RNA–Protein interactions for RNA: YDR085C

AFR1, Transcript of Protein required for pheromone-induced projection (shmoo) formation, yeastyeast

Gene AFR1, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFR1YDR085C MTC1P47018 478 aaKnown RBP11.8□□□□□ -0.52
AFR1YDR085C DRS1P32892 752 aaKnown RBP11.46□□□□□ -0.58
AFR1YDR085C FAP1P53971 965 aa10.07□□□□□ -0.8
AFR1YDR085C DIP2Q12220 943 aaPredicted RBP9.89□□□□□ -0.83
AFR1YDR085C BFR2Q06631 534 aaKnown RBP9.74□□□□□ -0.85
AFR1YDR085C PRI1P10363 409 aa9.69□□□□□ -0.86
AFR1YDR085C AVT3P36062 692 aa9.68□□□□□ -0.86
AFR1YDR085C ISW2Q08773 1120 aa9.66□□□□□ -0.86
AFR1YDR085C RPG1P38249 964 aaKnown RBP9.55□□□□□ -0.88
AFR1YDR085C AAD16Q02895 342 aa9.55□□□□□ -0.88
AFR1YDR085C PRY3P47033 881 aa9.45□□□□□ -0.9
AFR1YDR085C RSE1Q04693 1361 aaKnown RBP9.43□□□□□ -0.9
AFR1YDR085C TSR3Q12094 313 aaKnown RBP9.17□□□□□ -0.94
AFR1YDR085C RPL17AP05740 184 aaKnown RBP9.1□□□□□ -0.95
AFR1YDR085C RPL17BP46990 184 aaKnown RBP9.1□□□□□ -0.95
AFR1YDR085C REB1P21538 810 aa9.01□□□□□ -0.97
AFR1YDR085C YCK3P39962 524 aa8.98□□□□□ -0.97
AFR1YDR085C TFA1P36100 482 aa8.93□□□□□ -0.98
AFR1YDR085C HAA1Q12753 694 aaKnown RBP8.89□□□□□ -0.99
AFR1YDR085C MRPL32P25348 183 aa8.81□□□□□ -1
AFR1YDR085C SPT21P35209 758 aa8.76□□□□□ -1.01
AFR1YDR085C RIM101P33400 625 aa8.56□□□□□ -1.04
AFR1YDR085C YKR023WP36119 530 aaKnown RBP8.56□□□□□ -1.04
AFR1YDR085C CDC27P38042 758 aa8.47□□□□□ -1.05
AFR1YDR085C TFC8Q12308 588 aa8.38□□□□□ -1.07
AFR1YDR085C HOP09932 586 aa8.37□□□□□ -1.07
AFR1YDR085C YGL015CP33199 130 aa8.32□□□□□ -1.08
AFR1YDR085C DCD1P06773 312 aa8.32□□□□□ -1.08
AFR1YDR085C OXP1P28273 1286 aa8.29□□□□□ -1.08
AFR1YDR085C UBP10P53874 792 aaPredicted RBP8.16□□□□□ -1.1
AFR1YDR085C MAP2P38174 421 aaKnown RBP8.15□□□□□ -1.11
AFR1YDR085C YIL055CP40523 627 aaKnown RBP8.14□□□□□ -1.11
AFR1YDR085C BCH2P36122 765 aa8.13□□□□□ -1.11
AFR1YDR085C PTP3P40048 928 aa8.11□□□□□ -1.11
AFR1YDR085C YAH1Q12184 172 aaKnown RBP8.08□□□□□ -1.12
AFR1YDR085C SCY1P53009 804 aa8.05□□□□□ -1.12
AFR1YDR085C RSM7P47150 247 aa8.03□□□□□ -1.12
AFR1YDR085C SSP1P38871 571 aa8□□□□□ -1.13
AFR1YDR085C YLR271WQ06152 274 aa7.98□□□□□ -1.13
AFR1YDR085C EPS1P40557 701 aa7.95□□□□□ -1.14
AFR1YDR085C SLX5P32828 619 aaKnown RBP7.93□□□□□ -1.14
AFR1YDR085C AI2P03876 854 aa7.92□□□□□ -1.14
AFR1YDR085C BDF1P35817 686 aa7.91□□□□□ -1.14
AFR1YDR085C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
AFR1YDR085C BBC1P47068 1157 aa7.88□□□□□ -1.15
AFR1YDR085C PSD2P53037 1138 aaKnown RBP7.82□□□□□ -1.16
AFR1YDR085C TIF4632P39936 914 aaKnown RBP7.81□□□□□ -1.16
AFR1YDR085C TGL3P40308 642 aa7.78□□□□□ -1.16
AFR1YDR085C MGA2P40578 1113 aa7.75□□□□□ -1.17
AFR1YDR085C CST9Q06032 482 aa7.72□□□□□ -1.17
AFR1YDR085C MRM1P25270 412 aa7.66□□□□□ -1.18
AFR1YDR085C NSR1P27476 414 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2not detected
AFR1YDR085C RTG3P38165 486 aa7.53□□□□□ -1.2
AFR1YDR085C MST1P07236 462 aa7.52□□□□□ -1.21
AFR1YDR085C YAP5P40574 245 aa7.52□□□□□ -1.21
AFR1YDR085C YOR238WQ08634 303 aa7.51□□□□□ -1.21
AFR1YDR085C RCR1P38212 213 aa7.5□□□□□ -1.21
AFR1YDR085C VPS29P38759 282 aa7.49□□□□□ -1.21
AFR1YDR085C YMR1P47147 688 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
AFR1YDR085C BUD31P25337 157 aaPredicted RBP7.43□□□□□ -1.22
AFR1YDR085C DBP1P24784 617 aaKnown RBP7.4□□□□□ -1.23
AFR1YDR085C RAM2P29703 316 aa7.4□□□□□ -1.23
AFR1YDR085C PIB1Q06651 286 aa7.4□□□□□ -1.23
AFR1YDR085C STS1P38637 319 aa7.39□□□□□ -1.23
AFR1YDR085C UBP9P39967 754 aa7.38□□□□□ -1.23
AFR1YDR085C YFR006WP43590 535 aa7.37□□□□□ -1.23
AFR1YDR085C GTT3P39996 337 aa7.32□□□□□ -1.24
AFR1YDR085C MAK11P20484 414 aaKnown RBP7.32□□□□□ -1.24
AFR1YDR085C YBL029C-AQ3E756 94 aa7.31□□□□□ -1.24
AFR1YDR085C VMA1P17255 1071 aaKnown RBP7.28□□□□□ -1.24
AFR1YDR085C VNX1P42839 908 aa7.26□□□□□ -1.25
AFR1YDR085C WSC3Q12215 556 aa7.26□□□□□ -1.25
AFR1YDR085C SAM3Q08986 587 aa7.24□□□□□ -1.25
AFR1YDR085C COQ8P27697 501 aa7.21□□□□□ -1.25
AFR1YDR085C MIF2P35201 549 aa7.21□□□□□ -1.26
AFR1YDR085C EDS1P38073 919 aa7.2□□□□□ -1.26
AFR1YDR085C DMA1P38823 416 aa7.2□□□□□ -1.26
AFR1YDR085C YOL036WQ08206 761 aa7.2□□□□□ -1.26
AFR1YDR085C MSB4Q12317 492 aa7.19□□□□□ -1.26
AFR1YDR085C SPP1Q03012 353 aa7.18□□□□□ -1.26
AFR1YDR085C SET4P42948 560 aa7.17□□□□□ -1.26
AFR1YDR085C TIF11P38912 153 aaKnown RBP7.17□□□□□ -1.26
AFR1YDR085C PTC3P34221 468 aaKnown RBP7.15□□□□□ -1.26
AFR1YDR085C SET1P38827 1080 aaKnown RBP7.15□□□□□ -1.27
AFR1YDR085C GYP5Q12344 894 aa7.14□□□□□ -1.27
AFR1YDR085C NOP53Q12080 455 aaKnown RBP7.13□□□□□ -1.27
AFR1YDR085C EAP1P36041 632 aaKnown RBP7.12□□□□□ -1.27
AFR1YDR085C ULI1P43604 169 aa7.12□□□□□ -1.27
AFR1YDR085C RQC2Q12532 1038 aaKnown RBP7.12□□□□□ -1.27
AFR1YDR085C IOC2Q12072 812 aa7.11□□□□□ -1.27
AFR1YDR085C ABP1P15891 592 aaKnown RBP7.1□□□□□ -1.27
AFR1YDR085C SIS1P25294 352 aaKnown RBP7.1□□□□□ -1.27
AFR1YDR085C GRE2Q12068 342 aaKnown RBP7.1□□□□□ -1.27
AFR1YDR085C TRP5P00931 707 aaKnown RBP7.08□□□□□ -1.28
AFR1YDR085C GUT1P32190 709 aa7.07□□□□□ -1.28
AFR1YDR085C DCW1P36091 449 aa7.07□□□□□ -1.28
AFR1YDR085C ATH1P48016 1211 aa7.07□□□□□ -1.28
AFR1YDR085C HTA1P04911 132 aaKnown RBP7.06□□□□□ -1.28
AFR1YDR085C HTA2P04912 132 aa7.06□□□□□ -1.28
AFR1YDR085C LDB19Q12502 818 aa7.05□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms