RNA–Protein interactions for RNA: YDR195W

REF2, Transcript of RNA-binding protein, yeastyeast

Gene REF2, Length 1,602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
REF2YDR195W MTC1P47018 478 aaKnown RBP14.28□□□□□ -0.12
REF2YDR195W DRS1P32892 752 aaKnown RBP13.68□□□□□ -0.22
REF2YDR195W FAP1P53971 965 aa12.36□□□□□ -0.43
REF2YDR195W DIP2Q12220 943 aaPredicted RBP11.86□□□□□ -0.51
REF2YDR195W PRI1P10363 409 aa11.82□□□□□ -0.52
REF2YDR195W ISW2Q08773 1120 aa11.76□□□□□ -0.53
REF2YDR195W AAD16Q02895 342 aa11.71□□□□□ -0.54
REF2YDR195W PRY3P47033 881 aa11.6□□□□□ -0.55
REF2YDR195W RPG1P38249 964 aaKnown RBP11.59□□□□□ -0.55
REF2YDR195W AVT3P36062 692 aa11.56□□□□□ -0.56
REF2YDR195W BFR2Q06631 534 aaKnown RBP11.56□□□□□ -0.56
REF2YDR195W RSE1Q04693 1361 aaKnown RBP11.39□□□□□ -0.59
REF2YDR195W TSR3Q12094 313 aaKnown RBP11.15□□□□□ -0.62
REF2YDR195W YCK3P39962 524 aa10.98□□□□□ -0.65
REF2YDR195W RPL17AP05740 184 aaKnown RBP10.97□□□□□ -0.65
REF2YDR195W RPL17BP46990 184 aaKnown RBP10.97□□□□□ -0.65
REF2YDR195W HAA1Q12753 694 aaKnown RBP10.97□□□□□ -0.65
REF2YDR195W REB1P21538 810 aa10.89□□□□□ -0.67
REF2YDR195W MRPL32P25348 183 aa10.76□□□□□ -0.69
REF2YDR195W SPT21P35209 758 aa10.56□□□□□ -0.72
REF2YDR195W TFA1P36100 482 aa10.49□□□□□ -0.73
REF2YDR195W YKR023WP36119 530 aaKnown RBP10.33□□□□□ -0.76
REF2YDR195W RIM101P33400 625 aa10.28□□□□□ -0.76
REF2YDR195W CDC27P38042 758 aa10.26□□□□□ -0.77
REF2YDR195W YGL015CP33199 130 aa10.22□□□□□ -0.77
REF2YDR195W TFC8Q12308 588 aa10.14□□□□□ -0.79
REF2YDR195W HOP09932 586 aa10.09□□□□□ -0.79
REF2YDR195W DCD1P06773 312 aa10.01□□□□□ -0.81
REF2YDR195W UBP10P53874 792 aaPredicted RBP9.98□□□□□ -0.81
REF2YDR195W OXP1P28273 1286 aa9.92□□□□□ -0.82
REF2YDR195W MAP2P38174 421 aaKnown RBP9.9□□□□□ -0.82
REF2YDR195W BCH2P36122 765 aa9.81□□□□□ -0.84
REF2YDR195W YIL055CP40523 627 aaKnown RBP9.78□□□□□ -0.84
REF2YDR195W SCY1P53009 804 aa9.77□□□□□ -0.85
REF2YDR195W PTP3P40048 928 aa9.74□□□□□ -0.85
REF2YDR195W SLX5P32828 619 aaKnown RBP9.65□□□□□ -0.86
REF2YDR195W RSM7P47150 247 aa9.65□□□□□ -0.86
REF2YDR195W YAH1Q12184 172 aaKnown RBP9.64□□□□□ -0.87
REF2YDR195W EPS1P40557 701 aa9.6□□□□□ -0.87
REF2YDR195W TIF4632P39936 914 aaKnown RBP9.56□□□□□ -0.88
REF2YDR195W BDF1P35817 686 aa9.54□□□□□ -0.88
REF2YDR195W YLR271WQ06152 274 aa9.54□□□□□ -0.88
REF2YDR195W SSP1P38871 571 aa9.53□□□□□ -0.88
REF2YDR195W TGL3P40308 642 aa9.52□□□□□ -0.89
REF2YDR195W BBC1P47068 1157 aa9.52□□□□□ -0.89
REF2YDR195W AI2P03876 854 aa9.51□□□□□ -0.89
REF2YDR195W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.46□□□□□ -0.89not detected
REF2YDR195W PSD2P53037 1138 aaKnown RBP9.38□□□□□ -0.91
REF2YDR195W MGA2P40578 1113 aa9.27□□□□□ -0.92
REF2YDR195W NSR1P27476 414 aaKnown RBP RIP-Chip data9.25□□□□□ -0.93not detected
REF2YDR195W CST9Q06032 482 aa9.2□□□□□ -0.94
REF2YDR195W BUD31P25337 157 aaPredicted RBP9.2□□□□□ -0.94
REF2YDR195W MRM1P25270 412 aa9.18□□□□□ -0.94
REF2YDR195W MST1P07236 462 aa9.17□□□□□ -0.94
REF2YDR195W YAP5P40574 245 aa9.15□□□□□ -0.94
REF2YDR195W YOR238WQ08634 303 aa9.15□□□□□ -0.94
REF2YDR195W UBP9P39967 754 aa9.11□□□□□ -0.95
REF2YDR195W RTG3P38165 486 aa9.05□□□□□ -0.96
REF2YDR195W VPS29P38759 282 aa8.99□□□□□ -0.97
REF2YDR195W YMR1P47147 688 aaKnown RBP RIP-Chip data8.98□□□□□ -0.97not detected
REF2YDR195W RCR1P38212 213 aa8.94□□□□□ -0.98
REF2YDR195W GTT3P39996 337 aa8.91□□□□□ -0.98
REF2YDR195W DBP1P24784 617 aaKnown RBP8.9□□□□□ -0.99
REF2YDR195W PIB1Q06651 286 aa8.9□□□□□ -0.99
REF2YDR195W YBL029C-AQ3E756 94 aa8.9□□□□□ -0.99
REF2YDR195W STS1P38637 319 aa8.87□□□□□ -0.99
REF2YDR195W VNX1P42839 908 aa8.86□□□□□ -0.99
REF2YDR195W YFR006WP43590 535 aa8.83□□□□□ -1
REF2YDR195W WSC3Q12215 556 aa8.82□□□□□ -1
REF2YDR195W RAM2P29703 316 aa8.81□□□□□ -1
REF2YDR195W VMA1P17255 1071 aaKnown RBP8.79□□□□□ -1
REF2YDR195W SIS1P25294 352 aaKnown RBP8.77□□□□□ -1.01
REF2YDR195W SPP1Q03012 353 aa8.77□□□□□ -1.01
REF2YDR195W MAK11P20484 414 aaKnown RBP8.76□□□□□ -1.01
REF2YDR195W SAM3Q08986 587 aa8.76□□□□□ -1.01
REF2YDR195W MSB4Q12317 492 aa8.76□□□□□ -1.01
REF2YDR195W TIF11P38912 153 aaKnown RBP8.75□□□□□ -1.01
REF2YDR195W YOL036WQ08206 761 aa8.72□□□□□ -1.01
REF2YDR195W EAP1P36041 632 aaKnown RBP8.69□□□□□ -1.02
REF2YDR195W SET4P42948 560 aa8.67□□□□□ -1.02
REF2YDR195W ULI1P43604 169 aa8.66□□□□□ -1.02
REF2YDR195W ABP1P15891 592 aaKnown RBP8.64□□□□□ -1.03
REF2YDR195W IOC2Q12072 812 aa8.64□□□□□ -1.03
REF2YDR195W MIF2P35201 549 aa8.63□□□□□ -1.03
REF2YDR195W COQ8P27697 501 aa8.62□□□□□ -1.03
REF2YDR195W GYP5Q12344 894 aa8.62□□□□□ -1.03
REF2YDR195W EDS1P38073 919 aa8.61□□□□□ -1.03
REF2YDR195W NOP53Q12080 455 aaKnown RBP8.59□□□□□ -1.03
REF2YDR195W TRP5P00931 707 aaKnown RBP8.58□□□□□ -1.04
REF2YDR195W LDB19Q12502 818 aa8.58□□□□□ -1.04
REF2YDR195W PTC3P34221 468 aaKnown RBP8.58□□□□□ -1.04
REF2YDR195W FKH1P40466 484 aa8.58□□□□□ -1.04
REF2YDR195W GRE2Q12068 342 aaKnown RBP8.57□□□□□ -1.04
REF2YDR195W HTA1P04911 132 aaKnown RBP8.54□□□□□ -1.04
REF2YDR195W HTA2P04912 132 aa8.54□□□□□ -1.04
REF2YDR195W AIR2Q12476 344 aaKnown RBP8.53□□□□□ -1.04
REF2YDR195W DCW1P36091 449 aa8.52□□□□□ -1.05
REF2YDR195W GUT1P32190 709 aa8.51□□□□□ -1.05
REF2YDR195W ATH1P48016 1211 aa8.51□□□□□ -1.05
REF2YDR195W YNL035CP53962 389 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms