RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeastyeast

Gene UBC7, Length 498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC7YMR022W MTC1P47018 478 aaKnown RBP10.59□□□□□ -0.71
UBC7YMR022W DRS1P32892 752 aaKnown RBP10.08□□□□□ -0.8
UBC7YMR022W FAP1P53971 965 aa9.53□□□□□ -0.88
UBC7YMR022W PRY3P47033 881 aa8.89□□□□□ -0.99
UBC7YMR022W ISW2Q08773 1120 aa8.88□□□□□ -0.99
UBC7YMR022W PRI1P10363 409 aa8.85□□□□□ -0.99
UBC7YMR022W AAD16Q02895 342 aa8.83□□□□□ -1
UBC7YMR022W DIP2Q12220 943 aaPredicted RBP8.77□□□□□ -1.01
UBC7YMR022W RPG1P38249 964 aaKnown RBP8.69□□□□□ -1.02
UBC7YMR022W RSE1Q04693 1361 aaKnown RBP8.48□□□□□ -1.05
UBC7YMR022W BFR2Q06631 534 aaKnown RBP8.47□□□□□ -1.05
UBC7YMR022W AVT3P36062 692 aa8.4□□□□□ -1.06
UBC7YMR022W HAA1Q12753 694 aaKnown RBP8.38□□□□□ -1.07
UBC7YMR022W TSR3Q12094 313 aaKnown RBP8.36□□□□□ -1.07
UBC7YMR022W REB1P21538 810 aa8.22□□□□□ -1.09
UBC7YMR022W RPL17AP05740 184 aaKnown RBP8.17□□□□□ -1.1
UBC7YMR022W RPL17BP46990 184 aaKnown RBP8.17□□□□□ -1.1
UBC7YMR022W MRPL32P25348 183 aa8.16□□□□□ -1.1
UBC7YMR022W YCK3P39962 524 aa8.08□□□□□ -1.12
UBC7YMR022W YGL015CP33199 130 aa7.8□□□□□ -1.16
UBC7YMR022W SPT21P35209 758 aa7.7□□□□□ -1.18
UBC7YMR022W YKR023WP36119 530 aaKnown RBP7.6□□□□□ -1.19
UBC7YMR022W CDC27P38042 758 aa7.58□□□□□ -1.2
UBC7YMR022W TFA1P36100 482 aa7.53□□□□□ -1.2
UBC7YMR022W RIM101P33400 625 aa7.51□□□□□ -1.21
UBC7YMR022W HOP09932 586 aa7.5□□□□□ -1.21
UBC7YMR022W TFC8Q12308 588 aa7.5□□□□□ -1.21
UBC7YMR022W UBP10P53874 792 aaPredicted RBP7.49□□□□□ -1.21
UBC7YMR022W DCD1P06773 312 aa7.42□□□□□ -1.22
UBC7YMR022W MAP2P38174 421 aaKnown RBP7.39□□□□□ -1.23
UBC7YMR022W YIL055CP40523 627 aaKnown RBP7.35□□□□□ -1.23
UBC7YMR022W SCY1P53009 804 aa7.31□□□□□ -1.24
UBC7YMR022W TIF4632P39936 914 aaKnown RBP7.3□□□□□ -1.24
UBC7YMR022W PTP3P40048 928 aa7.3□□□□□ -1.24
UBC7YMR022W SLX5P32828 619 aaKnown RBP7.27□□□□□ -1.25
UBC7YMR022W BCH2P36122 765 aa7.25□□□□□ -1.25
UBC7YMR022W OXP1P28273 1286 aa7.2□□□□□ -1.26
UBC7YMR022W TGL3P40308 642 aa7.16□□□□□ -1.26
UBC7YMR022W BBC1P47068 1157 aa7.16□□□□□ -1.26
UBC7YMR022W YAH1Q12184 172 aaKnown RBP7.14□□□□□ -1.27
UBC7YMR022W RSM7P47150 247 aa7.12□□□□□ -1.27
UBC7YMR022W EPS1P40557 701 aa7.11□□□□□ -1.27
UBC7YMR022W BDF1P35817 686 aa7.06□□□□□ -1.28
UBC7YMR022W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28not detected
UBC7YMR022W AI2P03876 854 aa7.04□□□□□ -1.28
UBC7YMR022W UBP9P39967 754 aa7.03□□□□□ -1.28
UBC7YMR022W BUD31P25337 157 aaPredicted RBP7□□□□□ -1.29
UBC7YMR022W SSP1P38871 571 aa6.98□□□□□ -1.29
UBC7YMR022W YLR271WQ06152 274 aa6.94□□□□□ -1.3
UBC7YMR022W YOR238WQ08634 303 aa6.9□□□□□ -1.3
UBC7YMR022W YAP5P40574 245 aa6.87□□□□□ -1.31
UBC7YMR022W NSR1P27476 414 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
UBC7YMR022W PSD2P53037 1138 aaKnown RBP6.83□□□□□ -1.32
UBC7YMR022W MGA2P40578 1113 aa6.82□□□□□ -1.32
UBC7YMR022W MST1P07236 462 aa6.79□□□□□ -1.32
UBC7YMR022W MRM1P25270 412 aa6.79□□□□□ -1.32
UBC7YMR022W SIS1P25294 352 aaKnown RBP6.79□□□□□ -1.32
UBC7YMR022W GTT3P39996 337 aa6.79□□□□□ -1.32
UBC7YMR022W RTG3P38165 486 aa6.71□□□□□ -1.34
UBC7YMR022W YBL029C-AQ3E756 94 aa6.7□□□□□ -1.34
UBC7YMR022W CST9Q06032 482 aa6.69□□□□□ -1.34
UBC7YMR022W WSC3Q12215 556 aa6.68□□□□□ -1.34
UBC7YMR022W YMR1P47147 688 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
UBC7YMR022W SPP1Q03012 353 aa6.66□□□□□ -1.34
UBC7YMR022W VNX1P42839 908 aa6.64□□□□□ -1.35
UBC7YMR022W PIB1Q06651 286 aa6.63□□□□□ -1.35
UBC7YMR022W DBP1P24784 617 aaKnown RBP6.59□□□□□ -1.35
UBC7YMR022W TIF11P38912 153 aaKnown RBP6.59□□□□□ -1.35
UBC7YMR022W EAP1P36041 632 aaKnown RBP6.57□□□□□ -1.36
UBC7YMR022W MSB4Q12317 492 aa6.57□□□□□ -1.36
UBC7YMR022W VPS29P38759 282 aa6.55□□□□□ -1.36
UBC7YMR022W YFR006WP43590 535 aa6.54□□□□□ -1.36
UBC7YMR022W ULI1P43604 169 aa6.53□□□□□ -1.36
UBC7YMR022W YJL171CP46992 396 aa6.52□□□□□ -1.37
UBC7YMR022W VMA1P17255 1071 aaKnown RBP6.49□□□□□ -1.37
UBC7YMR022W RCR1P38212 213 aa6.49□□□□□ -1.37
UBC7YMR022W STS1P38637 319 aa6.49□□□□□ -1.37
UBC7YMR022W SET4P42948 560 aa6.49□□□□□ -1.37
UBC7YMR022W ABP1P15891 592 aaKnown RBP6.48□□□□□ -1.37
UBC7YMR022W YOL036WQ08206 761 aa6.48□□□□□ -1.37
UBC7YMR022W LDB19Q12502 818 aa6.47□□□□□ -1.37
UBC7YMR022W TFG1P41895 735 aaPredicted RBP6.45□□□□□ -1.38
UBC7YMR022W SAM3Q08986 587 aa6.43□□□□□ -1.38
UBC7YMR022W GYP5Q12344 894 aa6.43□□□□□ -1.38
UBC7YMR022W MAK11P20484 414 aaKnown RBP6.42□□□□□ -1.38
UBC7YMR022W MIF2P35201 549 aa6.41□□□□□ -1.38
UBC7YMR022W TRP5P00931 707 aaKnown RBP6.4□□□□□ -1.38
UBC7YMR022W HTA1P04911 132 aaKnown RBP6.4□□□□□ -1.38
UBC7YMR022W HTA2P04912 132 aa6.4□□□□□ -1.38
UBC7YMR022W FKH1P40466 484 aa6.4□□□□□ -1.38
UBC7YMR022W IOC2Q12072 812 aa6.4□□□□□ -1.38
UBC7YMR022W RTG1P32607 177 aa6.38□□□□□ -1.39
UBC7YMR022W YNL035CP53962 389 aaKnown RBP6.38□□□□□ -1.39
UBC7YMR022W BMT6Q12291 365 aa6.38□□□□□ -1.39
UBC7YMR022W SEC61P32915 480 aa6.37□□□□□ -1.39
UBC7YMR022W JIP4Q03361 876 aa6.37□□□□□ -1.39
UBC7YMR022W GRE2Q12068 342 aaKnown RBP6.37□□□□□ -1.39
UBC7YMR022W NCR1Q12200 1170 aa6.37□□□□□ -1.39
UBC7YMR022W AIR2Q12476 344 aaKnown RBP6.37□□□□□ -1.39
UBC7YMR022W ATH1P48016 1211 aa6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms