RNA–Protein interactions for RNA: YHR148W

IMP3, Transcript of Component of the SSU processome, yeastyeast

Gene IMP3, Length 552 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IMP3YHR148W DRS1P32892 752 aaKnown RBP14.98□□□□□ -0.01
IMP3YHR148W MTC1P47018 478 aaKnown RBP14.98□□□□□ -0.01
IMP3YHR148W FAP1P53971 965 aa13.32□□□□□ -0.28
IMP3YHR148W BFR2Q06631 534 aaKnown RBP12.93□□□□□ -0.34
IMP3YHR148W DIP2Q12220 943 aaPredicted RBP12.77□□□□□ -0.37
IMP3YHR148W AVT3P36062 692 aa12.61□□□□□ -0.39
IMP3YHR148W PRY3P47033 881 aa12.51□□□□□ -0.41
IMP3YHR148W PRI1P10363 409 aa12.4□□□□□ -0.42
IMP3YHR148W AAD16Q02895 342 aa12.33□□□□□ -0.44
IMP3YHR148W ISW2Q08773 1120 aa12.15□□□□□ -0.46
IMP3YHR148W TFA1P36100 482 aa12.13□□□□□ -0.47
IMP3YHR148W RSE1Q04693 1361 aaKnown RBP12.05□□□□□ -0.48
IMP3YHR148W RPG1P38249 964 aaKnown RBP12.04□□□□□ -0.48
IMP3YHR148W YCK3P39962 524 aa11.79□□□□□ -0.52
IMP3YHR148W HAA1Q12753 694 aaKnown RBP11.72□□□□□ -0.53
IMP3YHR148W TSR3Q12094 313 aaKnown RBP11.71□□□□□ -0.53
IMP3YHR148W RPL17AP05740 184 aaKnown RBP11.63□□□□□ -0.55
IMP3YHR148W RPL17BP46990 184 aaKnown RBP11.63□□□□□ -0.55
IMP3YHR148W REB1P21538 810 aa11.45□□□□□ -0.58
IMP3YHR148W MRPL32P25348 183 aa11.26□□□□□ -0.61
IMP3YHR148W SPT21P35209 758 aa11.23□□□□□ -0.61
IMP3YHR148W RIM101P33400 625 aa11.04□□□□□ -0.64
IMP3YHR148W YKR023WP36119 530 aaKnown RBP10.88□□□□□ -0.67
IMP3YHR148W YGL015CP33199 130 aa10.82□□□□□ -0.68
IMP3YHR148W OXP1P28273 1286 aa10.74□□□□□ -0.69
IMP3YHR148W CDC27P38042 758 aa10.67□□□□□ -0.7
IMP3YHR148W HOP09932 586 aa10.65□□□□□ -0.7
IMP3YHR148W TFC8Q12308 588 aa10.64□□□□□ -0.71
IMP3YHR148W PTP3P40048 928 aa10.62□□□□□ -0.71
IMP3YHR148W DCD1P06773 312 aa10.59□□□□□ -0.71
IMP3YHR148W YAH1Q12184 172 aaKnown RBP10.53□□□□□ -0.72
IMP3YHR148W SSP1P38871 571 aa10.5□□□□□ -0.73
IMP3YHR148W YIL055CP40523 627 aaKnown RBP10.49□□□□□ -0.73
IMP3YHR148W UBP10P53874 792 aaPredicted RBP10.4□□□□□ -0.74
IMP3YHR148W YLR271WQ06152 274 aa10.4□□□□□ -0.74
IMP3YHR148W MAP2P38174 421 aaKnown RBP10.36□□□□□ -0.75
IMP3YHR148W RSM7P47150 247 aa10.36□□□□□ -0.75
IMP3YHR148W BCH2P36122 765 aa10.33□□□□□ -0.76
IMP3YHR148W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.3□□□□□ -0.76not detected
IMP3YHR148W AI2P03876 854 aa10.2□□□□□ -0.78
IMP3YHR148W SCY1P53009 804 aa10.17□□□□□ -0.78
IMP3YHR148W EPS1P40557 701 aa10.15□□□□□ -0.78
IMP3YHR148W MGA2P40578 1113 aa10.13□□□□□ -0.79
IMP3YHR148W PSD2P53037 1138 aaKnown RBP10.13□□□□□ -0.79
IMP3YHR148W CST9Q06032 482 aa10.1□□□□□ -0.79
IMP3YHR148W BBC1P47068 1157 aa10.09□□□□□ -0.79
IMP3YHR148W RQC2Q12532 1038 aaKnown RBP10.08□□□□□ -0.8
IMP3YHR148W BDF1P35817 686 aa10.07□□□□□ -0.8
IMP3YHR148W SLX5P32828 619 aaKnown RBP10.01□□□□□ -0.81
IMP3YHR148W DMA1P38823 416 aa9.98□□□□□ -0.81
IMP3YHR148W BUD31P25337 157 aaPredicted RBP9.97□□□□□ -0.81
IMP3YHR148W TIF4632P39936 914 aaKnown RBP9.97□□□□□ -0.81
IMP3YHR148W TGL3P40308 642 aa9.9□□□□□ -0.82
IMP3YHR148W MRM1P25270 412 aa9.89□□□□□ -0.83
IMP3YHR148W RCR1P38212 213 aa9.78□□□□□ -0.84
IMP3YHR148W RAM2P29703 316 aa9.72□□□□□ -0.85
IMP3YHR148W RTG3P38165 486 aa9.72□□□□□ -0.85
IMP3YHR148W VPS29P38759 282 aa9.67□□□□□ -0.86
IMP3YHR148W UBP9P39967 754 aa9.65□□□□□ -0.86
IMP3YHR148W NSR1P27476 414 aaKnown RBP RIP-Chip data9.56□□□□□ -0.88not detected
IMP3YHR148W YMR1P47147 688 aaKnown RBP RIP-Chip data9.55□□□□□ -0.88not detected
IMP3YHR148W MAK11P20484 414 aaKnown RBP9.54□□□□□ -0.88
IMP3YHR148W STS1P38637 319 aa9.54□□□□□ -0.88
IMP3YHR148W YOR238WQ08634 303 aa9.52□□□□□ -0.89
IMP3YHR148W DBP1P24784 617 aaKnown RBP9.5□□□□□ -0.89
IMP3YHR148W YAP5P40574 245 aa9.5□□□□□ -0.89
IMP3YHR148W YFR006WP43590 535 aa9.5□□□□□ -0.89
IMP3YHR148W SIS1P25294 352 aaKnown RBP9.49□□□□□ -0.89
IMP3YHR148W MST1P07236 462 aa9.47□□□□□ -0.89
IMP3YHR148W PIB1Q06651 286 aa9.47□□□□□ -0.89
IMP3YHR148W SET1P38827 1080 aaKnown RBP9.46□□□□□ -0.9
IMP3YHR148W SAS10Q12136 610 aaPredicted RBP9.46□□□□□ -0.9
IMP3YHR148W COQ8P27697 501 aa9.41□□□□□ -0.9
IMP3YHR148W EDS1P38073 919 aa9.39□□□□□ -0.91
IMP3YHR148W MIF2P35201 549 aa9.36□□□□□ -0.91
IMP3YHR148W YBL029C-AQ3E756 94 aa9.36□□□□□ -0.91
IMP3YHR148W VMA1P17255 1071 aaKnown RBP9.33□□□□□ -0.92
IMP3YHR148W YPR148CQ06523 435 aa9.32□□□□□ -0.92
IMP3YHR148W NOP53Q12080 455 aaKnown RBP9.28□□□□□ -0.92
IMP3YHR148W PTC3P34221 468 aaKnown RBP9.27□□□□□ -0.93
IMP3YHR148W IFH1P39520 1085 aa9.26□□□□□ -0.93
IMP3YHR148W VPS70P47161 811 aa9.26□□□□□ -0.93
IMP3YHR148W VNX1P42839 908 aa9.25□□□□□ -0.93
IMP3YHR148W GTT3P39996 337 aa9.24□□□□□ -0.93
IMP3YHR148W SAM3Q08986 587 aa9.23□□□□□ -0.93
IMP3YHR148W WSC3Q12215 556 aa9.2□□□□□ -0.94
IMP3YHR148W SPP1Q03012 353 aa9.17□□□□□ -0.94
IMP3YHR148W YOL036WQ08206 761 aa9.16□□□□□ -0.94
IMP3YHR148W CKB1P43639 278 aa9.15□□□□□ -0.94
IMP3YHR148W GRE2Q12068 342 aaKnown RBP9.15□□□□□ -0.94
IMP3YHR148W GYP5Q12344 894 aa9.14□□□□□ -0.95
IMP3YHR148W ATH1P48016 1211 aa9.13□□□□□ -0.95
IMP3YHR148W SET4P42948 560 aa9.12□□□□□ -0.95
IMP3YHR148W GUT1P32190 709 aa9.1□□□□□ -0.95
IMP3YHR148W LEU3P08638 886 aa9.09□□□□□ -0.95
IMP3YHR148W TIF11P38912 153 aaKnown RBP9.09□□□□□ -0.95
IMP3YHR148W MSB4Q12317 492 aa9.07□□□□□ -0.96
IMP3YHR148W SPB4P25808 606 aaPredicted RBP9.06□□□□□ -0.96
IMP3YHR148W DCW1P36091 449 aa9.06□□□□□ -0.96
IMP3YHR148W REF2P42073 533 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms