RNA–Protein interactions for RNA: YNL171C

YNL171C, Transcript of Dubious open reading frame, yeastyeast

Gene YNL171C, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL171CYNL171C MTC1P47018 478 aaKnown RBP17.64■□□□□ 0.41
YNL171CYNL171C FAP1P53971 965 aa16.21■□□□□ 0.19
YNL171CYNL171C DRS1P32892 752 aaKnown RBP16.18■□□□□ 0.18
YNL171CYNL171C PRY3P47033 881 aa15.26■□□□□ 0.03
YNL171CYNL171C PRI1P10363 409 aa15.05■□□□□ -0
YNL171CYNL171C AAD16Q02895 342 aa14.97□□□□□ -0.01
YNL171CYNL171C ISW2Q08773 1120 aa14.64□□□□□ -0.07
YNL171CYNL171C RPG1P38249 964 aaKnown RBP14.56□□□□□ -0.08
YNL171CYNL171C YCK3P39962 524 aa14.49□□□□□ -0.09
YNL171CYNL171C DIP2Q12220 943 aaPredicted RBP14.29□□□□□ -0.12
YNL171CYNL171C HAA1Q12753 694 aaKnown RBP14.25□□□□□ -0.13
YNL171CYNL171C TSR3Q12094 313 aaKnown RBP14.24□□□□□ -0.13
YNL171CYNL171C RSE1Q04693 1361 aaKnown RBP13.88□□□□□ -0.19
YNL171CYNL171C AVT3P36062 692 aa13.72□□□□□ -0.21
YNL171CYNL171C MRPL32P25348 183 aa13.62□□□□□ -0.23
YNL171CYNL171C RPL17AP05740 184 aaKnown RBP13.5□□□□□ -0.25
YNL171CYNL171C RPL17BP46990 184 aaKnown RBP13.5□□□□□ -0.25
YNL171CYNL171C REB1P21538 810 aa13.43□□□□□ -0.26
YNL171CYNL171C BFR2Q06631 534 aaKnown RBP13.3□□□□□ -0.28
YNL171CYNL171C YGL015CP33199 130 aa13.13□□□□□ -0.31
YNL171CYNL171C CDC27P38042 758 aa12.96□□□□□ -0.33
YNL171CYNL171C SPT21P35209 758 aa12.91□□□□□ -0.34
YNL171CYNL171C YKR023WP36119 530 aaKnown RBP12.85□□□□□ -0.35
YNL171CYNL171C HOP09932 586 aa12.59□□□□□ -0.39
YNL171CYNL171C MAP2P38174 421 aaKnown RBP12.58□□□□□ -0.4
YNL171CYNL171C DCD1P06773 312 aa12.57□□□□□ -0.4
YNL171CYNL171C TFC8Q12308 588 aa12.56□□□□□ -0.4
YNL171CYNL171C UBP10P53874 792 aaPredicted RBP12.55□□□□□ -0.4
YNL171CYNL171C RIM101P33400 625 aa12.38□□□□□ -0.43
YNL171CYNL171C SCY1P53009 804 aa12.26□□□□□ -0.45
YNL171CYNL171C BUD31P25337 157 aaPredicted RBP12.19□□□□□ -0.46
YNL171CYNL171C BCH2P36122 765 aa12.14□□□□□ -0.47
YNL171CYNL171C SLX5P32828 619 aaKnown RBP12.08□□□□□ -0.48
YNL171CYNL171C TIF4632P39936 914 aaKnown RBP12.01□□□□□ -0.49
YNL171CYNL171C OXP1P28273 1286 aa11.99□□□□□ -0.49
YNL171CYNL171C TGL3P40308 642 aa11.98□□□□□ -0.49
YNL171CYNL171C EPS1P40557 701 aa11.82□□□□□ -0.52
YNL171CYNL171C BDF1P35817 686 aa11.78□□□□□ -0.52
YNL171CYNL171C PTP3P40048 928 aa11.75□□□□□ -0.53
YNL171CYNL171C YIL055CP40523 627 aaKnown RBP11.73□□□□□ -0.53
YNL171CYNL171C UBP9P39967 754 aa11.67□□□□□ -0.54
YNL171CYNL171C RSM7P47150 247 aa11.59□□□□□ -0.55
YNL171CYNL171C YAH1Q12184 172 aaKnown RBP11.58□□□□□ -0.56
YNL171CYNL171C SIS1P25294 352 aaKnown RBP11.56□□□□□ -0.56
YNL171CYNL171C AI2P03876 854 aa11.52□□□□□ -0.57
YNL171CYNL171C BBC1P47068 1157 aa11.49□□□□□ -0.57
YNL171CYNL171C MST1P07236 462 aa11.46□□□□□ -0.57
YNL171CYNL171C TFA1P36100 482 aa11.45□□□□□ -0.58
YNL171CYNL171C YOR238WQ08634 303 aa11.41□□□□□ -0.58
YNL171CYNL171C YLR271WQ06152 274 aa11.38□□□□□ -0.59
YNL171CYNL171C YBL029C-AQ3E756 94 aa11.36□□□□□ -0.59
YNL171CYNL171C NSR1P27476 414 aaKnown RBP RIP-Chip data11.35□□□□□ -0.59not detected
YNL171CYNL171C YAP5P40574 245 aa11.28□□□□□ -0.6
YNL171CYNL171C PSD2P53037 1138 aaKnown RBP11.22□□□□□ -0.61
YNL171CYNL171C VNX1P42839 908 aa11.21□□□□□ -0.61
YNL171CYNL171C WSC3Q12215 556 aa11.15□□□□□ -0.62
YNL171CYNL171C SSP1P38871 571 aa11.12□□□□□ -0.63
YNL171CYNL171C MRM1P25270 412 aa11.1□□□□□ -0.63
YNL171CYNL171C SPP1Q03012 353 aa11.09□□□□□ -0.63
YNL171CYNL171C PIB1Q06651 286 aa11.06□□□□□ -0.64
YNL171CYNL171C GTT3P39996 337 aa11.03□□□□□ -0.64
YNL171CYNL171C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.03□□□□□ -0.64not detected
YNL171CYNL171C TIF11P38912 153 aaKnown RBP10.98□□□□□ -0.65
YNL171CYNL171C CST9Q06032 482 aa10.97□□□□□ -0.65
YNL171CYNL171C AIR2Q12476 344 aaKnown RBP10.89□□□□□ -0.67
YNL171CYNL171C VPS29P38759 282 aa10.87□□□□□ -0.67
YNL171CYNL171C FKH1P40466 484 aa10.87□□□□□ -0.67
YNL171CYNL171C MGA2P40578 1113 aa10.86□□□□□ -0.67
YNL171CYNL171C ULI1P43604 169 aa10.84□□□□□ -0.67
YNL171CYNL171C IOC2Q12072 812 aa10.83□□□□□ -0.68
YNL171CYNL171C YMR1P47147 688 aaKnown RBP RIP-Chip data10.82□□□□□ -0.68not detected
YNL171CYNL171C LDB19Q12502 818 aa10.82□□□□□ -0.68
YNL171CYNL171C DBP1P24784 617 aaKnown RBP10.8□□□□□ -0.68
YNL171CYNL171C RTG3P38165 486 aa10.8□□□□□ -0.68
YNL171CYNL171C YFR006WP43590 535 aa10.8□□□□□ -0.68
YNL171CYNL171C STS1P38637 319 aa10.77□□□□□ -0.69
YNL171CYNL171C RCR1P38212 213 aa10.75□□□□□ -0.69
YNL171CYNL171C YOL036WQ08206 761 aa10.75□□□□□ -0.69
YNL171CYNL171C SET4P42948 560 aa10.74□□□□□ -0.69
YNL171CYNL171C MSB4Q12317 492 aa10.74□□□□□ -0.69
YNL171CYNL171C YJL171CP46992 396 aa10.73□□□□□ -0.69
YNL171CYNL171C VMA1P17255 1071 aaKnown RBP10.7□□□□□ -0.7
YNL171CYNL171C EAP1P36041 632 aaKnown RBP10.67□□□□□ -0.7
YNL171CYNL171C TRP5P00931 707 aaKnown RBP10.66□□□□□ -0.7
YNL171CYNL171C SAM3Q08986 587 aa10.63□□□□□ -0.71
YNL171CYNL171C RTG1P32607 177 aa10.61□□□□□ -0.71
YNL171CYNL171C BMT6Q12291 365 aa10.6□□□□□ -0.71
YNL171CYNL171C YNL035CP53962 389 aaKnown RBP10.52□□□□□ -0.73
YNL171CYNL171C NCR1Q12200 1170 aa10.52□□□□□ -0.73
YNL171CYNL171C SEC61P32915 480 aa10.47□□□□□ -0.73
YNL171CYNL171C GYP5Q12344 894 aa10.47□□□□□ -0.73
YNL171CYNL171C DAN4P47179 1161 aa10.42□□□□□ -0.74
YNL171CYNL171C DCW1P36091 449 aa10.41□□□□□ -0.74
YNL171CYNL171C ABP1P15891 592 aaKnown RBP10.38□□□□□ -0.75
YNL171CYNL171C HTA1P04911 132 aaKnown RBP10.37□□□□□ -0.75
YNL171CYNL171C HTA2P04912 132 aa10.37□□□□□ -0.75
YNL171CYNL171C JIP4Q03361 876 aa10.36□□□□□ -0.75
YNL171CYNL171C RAM2P29703 316 aa10.35□□□□□ -0.75
YNL171CYNL171C TFG1P41895 735 aaPredicted RBP10.33□□□□□ -0.76
YNL171CYNL171C SAP30P38429 201 aa10.31□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms