa9.43□□□□□ -0.9
LSM4YER112W RCR1P38212 213 aa9.41□□□□□ -0.9
LSM4YER112W ABP1P15891 592 aaKnown RBP9.38□□□□□ -0.91
LSM4YER112W JIP4Q03361 876 aa9.33□□□□□ -0.92
LSM4YER112W TFG1P41895 735 aaPredicted RBP9.32□□□□□ -0.92
LSM4YER112W GYP5Q12344 894 aa9.32□□□□□ -0.92
LSM4YER112W DAN4P47179 1161 aa9.28□□□□□ -0.92
LSM4YER112W HTA1P04911 132 aaKnown RBP9.27□□□□□ -0.93
LSM4YER112W HTA2P04912 132 aa9.27□□□□□ -0.93
LSM4YER112W PTC4P38089 393 aa9.22□□□□□ -0.93
LSM4YER112W DCW1P36091 449 aa9.21□□□□□ -0.94
LSM4YER112W YDL129WQ07555 291 aa9.21□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms